RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 ERBINQ96RT1 1412 aa19.09■□□□□ 0.65
TRIM41-207ENST00000515223 KDM4AO75164 1064 aa19.09■□□□□ 0.65
TRIM41-207ENST00000515223 SLC4A2P04920 1241 aa19.08■□□□□ 0.65
TRIM41-207ENST00000515223 SYCP1Q15431 976 aa19.08■□□□□ 0.65
TRIM41-207ENST00000515223 SRCIN1Q9C0H9 1055 aa19.08■□□□□ 0.65
TRIM41-207ENST00000515223 RTEL1-TNFRSF6BF6WH68 1400 aa19.08■□□□□ 0.65
TRIM41-207ENST00000515223 CCT4P50991 539 aaKnown RBP19.08■□□□□ 0.65
TRIM41-207ENST00000515223 PTPN23Q9H3S7 1636 aa19.08■□□□□ 0.64
TRIM41-207ENST00000515223 ZSCAN29Q8IWY8 852 aaPredicted RBP19.07■□□□□ 0.64
TRIM41-207ENST00000515223 TRIM22Q8IYM9 498 aa19.07■□□□□ 0.64
TRIM41-207ENST00000515223 ANKRD30BQ9BXX2 1392 aa19.07■□□□□ 0.64
TRIM41-207ENST00000515223 TMOD2Q9NZR1 351 aa19.07■□□□□ 0.64
TRIM41-207ENST00000515223 PIP4K2AP48426 406 aaPredicted RBP19.07■□□□□ 0.64
TRIM41-207ENST00000515223 RBM10P98175 930 aaKnown RBP19.07■□□□□ 0.64
TRIM41-207ENST00000515223 SOGA3Q5TF21 947 aa19.07■□□□□ 0.64
TRIM41-207ENST00000515223 MAGEC2Q9UBF1 373 aaPredicted RBP19.06■□□□□ 0.64
TRIM41-207ENST00000515223 C9orf84Q5VXU9 1444 aa19.06■□□□□ 0.64
TRIM41-207ENST00000515223 MCM2P49736 904 aa19.06■□□□□ 0.64
TRIM41-207ENST00000515223 HECW1Q76N89 1606 aa19.06■□□□□ 0.64
TRIM41-207ENST00000515223 NOB1Q9ULX3 412 aaKnown RBP19.06■□□□□ 0.64
TRIM41-207ENST00000515223 KINO60870 393 aaKnown RBP19.05■□□□□ 0.64
TRIM41-207ENST00000515223 AK7Q96M32 723 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 GRPEL1Q9HAV7 217 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 FILIP1LQ4L180 1135 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 MYL6BP14649 208 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 JMYQ8N9B5 988 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 ACBD3Q9H3P7 528 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 PDILTQ8N807 584 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 MNS1Q8NEH6 495 aa19.05■□□□□ 0.64
TRIM41-207ENST00000515223 WDHD1O75717 1129 aaPredicted RBP19.05■□□□□ 0.64
TRIM41-207ENST00000515223 ZNF396Q96N95 335 aaPredicted RBP19.04■□□□□ 0.64
TRIM41-207ENST00000515223 PATL2C9JE40 543 aaKnown RBP19.04■□□□□ 0.64
TRIM41-207ENST00000515223 SLFN5Q08AF3 891 aa19.04■□□□□ 0.64
TRIM41-207ENST00000515223 SLC12A5Q9H2X9 1139 aa19.04■□□□□ 0.64
TRIM41-207ENST00000515223 CEP126Q9P2H0 1117 aa19.04■□□□□ 0.64
TRIM41-207ENST00000515223 RPGRIP1LQ68CZ1 1315 aa19.04■□□□□ 0.64
TRIM41-207ENST00000515223 STARD3NLO95772 234 aa19.04■□□□□ 0.64
TRIM41-207ENST00000515223 GCC1Q96CN9 775 aa19.04■□□□□ 0.64
TRIM41-207ENST00000515223 MYO6Q9UM54 1294 aa19.04■□□□□ 0.64
TRIM41-207ENST00000515223 BCL11BQ9C0K0 894 aaPredicted RBP19.03■□□□□ 0.64
TRIM41-207ENST00000515223 RAPGEF3O95398 923 aa19.03■□□□□ 0.64
TRIM41-207ENST00000515223 MCM4P33991 863 aa19.03■□□□□ 0.64
TRIM41-207ENST00000515223 KCNH5Q8NCM2 988 aa19.03■□□□□ 0.64
TRIM41-207ENST00000515223 IGHMBP2P38935 993 aaKnown RBP19.02■□□□□ 0.64
TRIM41-207ENST00000515223 PDCL3Q9H2J4 239 aa19.02■□□□□ 0.64
TRIM41-207ENST00000515223 PRPF40AO75400 957 aaKnown RBP19.02■□□□□ 0.64
TRIM41-207ENST00000515223 STK38Q15208 465 aa19.02■□□□□ 0.64
TRIM41-207ENST00000515223 SIL1Q9H173 461 aa19.02■□□□□ 0.64
TRIM41-207ENST00000515223 MPHOSPH10O00566 681 aaKnown RBP19.02■□□□□ 0.64
TRIM41-207ENST00000515223 NESP48681 1621 aa19.02■□□□□ 0.64
TRIM41-207ENST00000515223 IFT57Q9NWB7 429 aa19.02■□□□□ 0.63
TRIM41-207ENST00000515223 CCDC69A6NI79 296 aa19.01■□□□□ 0.63
TRIM41-207ENST00000515223 NEK4P51957 841 aa19.01■□□□□ 0.63
TRIM41-207ENST00000515223 ZNF652Q9Y2D9 606 aa19.01■□□□□ 0.63
TRIM41-207ENST00000515223 MAP3K1Q13233 1512 aa19.01■□□□□ 0.63
TRIM41-207ENST00000515223 ARGLU1Q9NWB6 273 aaPredicted RBP19.01■□□□□ 0.63
TRIM41-207ENST00000515223 POLA1P09884 1462 aaPredicted RBP19.01■□□□□ 0.63
TRIM41-207ENST00000515223 ZC3H6P61129 1189 aaKnown RBP19.01■□□□□ 0.63
TRIM41-207ENST00000515223 TEX35Q5T0J7 233 aa19.01■□□□□ 0.63
TRIM41-207ENST00000515223 SMARCE1Q969G3 411 aa19.01■□□□□ 0.63
TRIM41-207ENST00000515223 BTBD11A6QL63 1104 aa19■□□□□ 0.63
TRIM41-207ENST00000515223 BICDL1Q6ZP65 573 aa19■□□□□ 0.63
TRIM41-207ENST00000515223 ANKRD1Q15327 319 aa19■□□□□ 0.63
TRIM41-207ENST00000515223 CAGE1Q8TC20 777 aa19■□□□□ 0.63
TRIM41-207ENST00000515223 ATAD2Q6PL18 1390 aa18.99■□□□□ 0.63
TRIM41-207ENST00000515223 LRRCC1Q9C099 1032 aa18.99■□□□□ 0.63
TRIM41-207ENST00000515223 ZNF771Q7L3S4 317 aaPredicted RBP18.99■□□□□ 0.63
TRIM41-207ENST00000515223 MVPQ14764 893 aaKnown RBP18.99■□□□□ 0.63
TRIM41-207ENST00000515223 RAI14Q9P0K7 980 aa18.99■□□□□ 0.63
TRIM41-207ENST00000515223 PKNOX2Q96KN3 472 aa18.99■□□□□ 0.63
TRIM41-207ENST00000515223 FKBP4Q02790 459 aaKnown RBP eCLIP18.98■□□□□ 0.63
TRIM41-207ENST00000515223 XPCQ01831 940 aaPredicted RBP18.98■□□□□ 0.63
TRIM41-207ENST00000515223 CYP46A1Q9Y6A2 500 aa18.98■□□□□ 0.63
TRIM41-207ENST00000515223 EPRSP07814 1512 aaKnown RBP18.98■□□□□ 0.63
TRIM41-207ENST00000515223 TOPBP1Q92547 1522 aa18.98■□□□□ 0.63
TRIM41-207ENST00000515223 LETM1O95202 739 aaPredicted RBP18.98■□□□□ 0.63
TRIM41-207ENST00000515223 STIM1Q13586 685 aa18.98■□□□□ 0.63
TRIM41-207ENST00000515223 ZHX3Q9H4I2 956 aa18.98■□□□□ 0.63
TRIM41-207ENST00000515223 CCDC39Q9UFE4 941 aa18.98■□□□□ 0.63
TRIM41-207ENST00000515223 CTNNA3Q9UI47 895 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 TDO2P48775 406 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 HSP90B2PQ58FF3 399 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 NUP133Q8WUM0 1156 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 LRP2BPQ9P2M1 347 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 NOL7Q9UMY1 257 aaKnown RBP18.97■□□□□ 0.63
TRIM41-207ENST00000515223 CT47B1P0C2W7 299 aaPredicted RBP18.97■□□□□ 0.63
TRIM41-207ENST00000515223 UBAC1Q9BSL1 405 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 IFT140Q96RY7 1462 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 ZPR1O75312 459 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 STK11IPQ8N1F8 1099 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 MPNDQ8N594 471 aa18.97■□□□□ 0.63
TRIM41-207ENST00000515223 MRC2Q9UBG0 1479 aa18.96■□□□□ 0.63
TRIM41-207ENST00000515223 BMP2KQ9NSY1 1161 aaPredicted RBP18.96■□□□□ 0.63
TRIM41-207ENST00000515223 CCDC61Q9Y6R9 512 aa18.96■□□□□ 0.63
TRIM41-207ENST00000515223 RABEP1Q15276 862 aa18.96■□□□□ 0.63
TRIM41-207ENST00000515223 MBD3O95983 291 aa18.95■□□□□ 0.62
TRIM41-207ENST00000515223 ZNHIT6Q9NWK9 470 aaKnown RBP18.95■□□□□ 0.62
TRIM41-207ENST00000515223 LUC7LQ9NQ29 371 aaKnown RBP18.95■□□□□ 0.62
TRIM41-207ENST00000515223 PTPRKQ15262 1439 aa18.94■□□□□ 0.62
TRIM41-207ENST00000515223 CDKL5O76039 1030 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms