RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 RIMBP3CA6NJZ7 1639 aa16.96■□□□□ 0.31
TSPAN17-208ENST00000514705 RIMBP3BA6NNM3 1639 aa16.96■□□□□ 0.31
TSPAN17-208ENST00000514705 RIMBP3Q9UFD9 1639 aa16.96■□□□□ 0.31
TSPAN17-208ENST00000514705 ALDH1L2Q3SY69 923 aa16.96■□□□□ 0.31
TSPAN17-208ENST00000514705 CDC42BPAQ5VT25 1732 aa16.96■□□□□ 0.31
TSPAN17-208ENST00000514705 TNRQ92752 1358 aa16.96■□□□□ 0.3
TSPAN17-208ENST00000514705 C16orf71Q8IYS4 520 aaPredicted RBP16.95■□□□□ 0.3
TSPAN17-208ENST00000514705 TSPYL6Q8N831 410 aa16.94■□□□□ 0.3
TSPAN17-208ENST00000514705 NFE2L2Q16236 605 aa16.94■□□□□ 0.3
TSPAN17-208ENST00000514705 KLHL40Q2TBA0 621 aa16.94■□□□□ 0.3
TSPAN17-208ENST00000514705 TRIM35Q9UPQ4 493 aa16.94■□□□□ 0.3
TSPAN17-208ENST00000514705 RBM25P49756 843 aaKnown RBP16.94■□□□□ 0.3
TSPAN17-208ENST00000514705 TSPOAP1O95153 1857 aa16.93■□□□□ 0.3
TSPAN17-208ENST00000514705 FYB1O15117 783 aa16.93■□□□□ 0.3
TSPAN17-208ENST00000514705 CHAF1AQ13111 956 aaPredicted RBP16.93■□□□□ 0.3
TSPAN17-208ENST00000514705 RRS1Q15050 365 aaKnown RBP16.93■□□□□ 0.3
TSPAN17-208ENST00000514705 DRC7Q8IY82 874 aa16.93■□□□□ 0.3
TSPAN17-208ENST00000514705 UQCRHLA0A096LP55 91 aa16.92■□□□□ 0.3
TSPAN17-208ENST00000514705 GOLGA6L4A6NEF3 574 aa16.92■□□□□ 0.3
TSPAN17-208ENST00000514705 UQCRHP07919 91 aa16.92■□□□□ 0.3
TSPAN17-208ENST00000514705 EMILIN1Q9Y6C2 1016 aa16.92■□□□□ 0.3
TSPAN17-208ENST00000514705 ZMYM3Q14202 1370 aa16.92■□□□□ 0.3
TSPAN17-208ENST00000514705 MLH3Q9UHC1 1453 aa16.92■□□□□ 0.3
TSPAN17-208ENST00000514705 FAM83GA6ND36 823 aa16.92■□□□□ 0.3
TSPAN17-208ENST00000514705 CHMP3Q9Y3E7 222 aa16.92■□□□□ 0.3
TSPAN17-208ENST00000514705 ZFYVE16Q7Z3T8 1539 aa16.91■□□□□ 0.3
TSPAN17-208ENST00000514705 ARAP3Q8WWN8 1544 aa16.91■□□□□ 0.3
TSPAN17-208ENST00000514705 PHF14O94880 888 aa16.91■□□□□ 0.3
TSPAN17-208ENST00000514705 CSPP1Q1MSJ5 1256 aa16.91■□□□□ 0.3
TSPAN17-208ENST00000514705 ABCC11Q96J66 1382 aa16.91■□□□□ 0.3
TSPAN17-208ENST00000514705 CD2BP2O95400 341 aaKnown RBP16.91■□□□□ 0.3
TSPAN17-208ENST00000514705 CWC22Q9HCG8 908 aaKnown RBP16.91■□□□□ 0.3
TSPAN17-208ENST00000514705 ERC2O15083 957 aa16.9■□□□□ 0.3
TSPAN17-208ENST00000514705 ZSCAN23Q3MJ62 389 aa16.9■□□□□ 0.3
TSPAN17-208ENST00000514705 CCDC39Q9UFE4 941 aa16.9■□□□□ 0.3
TSPAN17-208ENST00000514705 PTPRTO14522 1441 aa16.9■□□□□ 0.3
TSPAN17-208ENST00000514705 MAST1Q9Y2H9 1570 aa16.9■□□□□ 0.3
TSPAN17-208ENST00000514705 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
TSPAN17-208ENST00000514705 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
TSPAN17-208ENST00000514705 MBIPQ9NS73 344 aa16.89■□□□□ 0.29
TSPAN17-208ENST00000514705 ERVK-7P63135 1459 aa16.89■□□□□ 0.29
TSPAN17-208ENST00000514705 FKBP5Q13451 457 aaPredicted RBP16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 ZGPATQ8N5A5 531 aaKnown RBP16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 PHACTR3Q96KR7 559 aa16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 MBD3O95983 291 aa16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 SULT6B1Q6IMI4 303 aa16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 IL16Q14005 1332 aa16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 PRIM1P49642 420 aaKnown RBP16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 PROSER2Q86WR7 435 aaPredicted RBP16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 UPF3BQ9BZI7 483 aaKnown RBP16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 GDPD2Q9HCC8 539 aa16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 MIS18AQ9NYP9 233 aa16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 EXOC6BQ9Y2D4 811 aa16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 ZBTB7BO15156 539 aaPredicted RBP16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 TSHZ3Q63HK5 1081 aa16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 ANKRD36BQ8N2N9 1353 aa16.88■□□□□ 0.29
TSPAN17-208ENST00000514705 WAPLQ7Z5K2 1190 aa16.87■□□□□ 0.29
TSPAN17-208ENST00000514705 TSPY26PQ9H489 355 aa16.87■□□□□ 0.29
TSPAN17-208ENST00000514705 VAMP4O75379 141 aa16.87■□□□□ 0.29
TSPAN17-208ENST00000514705 C8orf58Q8NAV2 365 aa16.87■□□□□ 0.29
TSPAN17-208ENST00000514705 PDCL3Q9H2J4 239 aa16.87■□□□□ 0.29
TSPAN17-208ENST00000514705 CROCC2H7BZ55 1655 aa16.86■□□□□ 0.29
TSPAN17-208ENST00000514705 ATAD2Q6PL18 1390 aa16.86■□□□□ 0.29
TSPAN17-208ENST00000514705 MRPL50Q8N5N7 158 aaKnown RBP16.86■□□□□ 0.29
TSPAN17-208ENST00000514705 TSPYL4Q9UJ04 414 aa16.86■□□□□ 0.29
TSPAN17-208ENST00000514705 SYNMO15061 1565 aa16.86■□□□□ 0.29
TSPAN17-208ENST00000514705 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
TSPAN17-208ENST00000514705 LTV1Q96GA3 475 aaPredicted RBP16.86■□□□□ 0.29
TSPAN17-208ENST00000514705 ERBB4Q15303 1308 aa16.86■□□□□ 0.29
TSPAN17-208ENST00000514705 ABCA9Q8IUA7 1624 aa16.85■□□□□ 0.29
TSPAN17-208ENST00000514705 TTC22Q5TAA0 569 aa16.85■□□□□ 0.29
TSPAN17-208ENST00000514705 MCM10Q7L590 875 aa16.85■□□□□ 0.29
TSPAN17-208ENST00000514705 OTUD7AQ8TE49 926 aaPredicted RBP16.85■□□□□ 0.29
TSPAN17-208ENST00000514705 SDSP20132 328 aa16.85■□□□□ 0.29
TSPAN17-208ENST00000514705 IFT57Q9NWB7 429 aa16.85■□□□□ 0.29
TSPAN17-208ENST00000514705 TAOK2Q9UL54 1235 aa16.85■□□□□ 0.29
TSPAN17-208ENST00000514705 A0A0G2JS52 829 aa16.84■□□□□ 0.29
TSPAN17-208ENST00000514705 ATF3P18847 181 aa16.84■□□□□ 0.29
TSPAN17-208ENST00000514705 NME9Q86XW9 330 aa16.84■□□□□ 0.29
TSPAN17-208ENST00000514705 CHAMP1Q96JM3 812 aa16.84■□□□□ 0.29
TSPAN17-208ENST00000514705 BCL11BQ9C0K0 894 aaPredicted RBP16.84■□□□□ 0.29
TSPAN17-208ENST00000514705 NSD2O96028 1365 aa16.84■□□□□ 0.29
TSPAN17-208ENST00000514705 F6X3S4 739 aa16.84■□□□□ 0.29
TSPAN17-208ENST00000514705 RPAP2Q8IXW5 612 aaPredicted RBP16.84■□□□□ 0.29
TSPAN17-208ENST00000514705 KRT24Q2M2I5 525 aa16.83■□□□□ 0.29
TSPAN17-208ENST00000514705 PLEKHM2Q8IWE5 1019 aa16.83■□□□□ 0.29
TSPAN17-208ENST00000514705 CDC42BPBQ9Y5S2 1711 aa16.83■□□□□ 0.28
TSPAN17-208ENST00000514705 FIBPO43427 364 aa16.83■□□□□ 0.28
TSPAN17-208ENST00000514705 MAP4K4O95819 1239 aaPredicted RBP16.83■□□□□ 0.28
TSPAN17-208ENST00000514705 PSME1Q06323 249 aa16.83■□□□□ 0.28
TSPAN17-208ENST00000514705 RBSNQ9H1K0 784 aa16.83■□□□□ 0.28
TSPAN17-208ENST00000514705 A0A1W2PP64 1363 aa16.83■□□□□ 0.28
TSPAN17-208ENST00000514705 FGD1P98174 961 aa16.82■□□□□ 0.28
TSPAN17-208ENST00000514705 PKP1Q13835 747 aa16.82■□□□□ 0.28
TSPAN17-208ENST00000514705 AMPHP49418 695 aa16.82■□□□□ 0.28
TSPAN17-208ENST00000514705 MAP7D2Q96T17 732 aa16.82■□□□□ 0.28
TSPAN17-208ENST00000514705 NAP1L2Q9ULW6 460 aaPredicted RBP16.82■□□□□ 0.28
TSPAN17-208ENST00000514705 VPS37CA5D8V6 355 aaPredicted RBP16.82■□□□□ 0.28
TSPAN17-208ENST00000514705 HECW2Q9P2P5 1572 aa16.81■□□□□ 0.28
TSPAN17-208ENST00000514705 UGGT1Q9NYU2 1555 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms