RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 ESCO1Q5FWF5 840 aa20.03■□□□□ 0.8
THUMPD3-210ENST00000515662 TSR2Q969E8 191 aaKnown RBP20.03■□□□□ 0.8
THUMPD3-210ENST00000515662 RGPD1P0DJD0 1748 aa20.02■□□□□ 0.8
THUMPD3-210ENST00000515662 PAK3O75914 559 aaPredicted RBP20.02■□□□□ 0.8
THUMPD3-210ENST00000515662 ABTB2Q8N961 1025 aa20.02■□□□□ 0.8
THUMPD3-210ENST00000515662 FLT4P35916 1363 aa20.02■□□□□ 0.79
THUMPD3-210ENST00000515662 NUTM2GQ5VZR2 741 aa20.01■□□□□ 0.79
THUMPD3-210ENST00000515662 CT47B1P0C2W7 299 aaPredicted RBP20■□□□□ 0.79
THUMPD3-210ENST00000515662 SULT6B1Q6IMI4 303 aa20■□□□□ 0.79
THUMPD3-210ENST00000515662 AEBP1Q8IUX7 1158 aa20■□□□□ 0.79
THUMPD3-210ENST00000515662 PSME1Q06323 249 aa19.99■□□□□ 0.79
THUMPD3-210ENST00000515662 AMPHP49418 695 aa19.98■□□□□ 0.79
THUMPD3-210ENST00000515662 EXOSC9Q06265 439 aaKnown RBP19.98■□□□□ 0.79
THUMPD3-210ENST00000515662 PDE3AQ14432 1141 aa19.98■□□□□ 0.79
THUMPD3-210ENST00000515662 KIF24Q5T7B8 1368 aa19.97■□□□□ 0.79
THUMPD3-210ENST00000515662 ORAI2Q96SN7 254 aa19.97■□□□□ 0.79
THUMPD3-210ENST00000515662 ARHGEF10O15013 1369 aa19.97■□□□□ 0.79
THUMPD3-210ENST00000515662 C19orf44Q9H6X5 657 aa19.97■□□□□ 0.79
THUMPD3-210ENST00000515662 HSPA2P54652 639 aa19.96■□□□□ 0.79
THUMPD3-210ENST00000515662 CALD1Q05682 793 aaKnown RBP19.96■□□□□ 0.79
THUMPD3-210ENST00000515662 LMOD3Q0VAK6 560 aa19.96■□□□□ 0.79
THUMPD3-210ENST00000515662 DLG5Q8TDM6 1919 aa19.95■□□□□ 0.78
THUMPD3-210ENST00000515662 CANXP27824 592 aaKnown RBP19.95■□□□□ 0.78
THUMPD3-210ENST00000515662 THUMPD2Q9BTF0 503 aaKnown RBP19.95■□□□□ 0.78
THUMPD3-210ENST00000515662 STRCP1A6NGW2 1772 aa19.95■□□□□ 0.78
THUMPD3-210ENST00000515662 KDM4FA0A1W2PPD8 638 aa19.94■□□□□ 0.78
THUMPD3-210ENST00000515662 FRAT1Q92837 279 aaPredicted RBP19.94■□□□□ 0.78
THUMPD3-210ENST00000515662 BCL2L13Q9BXK5 485 aa19.94■□□□□ 0.78
THUMPD3-210ENST00000515662 HOXC9P31274 260 aa19.93■□□□□ 0.78
THUMPD3-210ENST00000515662 C1orf167Q5SNV9 1468 aa19.93■□□□□ 0.78
THUMPD3-210ENST00000515662 FOXO3O43524 673 aa19.92■□□□□ 0.78
THUMPD3-210ENST00000515662 TMEM94Q12767 1356 aa19.92■□□□□ 0.78
THUMPD3-210ENST00000515662 KDRP35968 1356 aa19.92■□□□□ 0.78
THUMPD3-210ENST00000515662 PANK1Q8TE04 598 aa19.92■□□□□ 0.78
THUMPD3-210ENST00000515662 IFT57Q9NWB7 429 aa19.92■□□□□ 0.78
THUMPD3-210ENST00000515662 NFAT5O94916 1531 aa19.91■□□□□ 0.78
THUMPD3-210ENST00000515662 IGSF1Q8N6C5 1336 aa19.91■□□□□ 0.78
THUMPD3-210ENST00000515662 ZNF853P0CG23 659 aa19.91■□□□□ 0.78
THUMPD3-210ENST00000515662 LAS1LQ9Y4W2 734 aaKnown RBP19.91■□□□□ 0.78
THUMPD3-210ENST00000515662 NCOA3Q9Y6Q9 1424 aa19.91■□□□□ 0.78
THUMPD3-210ENST00000515662 GNAI1P63096 354 aa19.91■□□□□ 0.78
THUMPD3-210ENST00000515662 EYA1Q99502 592 aa19.91■□□□□ 0.78
THUMPD3-210ENST00000515662 KIF1AQ12756 1690 aa19.9■□□□□ 0.78
THUMPD3-210ENST00000515662 RTL1A6NKG5 1358 aa19.9■□□□□ 0.78
THUMPD3-210ENST00000515662 FAM83GA6ND36 823 aa19.9■□□□□ 0.78
THUMPD3-210ENST00000515662 LMTK3Q96Q04 1460 aa19.89■□□□□ 0.78
THUMPD3-210ENST00000515662 DCCP43146 1447 aa19.89■□□□□ 0.77
THUMPD3-210ENST00000515662 XPCQ01831 940 aaPredicted RBP19.88■□□□□ 0.77
THUMPD3-210ENST00000515662 SSH1Q8WYL5 1049 aa19.88■□□□□ 0.77
THUMPD3-210ENST00000515662 LTN1O94822 1766 aa19.88■□□□□ 0.77
THUMPD3-210ENST00000515662 TRPM3Q9HCF6 1732 aaPredicted RBP19.88■□□□□ 0.77
THUMPD3-210ENST00000515662 MSH5O43196 834 aa19.88■□□□□ 0.77
THUMPD3-210ENST00000515662 SMC4Q9NTJ3 1288 aa19.88■□□□□ 0.77
THUMPD3-210ENST00000515662 COG6Q9Y2V7 657 aa19.88■□□□□ 0.77
THUMPD3-210ENST00000515662 KDM2BQ8NHM5 1336 aa19.88■□□□□ 0.77
THUMPD3-210ENST00000515662 MST1RQ04912 1400 aa19.88■□□□□ 0.77
THUMPD3-210ENST00000515662 ATF3P18847 181 aa19.87■□□□□ 0.77
THUMPD3-210ENST00000515662 KCNH5Q8NCM2 988 aa19.87■□□□□ 0.77
THUMPD3-210ENST00000515662 CFAP44Q96MT7 982 aa19.87■□□□□ 0.77
THUMPD3-210ENST00000515662 DCTN1Q14203 1278 aa19.87■□□□□ 0.77
THUMPD3-210ENST00000515662 MBIPQ9NS73 344 aa19.87■□□□□ 0.77
THUMPD3-210ENST00000515662 TNNQ9UQP3 1299 aa19.87■□□□□ 0.77
THUMPD3-210ENST00000515662 RLBP1P12271 317 aa19.86■□□□□ 0.77
THUMPD3-210ENST00000515662 ZKSCAN2Q63HK3 967 aa19.86■□□□□ 0.77
THUMPD3-210ENST00000515662 KRT28Q7Z3Y7 464 aa19.86■□□□□ 0.77
THUMPD3-210ENST00000515662 IP6K1Q92551 441 aa19.85■□□□□ 0.77
THUMPD3-210ENST00000515662 SLIT3O75094 1523 aa19.85■□□□□ 0.77
THUMPD3-210ENST00000515662 ALDH1L2Q3SY69 923 aa19.85■□□□□ 0.77
THUMPD3-210ENST00000515662 ZNF428Q96B54 188 aa19.85■□□□□ 0.77
THUMPD3-210ENST00000515662 CENPQQ7L2Z9 268 aaPredicted RBP19.84■□□□□ 0.77
THUMPD3-210ENST00000515662 STRCQ7RTU9 1775 aa19.84■□□□□ 0.77
THUMPD3-210ENST00000515662 PHRF1Q9P1Y6 1649 aaKnown RBP19.84■□□□□ 0.77
THUMPD3-210ENST00000515662 MTHFSDQ2M296 383 aaKnown RBP19.84■□□□□ 0.77
THUMPD3-210ENST00000515662 LTV1Q96GA3 475 aaPredicted RBP19.83■□□□□ 0.76
THUMPD3-210ENST00000515662 VAMP4O75379 141 aa19.82■□□□□ 0.76
THUMPD3-210ENST00000515662 MCM10Q7L590 875 aa19.82■□□□□ 0.76
THUMPD3-210ENST00000515662 CLUAP1Q96AJ1 413 aa19.82■□□□□ 0.76
THUMPD3-210ENST00000515662 USP19O94966 1318 aa19.82■□□□□ 0.76
THUMPD3-210ENST00000515662 GCP02774 474 aa19.81■□□□□ 0.76
THUMPD3-210ENST00000515662 MS4A1P11836 297 aa19.81■□□□□ 0.76
THUMPD3-210ENST00000515662 AAMPQ13685 434 aa19.81■□□□□ 0.76
THUMPD3-210ENST00000515662 CADPS2Q86UW7 1296 aa19.81■□□□□ 0.76
THUMPD3-210ENST00000515662 DZIP1LQ8IYY4 767 aaKnown RBP19.81■□□□□ 0.76
THUMPD3-210ENST00000515662 TSPYL6Q8N831 410 aa19.81■□□□□ 0.76
THUMPD3-210ENST00000515662 NOB1Q9ULX3 412 aaKnown RBP19.81■□□□□ 0.76
THUMPD3-210ENST00000515662 LMOD2Q6P5Q4 547 aa19.8■□□□□ 0.76
THUMPD3-210ENST00000515662 KIF16BQ96L93 1317 aa19.8■□□□□ 0.76
THUMPD3-210ENST00000515662 TRIM27P14373 513 aa19.8■□□□□ 0.76
THUMPD3-210ENST00000515662 BRPF1P55201 1214 aaPredicted RBP19.8■□□□□ 0.76
THUMPD3-210ENST00000515662 GAS2L2Q8NHY3 880 aa19.8■□□□□ 0.76
THUMPD3-210ENST00000515662 ATF7IPQ6VMQ6 1270 aa19.79■□□□□ 0.76
THUMPD3-210ENST00000515662 CRB1P82279 1406 aa19.79■□□□□ 0.76
THUMPD3-210ENST00000515662 CHL1O00533 1208 aa19.79■□□□□ 0.76
THUMPD3-210ENST00000515662 TCERG1O14776 1098 aaKnown RBP19.79■□□□□ 0.76
THUMPD3-210ENST00000515662 MVPQ14764 893 aaKnown RBP19.79■□□□□ 0.76
THUMPD3-210ENST00000515662 ARHGEF25Q86VW2 580 aa19.79■□□□□ 0.76
THUMPD3-210ENST00000515662 FTSJ3Q8IY81 847 aaKnown RBP19.79■□□□□ 0.76
THUMPD3-210ENST00000515662 MSH6P52701 1360 aa19.79■□□□□ 0.76
THUMPD3-210ENST00000515662 ALS2Q96Q42 1657 aa19.79■□□□□ 0.76
THUMPD3-210ENST00000515662 C8orf58Q8NAV2 365 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms