RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 USP54Q70EL1 1684 aa13.91□□□□□ -0.18
SPIDR-204ENST00000517824 CALD1Q05682 793 aaKnown RBP13.91□□□□□ -0.18
SPIDR-204ENST00000517824 MEX3CQ5U5Q3 659 aaKnown RBP13.91□□□□□ -0.18
SPIDR-204ENST00000517824 PNPLA6Q8IY17 1366 aa13.91□□□□□ -0.18
SPIDR-204ENST00000517824 PIK3C2AO00443 1686 aa13.91□□□□□ -0.18
SPIDR-204ENST00000517824 PRR36Q9H6K5 1346 aa13.9□□□□□ -0.18
SPIDR-204ENST00000517824 DCCP43146 1447 aa13.9□□□□□ -0.18
SPIDR-204ENST00000517824 ZNF772Q68DY9 489 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-204ENST00000517824 LTN1O94822 1766 aa13.9□□□□□ -0.18
SPIDR-204ENST00000517824 ACEP12821 1306 aa13.9□□□□□ -0.19
SPIDR-204ENST00000517824 TTC21AQ8NDW8 1320 aa13.9□□□□□ -0.19
SPIDR-204ENST00000517824 NUTM2FA1L443 756 aa13.89□□□□□ -0.19
SPIDR-204ENST00000517824 FCHSD2O94868 740 aa13.89□□□□□ -0.19
SPIDR-204ENST00000517824 TMPOP42166 694 aaKnown RBP13.89□□□□□ -0.19
SPIDR-204ENST00000517824 LMOD3Q0VAK6 560 aa13.89□□□□□ -0.19
SPIDR-204ENST00000517824 NGDNQ8NEJ9 315 aaKnown RBP13.89□□□□□ -0.19
SPIDR-204ENST00000517824 MST1RQ04912 1400 aa13.89□□□□□ -0.19
SPIDR-204ENST00000517824 CT47B1P0C2W7 299 aaPredicted RBP13.88□□□□□ -0.19
SPIDR-204ENST00000517824 POLKQ9UBT6 870 aa13.88□□□□□ -0.19
SPIDR-204ENST00000517824 OVOS2A0A0J9YW53 1432 aa13.88□□□□□ -0.19
SPIDR-204ENST00000517824 OVOS2Q6IE36 1432 aa13.88□□□□□ -0.19
SPIDR-204ENST00000517824 IL16Q14005 1332 aa13.88□□□□□ -0.19
SPIDR-204ENST00000517824 TTC21BQ7Z4L5 1316 aa13.88□□□□□ -0.19
SPIDR-204ENST00000517824 PLEKHG3A1L390 1219 aa13.87□□□□□ -0.19
SPIDR-204ENST00000517824 NUTM2BA6NNL0 878 aaPredicted RBP13.87□□□□□ -0.19
SPIDR-204ENST00000517824 NUTM2EB1AL46 878 aaPredicted RBP13.87□□□□□ -0.19
SPIDR-204ENST00000517824 MS4A1P11836 297 aa13.87□□□□□ -0.19
SPIDR-204ENST00000517824 PRKAR2BP31323 418 aa13.87□□□□□ -0.19
SPIDR-204ENST00000517824 RIPK4P57078 832 aa13.87□□□□□ -0.19
SPIDR-204ENST00000517824 ERICH6Q7L0X2 663 aa13.87□□□□□ -0.19
SPIDR-204ENST00000517824 NUTM2AQ8IVF1 878 aaPredicted RBP13.87□□□□□ -0.19
SPIDR-204ENST00000517824 UPF1Q92900 1129 aaKnown RBP eCLIP13.87□□□□□ -0.19
SPIDR-204ENST00000517824 SPINK5Q9NQ38 1064 aaPredicted RBP13.87□□□□□ -0.19
SPIDR-204ENST00000517824 PEAK1Q9H792 1746 aa13.87□□□□□ -0.19
SPIDR-204ENST00000517824 TCERG1O14776 1098 aaKnown RBP13.86□□□□□ -0.19
SPIDR-204ENST00000517824 CENPQQ7L2Z9 268 aaPredicted RBP13.86□□□□□ -0.19
SPIDR-204ENST00000517824 FRAT1Q92837 279 aaPredicted RBP13.86□□□□□ -0.19
SPIDR-204ENST00000517824 DDX17Q92841 729 aaKnown RBP13.86□□□□□ -0.19
SPIDR-204ENST00000517824 EMILIN1Q9Y6C2 1016 aa13.86□□□□□ -0.19
SPIDR-204ENST00000517824 RGPD1P0DJD0 1748 aa13.86□□□□□ -0.19
SPIDR-204ENST00000517824 MARF1Q9Y4F3 1742 aaKnown RBP13.85□□□□□ -0.19
SPIDR-204ENST00000517824 RXRBP28702 533 aa13.85□□□□□ -0.19
SPIDR-204ENST00000517824 PDE3AQ14432 1141 aa13.85□□□□□ -0.19
SPIDR-204ENST00000517824 FANCIQ9NVI1 1328 aa13.85□□□□□ -0.19
SPIDR-204ENST00000517824 KIF1AQ12756 1690 aa13.85□□□□□ -0.19
SPIDR-204ENST00000517824 ADGRL3Q9HAR2 1447 aa13.84□□□□□ -0.19
SPIDR-204ENST00000517824 BCAR3O75815 825 aa13.84□□□□□ -0.19
SPIDR-204ENST00000517824 C20orf194Q5TEA3 1177 aa13.84□□□□□ -0.19
SPIDR-204ENST00000517824 PLEKHF1Q96S99 279 aa13.84□□□□□ -0.19
SPIDR-204ENST00000517824 AFF2P51816 1311 aa13.84□□□□□ -0.19
SPIDR-204ENST00000517824 NHSL1Q5SYE7 1610 aa13.83□□□□□ -0.2
SPIDR-204ENST00000517824 HMOX1P09601 288 aa13.83□□□□□ -0.2
SPIDR-204ENST00000517824 AAMPQ13685 434 aa13.83□□□□□ -0.2
SPIDR-204ENST00000517824 RRS1Q15050 365 aaKnown RBP13.83□□□□□ -0.2
SPIDR-204ENST00000517824 NFE2L2Q16236 605 aa13.83□□□□□ -0.2
SPIDR-204ENST00000517824 FTSJ3Q8IY81 847 aaKnown RBP13.83□□□□□ -0.2
SPIDR-204ENST00000517824 RSPH6AQ9H0K4 717 aa13.83□□□□□ -0.2
SPIDR-204ENST00000517824 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
SPIDR-204ENST00000517824 ANP32AP39687 249 aaKnown RBP13.82□□□□□ -0.2
SPIDR-204ENST00000517824 LRRC59Q96AG4 307 aaKnown RBP13.82□□□□□ -0.2
SPIDR-204ENST00000517824 SMC4Q9NTJ3 1288 aa13.82□□□□□ -0.2
SPIDR-204ENST00000517824 RARSP54136 660 aaKnown RBP13.81□□□□□ -0.2
SPIDR-204ENST00000517824 PMFBP1Q8TBY8 1022 aa13.81□□□□□ -0.2
SPIDR-204ENST00000517824 KIF16BQ96L93 1317 aa13.81□□□□□ -0.2
SPIDR-204ENST00000517824 SOX12O15370 315 aa13.8□□□□□ -0.2
SPIDR-204ENST00000517824 IL13P35225 146 aa13.8□□□□□ -0.2
SPIDR-204ENST00000517824 ZKSCAN2Q63HK3 967 aa13.8□□□□□ -0.2
SPIDR-204ENST00000517824 TSR2Q969E8 191 aaKnown RBP13.8□□□□□ -0.2
SPIDR-204ENST00000517824 RNF216Q9NWF9 866 aaPredicted RBP13.8□□□□□ -0.2
SPIDR-204ENST00000517824 LAS1LQ9Y4W2 734 aaKnown RBP13.8□□□□□ -0.2
SPIDR-204ENST00000517824 FLT4P35916 1363 aa13.8□□□□□ -0.2
SPIDR-204ENST00000517824 C1orf167Q5SNV9 1468 aa13.8□□□□□ -0.2
SPIDR-204ENST00000517824 C8orf37Q96NL8 207 aa13.79□□□□□ -0.2
SPIDR-204ENST00000517824 BCL2L13Q9BXK5 485 aa13.79□□□□□ -0.2
SPIDR-204ENST00000517824 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
SPIDR-204ENST00000517824 SBNO1A3KN83 1393 aa13.79□□□□□ -0.2
SPIDR-204ENST00000517824 ARHGEF10O15013 1369 aa13.79□□□□□ -0.2
SPIDR-204ENST00000517824 USP31Q70CQ4 1352 aa13.79□□□□□ -0.2
SPIDR-204ENST00000517824 AMPHP49418 695 aa13.78□□□□□ -0.2
SPIDR-204ENST00000517824 GNAI1P63096 354 aa13.78□□□□□ -0.2
SPIDR-204ENST00000517824 EXOSC9Q06265 439 aaKnown RBP13.78□□□□□ -0.2
SPIDR-204ENST00000517824 IPO8O15397 1037 aaKnown RBP13.77□□□□□ -0.21
SPIDR-204ENST00000517824 FBLN1P23142 703 aa13.77□□□□□ -0.21
SPIDR-204ENST00000517824 SSH2Q76I76 1423 aa13.77□□□□□ -0.21
SPIDR-204ENST00000517824 PANK1Q8TE04 598 aa13.77□□□□□ -0.21
SPIDR-204ENST00000517824 CLUAP1Q96AJ1 413 aa13.77□□□□□ -0.21
SPIDR-204ENST00000517824 ORAI2Q96SN7 254 aa13.77□□□□□ -0.21
SPIDR-204ENST00000517824 QTRT2Q9H974 415 aaKnown RBP13.77□□□□□ -0.21
SPIDR-204ENST00000517824 COG6Q9Y2V7 657 aa13.77□□□□□ -0.21
SPIDR-204ENST00000517824 EP400Q96L91 3159 aa13.77□□□□□ -0.21
SPIDR-204ENST00000517824 RGS12O14924 1447 aa13.76□□□□□ -0.21
SPIDR-204ENST00000517824 PAK3O75914 559 aaPredicted RBP13.76□□□□□ -0.21
SPIDR-204ENST00000517824 ZNF428Q96B54 188 aa13.76□□□□□ -0.21
SPIDR-204ENST00000517824 CACNA1FO60840 1977 aa13.76□□□□□ -0.21
SPIDR-204ENST00000517824 KIF24Q5T7B8 1368 aa13.75□□□□□ -0.21
SPIDR-204ENST00000517824 SOS2Q07890 1332 aaPredicted RBP13.75□□□□□ -0.21
SPIDR-204ENST00000517824 KDM2BQ8NHM5 1336 aa13.75□□□□□ -0.21
SPIDR-204ENST00000517824 ADAMTS2O95450 1211 aa13.75□□□□□ -0.21
SPIDR-204ENST00000517824 HAP1P54257 671 aaPredicted RBP13.75□□□□□ -0.21
SPIDR-204ENST00000517824 RBM6P78332 1123 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms