RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 FBLN1P23142 703 aa15.32■□□□□ 0.04
SPIDR-203ENST00000517693 NFE2L2Q16236 605 aa15.32■□□□□ 0.04
SPIDR-203ENST00000517693 MAP3K19Q56UN5 1328 aa15.32■□□□□ 0.04
SPIDR-203ENST00000517693 PEAK1Q9H792 1746 aa15.32■□□□□ 0.04
SPIDR-203ENST00000517693 HSPA2P54652 639 aa15.31■□□□□ 0.04
SPIDR-203ENST00000517693 EIF4A2Q14240 407 aaKnown RBP15.31■□□□□ 0.04
SPIDR-203ENST00000517693 MARF1Q9Y4F3 1742 aaKnown RBP15.31■□□□□ 0.04
SPIDR-203ENST00000517693 RBM33Q96EV2 1170 aaKnown RBP15.31■□□□□ 0.04
SPIDR-203ENST00000517693 RGPD1P0DJD0 1748 aa15.31■□□□□ 0.04
SPIDR-203ENST00000517693 MST1RQ04912 1400 aa15.3■□□□□ 0.04
SPIDR-203ENST00000517693 STRCP1A6NGW2 1772 aa15.3■□□□□ 0.04
SPIDR-203ENST00000517693 STRCQ7RTU9 1775 aa15.3■□□□□ 0.04
SPIDR-203ENST00000517693 HMOX1P09601 288 aa15.29■□□□□ 0.04
SPIDR-203ENST00000517693 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
SPIDR-203ENST00000517693 PHRF1Q9P1Y6 1649 aaKnown RBP15.29■□□□□ 0.04
SPIDR-203ENST00000517693 TRIM35Q9UPQ4 493 aa15.29■□□□□ 0.04
SPIDR-203ENST00000517693 DMRT2Q9Y5R5 561 aa15.28■□□□□ 0.04
SPIDR-203ENST00000517693 TRPM3Q9HCF6 1732 aaPredicted RBP15.27■□□□□ 0.04
SPIDR-203ENST00000517693 SOX12O15370 315 aa15.27■□□□□ 0.04
SPIDR-203ENST00000517693 HSP90AB2PQ58FF8 381 aa15.27■□□□□ 0.04
SPIDR-203ENST00000517693 CERKQ8TCT0 537 aa15.27■□□□□ 0.04
SPIDR-203ENST00000517693 CCDC136Q96JN2 1154 aa15.27■□□□□ 0.04
SPIDR-203ENST00000517693 SLIT3O75094 1523 aa15.27■□□□□ 0.03
SPIDR-203ENST00000517693 NFAT5O94916 1531 aa15.27■□□□□ 0.03
SPIDR-203ENST00000517693 NPHP3Q7Z494 1330 aa15.26■□□□□ 0.03
SPIDR-203ENST00000517693 SULT6B1Q6IMI4 303 aa15.26■□□□□ 0.03
SPIDR-203ENST00000517693 ORAI2Q96SN7 254 aa15.26■□□□□ 0.03
SPIDR-203ENST00000517693 KDRP35968 1356 aa15.26■□□□□ 0.03
SPIDR-203ENST00000517693 FANCIQ9NVI1 1328 aa15.25■□□□□ 0.03
SPIDR-203ENST00000517693 FOXO3O43524 673 aa15.25■□□□□ 0.03
SPIDR-203ENST00000517693 HOXC9P31274 260 aa15.25■□□□□ 0.03
SPIDR-203ENST00000517693 ZNF428Q96B54 188 aa15.25■□□□□ 0.03
SPIDR-203ENST00000517693 LTN1O94822 1766 aa15.25■□□□□ 0.03
SPIDR-203ENST00000517693 IGSF1Q8N6C5 1336 aa15.25■□□□□ 0.03
SPIDR-203ENST00000517693 CANXP27824 592 aaKnown RBP15.24■□□□□ 0.03
SPIDR-203ENST00000517693 GNAI1P63096 354 aa15.24■□□□□ 0.03
SPIDR-203ENST00000517693 KRT28Q7Z3Y7 464 aa15.24■□□□□ 0.03
SPIDR-203ENST00000517693 NUTM2GQ5VZR2 741 aa15.24■□□□□ 0.03
SPIDR-203ENST00000517693 IFT57Q9NWB7 429 aa15.24■□□□□ 0.03
SPIDR-203ENST00000517693 USP19O94966 1318 aa15.23■□□□□ 0.03
SPIDR-203ENST00000517693 MS4A1P11836 297 aa15.23■□□□□ 0.03
SPIDR-203ENST00000517693 PDE3AQ14432 1141 aa15.23■□□□□ 0.03
SPIDR-203ENST00000517693 IP6K1Q92551 441 aa15.23■□□□□ 0.03
SPIDR-203ENST00000517693 HAP1P54257 671 aaPredicted RBP15.22■□□□□ 0.03
SPIDR-203ENST00000517693 GAS2L2Q8NHY3 880 aa15.22■□□□□ 0.03
SPIDR-203ENST00000517693 PHACTR3Q96KR7 559 aa15.22■□□□□ 0.03
SPIDR-203ENST00000517693 ALS2Q96Q42 1657 aa15.22■□□□□ 0.03
SPIDR-203ENST00000517693 RARSP54136 660 aaKnown RBP15.22■□□□□ 0.03
SPIDR-203ENST00000517693 AAMPQ13685 434 aa15.22■□□□□ 0.03
SPIDR-203ENST00000517693 B4GALNT3Q6L9W6 998 aa15.22■□□□□ 0.03
SPIDR-203ENST00000517693 EXOC6Q8TAG9 804 aa15.21■□□□□ 0.03
SPIDR-203ENST00000517693 DLG5Q8TDM6 1919 aa15.21■□□□□ 0.02
SPIDR-203ENST00000517693 PLIN1O60240 522 aa15.2■□□□□ 0.02
SPIDR-203ENST00000517693 ABCC6O95255 1503 aa15.2■□□□□ 0.02
SPIDR-203ENST00000517693 GCP02774 474 aa15.2■□□□□ 0.02
SPIDR-203ENST00000517693 XIRP1Q702N8 1843 aaKnown RBP15.19■□□□□ 0.02
SPIDR-203ENST00000517693 TNS3Q68CZ2 1445 aa15.19■□□□□ 0.02
SPIDR-203ENST00000517693 HTATSF1O43719 755 aaKnown RBP15.19■□□□□ 0.02
SPIDR-203ENST00000517693 LMOD2Q6P5Q4 547 aa15.19■□□□□ 0.02
SPIDR-203ENST00000517693 AEBP1Q8IUX7 1158 aa15.19■□□□□ 0.02
SPIDR-203ENST00000517693 CFAP44Q96MT7 982 aa15.19■□□□□ 0.02
SPIDR-203ENST00000517693 EYA1Q99502 592 aa15.19■□□□□ 0.02
SPIDR-203ENST00000517693 ALDH1L2Q3SY69 923 aa15.18■□□□□ 0.02
SPIDR-203ENST00000517693 RTF1Q92541 710 aaKnown RBP15.18■□□□□ 0.02
SPIDR-203ENST00000517693 CRBNQ96SW2 442 aa15.18■□□□□ 0.02
SPIDR-203ENST00000517693 KIF16BQ96L93 1317 aa15.18■□□□□ 0.02
SPIDR-203ENST00000517693 BCAR3O75815 825 aa15.17■□□□□ 0.02
SPIDR-203ENST00000517693 EXOSC9Q06265 439 aaKnown RBP15.17■□□□□ 0.02
SPIDR-203ENST00000517693 TSR2Q969E8 191 aaKnown RBP15.17■□□□□ 0.02
SPIDR-203ENST00000517693 ARHGEF25Q86VW2 580 aa15.17■□□□□ 0.02
SPIDR-203ENST00000517693 MED1Q15648 1581 aaPredicted RBP15.16■□□□□ 0.02
SPIDR-203ENST00000517693 ZNF853P0CG23 659 aa15.16■□□□□ 0.02
SPIDR-203ENST00000517693 SOCS7O14512 581 aa15.15■□□□□ 0.02
SPIDR-203ENST00000517693 XPCQ01831 940 aaPredicted RBP15.15■□□□□ 0.02
SPIDR-203ENST00000517693 SMC4Q9NTJ3 1288 aa15.15■□□□□ 0.02
SPIDR-203ENST00000517693 ZNF335Q9H4Z2 1342 aaPredicted RBP15.15■□□□□ 0.02
SPIDR-203ENST00000517693 PXDNQ92626 1479 aa15.15■□□□□ 0.02
SPIDR-203ENST00000517693 IPO8O15397 1037 aaKnown RBP15.15■□□□□ 0.02
SPIDR-203ENST00000517693 LAS1LQ9Y4W2 734 aaKnown RBP15.15■□□□□ 0.02
SPIDR-203ENST00000517693 ZKSCAN2Q63HK3 967 aa15.14■□□□□ 0.01
SPIDR-203ENST00000517693 PLEKHG2Q9H7P9 1386 aa15.13■□□□□ 0.01
SPIDR-203ENST00000517693 BRPF1P55201 1214 aaPredicted RBP15.13■□□□□ 0.01
SPIDR-203ENST00000517693 FRAT1Q92837 279 aaPredicted RBP15.13■□□□□ 0.01
SPIDR-203ENST00000517693 SPATA31A3Q5VYP0 1347 aa15.13■□□□□ 0.01
SPIDR-203ENST00000517693 C20orf194Q5TEA3 1177 aa15.13■□□□□ 0.01
SPIDR-203ENST00000517693 ILDR2Q71H61 639 aa15.13■□□□□ 0.01
SPIDR-203ENST00000517693 NCAPD2Q15021 1401 aa15.12■□□□□ 0.01
SPIDR-203ENST00000517693 CAMTA1Q9Y6Y1 1673 aa15.12■□□□□ 0.01
SPIDR-203ENST00000517693 BRINP3Q76B58 766 aa15.12■□□□□ 0.01
SPIDR-203ENST00000517693 FTSJ3Q8IY81 847 aaKnown RBP15.12■□□□□ 0.01
SPIDR-203ENST00000517693 LTV1Q96GA3 475 aaPredicted RBP15.12■□□□□ 0.01
SPIDR-203ENST00000517693 SLAIN2Q9P270 581 aa15.12■□□□□ 0.01
SPIDR-203ENST00000517693 MAP3K5Q99683 1374 aa15.11■□□□□ 0.01
SPIDR-203ENST00000517693 FAM208AQ9UK61 1670 aaKnown RBP15.11■□□□□ 0.01
SPIDR-203ENST00000517693 ZBTB7CA1YPR0 619 aa15.11■□□□□ 0.01
SPIDR-203ENST00000517693 GNAT3A8MTJ3 354 aa15.11■□□□□ 0.01
SPIDR-203ENST00000517693 MTHFSDQ2M296 383 aaKnown RBP15.11■□□□□ 0.01
SPIDR-203ENST00000517693 MBIPQ9NS73 344 aa15.11■□□□□ 0.01
SPIDR-203ENST00000517693 BABAM1Q9NWV8 329 aa15.11■□□□□ 0.01
SPIDR-203ENST00000517693 KIAA0232Q92628 1395 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms