RNA–Protein interactions for RNA: ENST00000514999.5

CPNE4-212, Transcript of copine 4, humanhuman

TSL 4

Gene CPNE4, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-212ENST00000514999 PACS2Q86VP3 889 aa8.76□□□□□ -1.01
CPNE4-212ENST00000514999 ISY1Q9ULR0 285 aaKnown RBP8.76□□□□□ -1.01
CPNE4-212ENST00000514999 DIP2CQ9Y2E4 1556 aa8.76□□□□□ -1.01
CPNE4-212ENST00000514999 CCDC144AA2RUR9 1427 aa8.75□□□□□ -1.01
CPNE4-212ENST00000514999 HSPA1LP34931 641 aa8.75□□□□□ -1.01
CPNE4-212ENST00000514999 LAPTM4AQ15012 233 aa8.75□□□□□ -1.01
CPNE4-212ENST00000514999 PDIA6Q15084 440 aa8.75□□□□□ -1.01
CPNE4-212ENST00000514999 NLRP13Q86W25 1043 aa8.75□□□□□ -1.01
CPNE4-212ENST00000514999 ABCA6Q8N139 1617 aa8.75□□□□□ -1.01
CPNE4-212ENST00000514999 MBD5Q9P267 1494 aa8.75□□□□□ -1.01
CPNE4-212ENST00000514999 MAP3K7O43318 606 aa8.74□□□□□ -1.01
CPNE4-212ENST00000514999 PPP4CP60510 307 aa8.74□□□□□ -1.01
CPNE4-212ENST00000514999 TJAP1Q5JTD0 557 aa8.74□□□□□ -1.01
CPNE4-212ENST00000514999 RALGAPBQ86X10 1494 aa8.73□□□□□ -1.01
CPNE4-212ENST00000514999 LCE2BO14633 110 aa8.73□□□□□ -1.01
CPNE4-212ENST00000514999 CLCN1P35523 988 aa8.73□□□□□ -1.01
CPNE4-212ENST00000514999 NAP1L5Q96NT1 182 aaPredicted RBP8.73□□□□□ -1.01
CPNE4-212ENST00000514999 ZNF777Q9ULD5 760 aaPredicted RBP8.73□□□□□ -1.01
CPNE4-212ENST00000514999 KDM5CP41229 1560 aa8.73□□□□□ -1.01
CPNE4-212ENST00000514999 AGLP35573 1532 aa8.72□□□□□ -1.01
CPNE4-212ENST00000514999 TOM1O60784 492 aa8.72□□□□□ -1.01
CPNE4-212ENST00000514999 TPM2P07951 284 aa8.72□□□□□ -1.01
CPNE4-212ENST00000514999 NBPF8Q3BBV2 869 aa8.72□□□□□ -1.01
CPNE4-212ENST00000514999 CDCA7LQ96GN5 454 aa8.72□□□□□ -1.01
CPNE4-212ENST00000514999 RRP7BPQ9NSQ0 103 aa8.72□□□□□ -1.01
CPNE4-212ENST00000514999 FAM198AQ9UFP1 575 aa8.72□□□□□ -1.01
CPNE4-212ENST00000514999 MED1Q15648 1581 aaPredicted RBP8.72□□□□□ -1.01
CPNE4-212ENST00000514999 REREQ9P2R6 1566 aa8.72□□□□□ -1.01
CPNE4-212ENST00000514999 ZMYM3Q14202 1370 aa8.72□□□□□ -1.01
CPNE4-212ENST00000514999 MLH3Q9UHC1 1453 aa8.71□□□□□ -1.01
CPNE4-212ENST00000514999 GOLGA6L3A6NEY3 463 aa8.71□□□□□ -1.02
CPNE4-212ENST00000514999 VSIG10Q8N0Z9 540 aa8.71□□□□□ -1.02
CPNE4-212ENST00000514999 UPF2Q9HAU5 1272 aaKnown RBP8.71□□□□□ -1.02
CPNE4-212ENST00000514999 KDM2BQ8NHM5 1336 aa8.71□□□□□ -1.02
CPNE4-212ENST00000514999 MAPK8IP3Q9UPT6 1336 aa8.71□□□□□ -1.02
CPNE4-212ENST00000514999 CDC42BPBQ9Y5S2 1711 aa8.71□□□□□ -1.02
CPNE4-212ENST00000514999 BLMP54132 1417 aaPredicted RBP8.71□□□□□ -1.02
CPNE4-212ENST00000514999 TROQ12816 1431 aaPredicted RBP8.71□□□□□ -1.02
CPNE4-212ENST00000514999 SPDYE16A6NNV3 312 aaPredicted RBP8.7□□□□□ -1.02
CPNE4-212ENST00000514999 SMAPO00193 183 aa8.7□□□□□ -1.02
CPNE4-212ENST00000514999 FRAT2O75474 233 aaPredicted RBP8.7□□□□□ -1.02
CPNE4-212ENST00000514999 PTMSP20962 102 aa8.7□□□□□ -1.02
CPNE4-212ENST00000514999 PRSS12P56730 875 aa8.7□□□□□ -1.02
CPNE4-212ENST00000514999 GGT6Q6P531 493 aa8.7□□□□□ -1.02
CPNE4-212ENST00000514999 SAMD7Q7Z3H4 446 aa8.7□□□□□ -1.02
CPNE4-212ENST00000514999 CENPJQ9HC77 1338 aaPredicted RBP8.7□□□□□ -1.02
CPNE4-212ENST00000514999 NINLQ9Y2I6 1382 aa8.7□□□□□ -1.02
CPNE4-212ENST00000514999 NPATQ14207 1427 aa8.7□□□□□ -1.02
CPNE4-212ENST00000514999 C3orf80F5H4A9 247 aa8.69□□□□□ -1.02
CPNE4-212ENST00000514999 GFRA3O60609 400 aa8.69□□□□□ -1.02
CPNE4-212ENST00000514999 CRBNQ96SW2 442 aa8.69□□□□□ -1.02
CPNE4-212ENST00000514999 ZMYND15Q9H091 742 aa8.69□□□□□ -1.02
CPNE4-212ENST00000514999 KIAA1107Q9UPP5 1409 aa8.69□□□□□ -1.02
CPNE4-212ENST00000514999 MROH2AA6NES4 1674 aa8.69□□□□□ -1.02
CPNE4-212ENST00000514999 CLTCQ00610 1675 aaKnown RBP8.69□□□□□ -1.02
CPNE4-212ENST00000514999 ITSN2Q9NZM3 1697 aa8.69□□□□□ -1.02
CPNE4-212ENST00000514999 KIDINS220Q9ULH0 1771 aa8.68□□□□□ -1.02
CPNE4-212ENST00000514999 PRIM1P49642 420 aaKnown RBP8.68□□□□□ -1.02
CPNE4-212ENST00000514999 AAMPQ13685 434 aa8.68□□□□□ -1.02
CPNE4-212ENST00000514999 TRAF7Q6Q0C0 670 aa8.68□□□□□ -1.02
CPNE4-212ENST00000514999 MAP7D2Q96T17 732 aa8.68□□□□□ -1.02
CPNE4-212ENST00000514999 MTRQ99707 1265 aa8.68□□□□□ -1.02
CPNE4-212ENST00000514999 SPAG9O60271 1321 aaKnown RBP8.68□□□□□ -1.02
CPNE4-212ENST00000514999 PARD3Q8TEW0 1356 aa8.68□□□□□ -1.02
CPNE4-212ENST00000514999 DAPK1P53355 1430 aa8.68□□□□□ -1.02
CPNE4-212ENST00000514999 MYO3AQ8NEV4 1616 aa8.68□□□□□ -1.02
CPNE4-212ENST00000514999 DNMT1P26358 1616 aaKnown RBP8.67□□□□□ -1.02
CPNE4-212ENST00000514999 ABCC1P33527 1531 aa8.67□□□□□ -1.02
CPNE4-212ENST00000514999 MRE11P49959 708 aa8.67□□□□□ -1.02
CPNE4-212ENST00000514999 C8orf34Q49A92 452 aa8.67□□□□□ -1.02
CPNE4-212ENST00000514999 PRKD2Q9BZL6 878 aa8.67□□□□□ -1.02
CPNE4-212ENST00000514999 PREX2Q70Z35 1606 aa8.66□□□□□ -1.02
CPNE4-212ENST00000514999 CEP170BQ9Y4F5 1589 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-212ENST00000514999 PLA2R1Q13018 1463 aa8.66□□□□□ -1.02
CPNE4-212ENST00000514999 ANKRD30AQ9BXX3 1397 aa8.66□□□□□ -1.02
CPNE4-212ENST00000514999 HNRNPMP52272 730 aaKnown RBP eCLIP8.66□□□□□ -1.02
CPNE4-212ENST00000514999 PPP1R18Q6NYC8 613 aa8.66□□□□□ -1.02
CPNE4-212ENST00000514999 DCAF11Q8TEB1 546 aa8.66□□□□□ -1.02
CPNE4-212ENST00000514999 TATDN2Q93075 761 aa8.66□□□□□ -1.02
CPNE4-212ENST00000514999 POLR3GLQ9BT43 218 aa8.66□□□□□ -1.02
CPNE4-212ENST00000514999 IL21Q9HBE4 155 aa8.66□□□□□ -1.02
CPNE4-212ENST00000514999 RRAGDQ9NQL2 400 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-212ENST00000514999 E9PCH4 1651 aa8.65□□□□□ -1.02
CPNE4-212ENST00000514999 NGEFQ8N5V2 710 aa8.65□□□□□ -1.02
CPNE4-212ENST00000514999 BBXQ8WY36 941 aaPredicted RBP8.65□□□□□ -1.02
CPNE4-212ENST00000514999 PDCL3Q9H2J4 239 aa8.65□□□□□ -1.02
CPNE4-212ENST00000514999 CHIC2Q9UKJ5 165 aa8.65□□□□□ -1.02
CPNE4-212ENST00000514999 PNMA3Q9UL41 463 aa8.65□□□□□ -1.02
CPNE4-212ENST00000514999 ARIH1Q9Y4X5 557 aaPredicted RBP8.65□□□□□ -1.02
CPNE4-212ENST00000514999 ZNF142P52746 1687 aaPredicted RBP8.65□□□□□ -1.03
CPNE4-212ENST00000514999 LRRIQ1Q96JM4 1722 aa8.64□□□□□ -1.03
CPNE4-212ENST00000514999 FSD2A1L4K1 749 aa8.64□□□□□ -1.03
CPNE4-212ENST00000514999 DDX11L8A8MPP1 907 aa8.64□□□□□ -1.03
CPNE4-212ENST00000514999 NBPF26B4DH59 902 aa8.64□□□□□ -1.03
CPNE4-212ENST00000514999 NRG2O14511 850 aaPredicted RBP8.64□□□□□ -1.03
CPNE4-212ENST00000514999 TRIM44Q96DX7 344 aaPredicted RBP8.64□□□□□ -1.03
CPNE4-212ENST00000514999 CARD11Q9BXL7 1154 aa8.64□□□□□ -1.03
CPNE4-212ENST00000514999 V9GY48 417 aaPredicted RBP8.64□□□□□ -1.03
CPNE4-212ENST00000514999 SLC4A3P48751 1232 aa8.63□□□□□ -1.03
CPNE4-212ENST00000514999 TERF1P54274 439 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms