RNA–Protein interactions for RNA: ENST00000515764.2

SMIM20-203, Transcript of small integral membrane protein 20, humanhuman

TSL 5

Gene SMIM20, Length 773 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-203ENST00000515764 ATP7BP35670 1465 aa11.59□□□□□ -0.55
SMIM20-203ENST00000515764 GJD4Q96KN9 370 aaPredicted RBP11.59□□□□□ -0.55
SMIM20-203ENST00000515764 NRAPQ86VF7 1730 aa11.59□□□□□ -0.55
SMIM20-203ENST00000515764 MINK1Q8N4C8 1332 aaPredicted RBP11.59□□□□□ -0.55
SMIM20-203ENST00000515764 PRR36Q9H6K5 1346 aa11.58□□□□□ -0.56
SMIM20-203ENST00000515764 RALGAPBQ86X10 1494 aa11.57□□□□□ -0.56
SMIM20-203ENST00000515764 ZNF467Q7Z7K2 595 aaPredicted RBP11.57□□□□□ -0.56
SMIM20-203ENST00000515764 CCDC125Q86Z20 511 aa11.57□□□□□ -0.56
SMIM20-203ENST00000515764 PMFBP1Q8TBY8 1022 aa11.57□□□□□ -0.56
SMIM20-203ENST00000515764 HIRIP3Q9BW71 556 aaPredicted RBP11.57□□□□□ -0.56
SMIM20-203ENST00000515764 BRWD3Q6RI45 1802 aa11.57□□□□□ -0.56
SMIM20-203ENST00000515764 VPS72Q15906 364 aa11.56□□□□□ -0.56
SMIM20-203ENST00000515764 PHRF1Q9P1Y6 1649 aaKnown RBP11.56□□□□□ -0.56
SMIM20-203ENST00000515764 QRICH2Q9H0J4 1663 aa11.55□□□□□ -0.56
SMIM20-203ENST00000515764 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
SMIM20-203ENST00000515764 LMOD2Q6P5Q4 547 aa11.55□□□□□ -0.56
SMIM20-203ENST00000515764 NGDNQ8NEJ9 315 aaKnown RBP11.55□□□□□ -0.56
SMIM20-203ENST00000515764 TRPM1Q7Z4N2 1603 aa11.55□□□□□ -0.56
SMIM20-203ENST00000515764 POLR3AO14802 1390 aaPredicted RBP11.54□□□□□ -0.56
SMIM20-203ENST00000515764 CABLES1Q8TDN4 633 aa11.54□□□□□ -0.56
SMIM20-203ENST00000515764 NUDT16Q96DE0 195 aaKnown RBP11.54□□□□□ -0.56
SMIM20-203ENST00000515764 RIOK3O14730 519 aaKnown RBP11.53□□□□□ -0.56
SMIM20-203ENST00000515764 ONECUT3O60422 494 aaPredicted RBP11.53□□□□□ -0.56
SMIM20-203ENST00000515764 BRD4O60885 1362 aaPredicted RBP11.53□□□□□ -0.56
SMIM20-203ENST00000515764 CDK19Q9BWU1 502 aa11.52□□□□□ -0.57
SMIM20-203ENST00000515764 BMP2KQ9NSY1 1161 aaPredicted RBP11.52□□□□□ -0.57
SMIM20-203ENST00000515764 PLEKHG3A1L390 1219 aa11.51□□□□□ -0.57
SMIM20-203ENST00000515764 CENPJQ9HC77 1338 aaPredicted RBP11.51□□□□□ -0.57
SMIM20-203ENST00000515764 BLMP54132 1417 aaPredicted RBP11.51□□□□□ -0.57
SMIM20-203ENST00000515764 FAM83GA6ND36 823 aa11.5□□□□□ -0.57
SMIM20-203ENST00000515764 TIE1P35590 1138 aa11.5□□□□□ -0.57
SMIM20-203ENST00000515764 NRKQ7Z2Y5 1582 aa11.5□□□□□ -0.57
SMIM20-203ENST00000515764 THSD7AQ9UPZ6 1657 aa11.49□□□□□ -0.57
SMIM20-203ENST00000515764 TMEM132AQ24JP5 1023 aa11.49□□□□□ -0.57
SMIM20-203ENST00000515764 NBPF1Q3BBV0 1214 aa11.49□□□□□ -0.57
SMIM20-203ENST00000515764 SEPT12Q8IYM1 358 aa11.49□□□□□ -0.57
SMIM20-203ENST00000515764 HS6ST3Q8IZP7 471 aa11.49□□□□□ -0.57
SMIM20-203ENST00000515764 DCBLD2Q96PD2 775 aa11.49□□□□□ -0.57
SMIM20-203ENST00000515764 ACEP12821 1306 aa11.49□□□□□ -0.57
SMIM20-203ENST00000515764 TTLL13PA6NNM8 815 aa11.48□□□□□ -0.57
SMIM20-203ENST00000515764 ATMINO43313 823 aaPredicted RBP11.48□□□□□ -0.57
SMIM20-203ENST00000515764 NBPF8Q3BBV2 869 aa11.48□□□□□ -0.57
SMIM20-203ENST00000515764 ASTLQ6HA08 431 aaPredicted RBP11.48□□□□□ -0.57
SMIM20-203ENST00000515764 L3MBTL2Q969R5 705 aa11.48□□□□□ -0.57
SMIM20-203ENST00000515764 BTG4Q9NY30 223 aa11.48□□□□□ -0.57
SMIM20-203ENST00000515764 CCDC9Q9Y3X0 531 aaKnown RBP11.48□□□□□ -0.57
SMIM20-203ENST00000515764 PPIP5K1Q6PFW1 1433 aa11.48□□□□□ -0.57
SMIM20-203ENST00000515764 RGPD1P0DJD0 1748 aa11.48□□□□□ -0.57
SMIM20-203ENST00000515764 PSEN1P49768 467 aa11.47□□□□□ -0.57
SMIM20-203ENST00000515764 PDAP1Q13442 181 aaKnown RBP11.47□□□□□ -0.57
SMIM20-203ENST00000515764 TMEM106CQ9BVX2 250 aa11.47□□□□□ -0.57
SMIM20-203ENST00000515764 PRDM11Q9NQV5 511 aa11.47□□□□□ -0.57
SMIM20-203ENST00000515764 AKAP12Q02952 1782 aa11.46□□□□□ -0.57
SMIM20-203ENST00000515764 LMO7Q8WWI1 1683 aa11.46□□□□□ -0.57
SMIM20-203ENST00000515764 CPDO75976 1380 aa11.46□□□□□ -0.57
SMIM20-203ENST00000515764 EP400Q96L91 3159 aa11.46□□□□□ -0.57
SMIM20-203ENST00000515764 SPATA31A5Q5VU36 1347 aa11.46□□□□□ -0.57
SMIM20-203ENST00000515764 SPATA31A7Q8IWB4 1347 aa11.46□□□□□ -0.57
SMIM20-203ENST00000515764 ATN1P54259 1190 aaPredicted RBP11.46□□□□□ -0.57
SMIM20-203ENST00000515764 SRPK2P78362 688 aaKnown RBP11.46□□□□□ -0.57
SMIM20-203ENST00000515764 KRT27Q7Z3Y8 459 aa11.46□□□□□ -0.57
SMIM20-203ENST00000515764 KIAA0232Q92628 1395 aa11.45□□□□□ -0.58
SMIM20-203ENST00000515764 USP19O94966 1318 aa11.45□□□□□ -0.58
SMIM20-203ENST00000515764 PELP1Q8IZL8 1130 aaKnown RBP11.45□□□□□ -0.58
SMIM20-203ENST00000515764 ROCK2O75116 1388 aaKnown RBP11.44□□□□□ -0.58
SMIM20-203ENST00000515764 EVC2Q86UK5 1308 aa11.44□□□□□ -0.58
SMIM20-203ENST00000515764 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.44□□□□□ -0.58
SMIM20-203ENST00000515764 SF3B2Q13435 895 aaKnown RBP11.44□□□□□ -0.58
SMIM20-203ENST00000515764 ZFP91Q96JP5 570 aaPredicted RBP11.44□□□□□ -0.58
SMIM20-203ENST00000515764 USP6P35125 1406 aa11.43□□□□□ -0.58
SMIM20-203ENST00000515764 SBNO2Q9Y2G9 1366 aa11.43□□□□□ -0.58
SMIM20-203ENST00000515764 FAM98CQ17RN3 349 aaKnown RBP11.43□□□□□ -0.58
SMIM20-203ENST00000515764 NLRP13Q86W25 1043 aa11.43□□□□□ -0.58
SMIM20-203ENST00000515764 ABTB2Q8N961 1025 aa11.43□□□□□ -0.58
SMIM20-203ENST00000515764 SIN3AQ96ST3 1273 aa11.43□□□□□ -0.58
SMIM20-203ENST00000515764 SLIT3O75094 1523 aa11.43□□□□□ -0.58
SMIM20-203ENST00000515764 PIK3C2AO00443 1686 aa11.43□□□□□ -0.58
SMIM20-203ENST00000515764 SPATA31A1Q5TZJ5 1347 aa11.42□□□□□ -0.58
SMIM20-203ENST00000515764 CABP2Q9NPB3 220 aa11.42□□□□□ -0.58
SMIM20-203ENST00000515764 MON2Q7Z3U7 1717 aa11.42□□□□□ -0.58
SMIM20-203ENST00000515764 TNS1Q9HBL0 1735 aaKnown RBP11.42□□□□□ -0.58
SMIM20-203ENST00000515764 SSH2Q76I76 1423 aa11.42□□□□□ -0.58
SMIM20-203ENST00000515764 PARP4Q9UKK3 1724 aaKnown RBP11.41□□□□□ -0.58
SMIM20-203ENST00000515764 CAMTA1Q9Y6Y1 1673 aa11.41□□□□□ -0.58
SMIM20-203ENST00000515764 A0A0G2JS52 829 aa11.41□□□□□ -0.58
SMIM20-203ENST00000515764 MYT1Q01538 1121 aa11.41□□□□□ -0.58
SMIM20-203ENST00000515764 HOMEZQ8IX15 550 aa11.41□□□□□ -0.58
SMIM20-203ENST00000515764 USP54Q70EL1 1684 aa11.4□□□□□ -0.58
SMIM20-203ENST00000515764 ZC3H6P61129 1189 aaKnown RBP11.4□□□□□ -0.58
SMIM20-203ENST00000515764 NEUROD1Q13562 356 aa11.4□□□□□ -0.58
SMIM20-203ENST00000515764 BARGINQ6ZT62 677 aa11.4□□□□□ -0.58
SMIM20-203ENST00000515764 CABP1Q9NZU7 370 aa11.4□□□□□ -0.58
SMIM20-203ENST00000515764 DISP2A7MBM2 1401 aa11.4□□□□□ -0.58
SMIM20-203ENST00000515764 WNK3Q9BYP7 1800 aa11.39□□□□□ -0.59
SMIM20-203ENST00000515764 COL5A2P05997 1499 aaPredicted RBP11.39□□□□□ -0.59
SMIM20-203ENST00000515764 GCP02774 474 aa11.39□□□□□ -0.59
SMIM20-203ENST00000515764 BAG6P46379 1132 aa11.39□□□□□ -0.59
SMIM20-203ENST00000515764 CHRNA2Q15822 529 aa11.39□□□□□ -0.59
SMIM20-203ENST00000515764 NUTM2GQ5VZR2 741 aa11.39□□□□□ -0.59
SMIM20-203ENST00000515764 TRIM35Q9UPQ4 493 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms