RNA–Protein interactions for RNA: ENST00000515064.5

LDB2-216, Transcript of LIM domain binding 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LDB2, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-216ENST00000515064 ERICH4A6NGS2 130 aa8.77□□□□□ -1.01
LDB2-216ENST00000515064 SOX12O15370 315 aa8.77□□□□□ -1.01
LDB2-216ENST00000515064 FKBP5Q13451 457 aaPredicted RBP8.77□□□□□ -1.01
LDB2-216ENST00000515064 CARD11Q9BXL7 1154 aa8.77□□□□□ -1.01
LDB2-216ENST00000515064 PPP6R1Q9UPN7 881 aa8.77□□□□□ -1.01
LDB2-216ENST00000515064 NKTRP30414 1462 aaKnown RBP8.77□□□□□ -1.01
LDB2-216ENST00000515064 ANKRD30AQ9BXX3 1397 aa8.77□□□□□ -1.01
LDB2-216ENST00000515064 EHBP1L1Q8N3D4 1523 aa8.77□□□□□ -1.01
LDB2-216ENST00000515064 MYCNP04198 464 aaPredicted RBP8.77□□□□□ -1.01
LDB2-216ENST00000515064 PSEN1P49768 467 aa8.77□□□□□ -1.01
LDB2-216ENST00000515064 SLFN5Q08AF3 891 aa8.77□□□□□ -1.01
LDB2-216ENST00000515064 TERF2Q15554 542 aa8.77□□□□□ -1.01
LDB2-216ENST00000515064 LRSAM1Q6UWE0 723 aa8.77□□□□□ -1.01
LDB2-216ENST00000515064 SPATA31D1Q6ZQQ2 1576 aa8.77□□□□□ -1.01
LDB2-216ENST00000515064 CHMP4CQ96CF2 233 aa8.77□□□□□ -1.01
LDB2-216ENST00000515064 RWDD1Q9H446 243 aaPredicted RBP8.77□□□□□ -1.01
LDB2-216ENST00000515064 SLC52A1Q9NWF4 448 aa8.77□□□□□ -1.01
LDB2-216ENST00000515064 CAMSAP2Q08AD1 1489 aa8.76□□□□□ -1.01
LDB2-216ENST00000515064 TCOF1Q13428 1488 aaKnown RBP8.76□□□□□ -1.01
LDB2-216ENST00000515064 SOCS7O14512 581 aa8.76□□□□□ -1.01
LDB2-216ENST00000515064 CC2D1BQ5T0F9 858 aaKnown RBP8.76□□□□□ -1.01
LDB2-216ENST00000515064 ADAMTS8Q9UP79 889 aa8.76□□□□□ -1.01
LDB2-216ENST00000515064 ARHGAP31Q2M1Z3 1444 aa8.76□□□□□ -1.01
LDB2-216ENST00000515064 DNMT1P26358 1616 aaKnown RBP8.76□□□□□ -1.01
LDB2-216ENST00000515064 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.75□□□□□ -1.01
LDB2-216ENST00000515064 K7ELQ4 463 aaPredicted RBP8.75□□□□□ -1.01
LDB2-216ENST00000515064 PANK1Q8TE04 598 aa8.75□□□□□ -1.01
LDB2-216ENST00000515064 ZNF142P52746 1687 aaPredicted RBP8.75□□□□□ -1.01
LDB2-216ENST00000515064 RIOK3O14730 519 aaKnown RBP8.75□□□□□ -1.01
LDB2-216ENST00000515064 RNF214Q8ND24 703 aa8.75□□□□□ -1.01
LDB2-216ENST00000515064 SLC4A1APQ9BWU0 796 aaKnown RBP8.75□□□□□ -1.01
LDB2-216ENST00000515064 KCNG1Q9UIX4 513 aa8.75□□□□□ -1.01
LDB2-216ENST00000515064 ZNF521Q96K83 1311 aa8.75□□□□□ -1.01
LDB2-216ENST00000515064 ST20-MTHFSA0A0A6YYL1 179 aa8.74□□□□□ -1.01
LDB2-216ENST00000515064 HSPA1LP34931 641 aa8.74□□□□□ -1.01
LDB2-216ENST00000515064 KRT222Q8N1A0 295 aa8.74□□□□□ -1.01
LDB2-216ENST00000515064 TRERF1Q96PN7 1200 aa8.74□□□□□ -1.01
LDB2-216ENST00000515064 SPTLC3Q9NUV7 552 aa8.74□□□□□ -1.01
LDB2-216ENST00000515064 FEZ2Q9UHY8 353 aaPredicted RBP8.74□□□□□ -1.01
LDB2-216ENST00000515064 DDX41Q9UJV9 622 aaKnown RBP8.74□□□□□ -1.01
LDB2-216ENST00000515064 TNRQ92752 1358 aa8.74□□□□□ -1.01
LDB2-216ENST00000515064 CCDC141Q6ZP82 1450 aa8.74□□□□□ -1.01
LDB2-216ENST00000515064 SYCE3A1L190 88 aa8.74□□□□□ -1.01
LDB2-216ENST00000515064 CTIFO43310 598 aaKnown RBP8.74□□□□□ -1.01
LDB2-216ENST00000515064 FAM193AP78312 1265 aa8.74□□□□□ -1.01
LDB2-216ENST00000515064 PKD2Q13563 968 aa8.74□□□□□ -1.01
LDB2-216ENST00000515064 CREBRFQ8IUR6 639 aa8.74□□□□□ -1.01
LDB2-216ENST00000515064 LMBRD1Q9NUN5 540 aa8.74□□□□□ -1.01
LDB2-216ENST00000515064 RBM27Q9P2N5 1060 aaKnown RBP8.74□□□□□ -1.01
LDB2-216ENST00000515064 CTNNA3Q9UI47 895 aa8.74□□□□□ -1.01
LDB2-216ENST00000515064 PLA2R1Q13018 1463 aa8.73□□□□□ -1.01
LDB2-216ENST00000515064 GTF2A1P52655 376 aaPredicted RBP8.73□□□□□ -1.01
LDB2-216ENST00000515064 A2ML1A8K2U0 1454 aa8.73□□□□□ -1.01
LDB2-216ENST00000515064 NEURL4Q96JN8 1562 aa8.73□□□□□ -1.01
LDB2-216ENST00000515064 LOC102724159A0A0B4J2E5 919 aa8.73□□□□□ -1.01
LDB2-216ENST00000515064 NUCB2P80303 420 aa8.73□□□□□ -1.01
LDB2-216ENST00000515064 PWP2Q15269 919 aaKnown RBP8.73□□□□□ -1.01
LDB2-216ENST00000515064 C17orf53Q8N3J3 647 aaPredicted RBP8.73□□□□□ -1.01
LDB2-216ENST00000515064 MORC2Q9Y6X9 1032 aaPredicted RBP8.73□□□□□ -1.01
LDB2-216ENST00000515064 RALGAPBQ86X10 1494 aa8.72□□□□□ -1.01
LDB2-216ENST00000515064 E9PCH4 1651 aa8.72□□□□□ -1.01
LDB2-216ENST00000515064 TSPY26PQ9H489 355 aa8.72□□□□□ -1.01
LDB2-216ENST00000515064 PCDHB15Q9Y5E8 787 aa8.72□□□□□ -1.01
LDB2-216ENST00000515064 NPC1L1Q9UHC9 1359 aa8.72□□□□□ -1.01
LDB2-216ENST00000515064 PATL2C9JE40 543 aaKnown RBP8.71□□□□□ -1.01
LDB2-216ENST00000515064 PRPF40AO75400 957 aaKnown RBP8.71□□□□□ -1.01
LDB2-216ENST00000515064 NCBP1Q09161 790 aaKnown RBP8.71□□□□□ -1.01
LDB2-216ENST00000515064 SYCP1Q15431 976 aa8.71□□□□□ -1.01
LDB2-216ENST00000515064 CTR9Q6PD62 1173 aa8.71□□□□□ -1.01
LDB2-216ENST00000515064 TRMT2AQ8IZ69 625 aaKnown RBP8.71□□□□□ -1.01
LDB2-216ENST00000515064 RSPH14Q9UHP6 348 aa8.71□□□□□ -1.01
LDB2-216ENST00000515064 KDM5DQ9BY66 1539 aa8.71□□□□□ -1.02
LDB2-216ENST00000515064 KIF16BQ96L93 1317 aa8.71□□□□□ -1.02
LDB2-216ENST00000515064 TSPY4P0CV99 314 aa8.71□□□□□ -1.02
LDB2-216ENST00000515064 TSPY10P0CW01 314 aa8.71□□□□□ -1.02
LDB2-216ENST00000515064 LMOD3Q0VAK6 560 aa8.71□□□□□ -1.02
LDB2-216ENST00000515064 MPNDQ8N594 471 aa8.71□□□□□ -1.02
LDB2-216ENST00000515064 GAS2L2Q8NHY3 880 aa8.71□□□□□ -1.02
LDB2-216ENST00000515064 MYCBPQ99417 103 aaPredicted RBP8.71□□□□□ -1.02
LDB2-216ENST00000515064 RASSF4Q9H2L5 321 aa8.71□□□□□ -1.02
LDB2-216ENST00000515064 TTC12Q9H892 705 aaPredicted RBP8.71□□□□□ -1.02
LDB2-216ENST00000515064 PZPP20742 1482 aa8.71□□□□□ -1.02
LDB2-216ENST00000515064 RAD51AP2Q09MP3 1159 aa8.7□□□□□ -1.02
LDB2-216ENST00000515064 KIF18AQ8NI77 898 aa8.7□□□□□ -1.02
LDB2-216ENST00000515064 GPT2Q8TD30 523 aa8.7□□□□□ -1.02
LDB2-216ENST00000515064 PER1O15534 1290 aaPredicted RBP8.7□□□□□ -1.02
LDB2-216ENST00000515064 MBD3O95983 291 aa8.7□□□□□ -1.02
LDB2-216ENST00000515064 ANKLE2Q86XL3 938 aa8.7□□□□□ -1.02
LDB2-216ENST00000515064 TMEM63CQ9P1W3 806 aa8.7□□□□□ -1.02
LDB2-216ENST00000515064 UGGT1Q9NYU2 1555 aa8.7□□□□□ -1.02
LDB2-216ENST00000515064 GOLGA6L6A8MZA4 724 aa8.69□□□□□ -1.02
LDB2-216ENST00000515064 HSP90B1P14625 803 aaKnown RBP8.69□□□□□ -1.02
LDB2-216ENST00000515064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.69□□□□□ -1.02
LDB2-216ENST00000515064 SHANK2Q9UPX8 1470 aa8.69□□□□□ -1.02
LDB2-216ENST00000515064 PHF14O94880 888 aa8.69□□□□□ -1.02
LDB2-216ENST00000515064 CD2BP2O95400 341 aaKnown RBP8.69□□□□□ -1.02
LDB2-216ENST00000515064 HOMEZQ8IX15 550 aa8.69□□□□□ -1.02
LDB2-216ENST00000515064 SYAP1Q96A49 352 aaPredicted RBP8.69□□□□□ -1.02
LDB2-216ENST00000515064 RBM33Q96EV2 1170 aaKnown RBP8.69□□□□□ -1.02
LDB2-216ENST00000515064 IQSEC2Q5JU85 1478 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms