RNA–Protein interactions for RNA: ENST00000513349.5

DROSHA-220, Transcript of drosha ribonuclease III, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DROSHA, Length 4,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHA-220ENST00000513349 C9orf78Q9NZ63 289 aaPredicted RBP10.85□□□□□ -0.67
DROSHA-220ENST00000513349 KIF21AQ7Z4S6 1674 aa10.85□□□□□ -0.67
DROSHA-220ENST00000513349 SPC24Q8NBT2 197 aa10.85□□□□□ -0.67
DROSHA-220ENST00000513349 SHANK2Q9UPX8 1470 aa10.85□□□□□ -0.67
DROSHA-220ENST00000513349 TPM1P09493 284 aa10.85□□□□□ -0.67
DROSHA-220ENST00000513349 NOM1Q5C9Z4 860 aaKnown RBP10.85□□□□□ -0.67
DROSHA-220ENST00000513349 CCDC30Q5VVM6 783 aa10.85□□□□□ -0.67
DROSHA-220ENST00000513349 CPLX2Q6PUV4 134 aaKnown RBP10.85□□□□□ -0.67
DROSHA-220ENST00000513349 NGDNQ8NEJ9 315 aaKnown RBP10.85□□□□□ -0.67
DROSHA-220ENST00000513349 ARHGAP45Q92619 1136 aa10.85□□□□□ -0.67
DROSHA-220ENST00000513349 CLASRPQ8N2M8 674 aaKnown RBP10.84□□□□□ -0.67
DROSHA-220ENST00000513349 ANKRD1Q15327 319 aa10.84□□□□□ -0.67
DROSHA-220ENST00000513349 TNMDQ9H2S6 317 aa10.84□□□□□ -0.67
DROSHA-220ENST00000513349 CYP46A1Q9Y6A2 500 aa10.84□□□□□ -0.67
DROSHA-220ENST00000513349 A0A0U1RQG5 324 aaPredicted RBP10.84□□□□□ -0.67
DROSHA-220ENST00000513349 PLEKHG5O94827 1062 aa10.84□□□□□ -0.67
DROSHA-220ENST00000513349 RBM25P49756 843 aaKnown RBP10.84□□□□□ -0.67
DROSHA-220ENST00000513349 G3BP1Q13283 466 aaKnown RBP eCLIP10.84□□□□□ -0.67
DROSHA-220ENST00000513349 ACBD3Q9H3P7 528 aa10.84□□□□□ -0.67
DROSHA-220ENST00000513349 HOOK1Q9UJC3 728 aaKnown RBP10.84□□□□□ -0.67
DROSHA-220ENST00000513349 KIF2AO00139 706 aaPredicted RBP10.83□□□□□ -0.68
DROSHA-220ENST00000513349 KINO60870 393 aaKnown RBP10.83□□□□□ -0.68
DROSHA-220ENST00000513349 GORABQ5T7V8 394 aa10.83□□□□□ -0.68
DROSHA-220ENST00000513349 ADGRL2O95490 1459 aa10.83□□□□□ -0.68
DROSHA-220ENST00000513349 SURF6O75683 361 aaKnown RBP10.83□□□□□ -0.68
DROSHA-220ENST00000513349 CCAR2Q8N163 923 aaKnown RBP10.83□□□□□ -0.68
DROSHA-220ENST00000513349 NUP62CLQ9H1M0 184 aa10.83□□□□□ -0.68
DROSHA-220ENST00000513349 RAPGEF6Q8TEU7 1601 aa10.83□□□□□ -0.68
DROSHA-220ENST00000513349 URB2Q14146 1524 aaKnown RBP10.83□□□□□ -0.68
DROSHA-220ENST00000513349 FAM135AQ9P2D6 1515 aa10.83□□□□□ -0.68
DROSHA-220ENST00000513349 LMOD2Q6P5Q4 547 aa10.82□□□□□ -0.68
DROSHA-220ENST00000513349 WDR62O43379 1518 aa10.82□□□□□ -0.68
DROSHA-220ENST00000513349 SLC4A2P04920 1241 aa10.82□□□□□ -0.68
DROSHA-220ENST00000513349 TEFQ10587 303 aa10.82□□□□□ -0.68
DROSHA-220ENST00000513349 SETQ01105 290 aaPredicted RBP10.82□□□□□ -0.68
DROSHA-220ENST00000513349 MAP3K11Q16584 847 aa10.82□□□□□ -0.68
DROSHA-220ENST00000513349 GAS2L2Q8NHY3 880 aa10.82□□□□□ -0.68
DROSHA-220ENST00000513349 SDF4Q9BRK5 362 aa10.82□□□□□ -0.68
DROSHA-220ENST00000513349 NUP153P49790 1475 aaKnown RBP10.82□□□□□ -0.68
DROSHA-220ENST00000513349 GRIN2AQ12879 1464 aa10.82□□□□□ -0.68
DROSHA-220ENST00000513349 NEXNQ0ZGT2 675 aa10.81□□□□□ -0.68
DROSHA-220ENST00000513349 PPP6R1Q9UPN7 881 aa10.81□□□□□ -0.68
DROSHA-220ENST00000513349 DDX58O95786 925 aaKnown RBP10.81□□□□□ -0.68
DROSHA-220ENST00000513349 MLECQ14165 292 aa10.81□□□□□ -0.68
DROSHA-220ENST00000513349 NCBP3Q53F19 620 aaKnown RBP10.81□□□□□ -0.68
DROSHA-220ENST00000513349 TTC22Q5TAA0 569 aa10.81□□□□□ -0.68
DROSHA-220ENST00000513349 CCDC70Q6NSX1 233 aa10.81□□□□□ -0.68
DROSHA-220ENST00000513349 ERC1Q8IUD2 1116 aa10.81□□□□□ -0.68
DROSHA-220ENST00000513349 MPNDQ8N594 471 aa10.81□□□□□ -0.68
DROSHA-220ENST00000513349 CGNQ9P2M7 1197 aaKnown RBP10.81□□□□□ -0.68
DROSHA-220ENST00000513349 CBX1P83916 185 aa10.8□□□□□ -0.68
DROSHA-220ENST00000513349 LARP1BQ659C4 914 aaKnown RBP10.8□□□□□ -0.68
DROSHA-220ENST00000513349 USP25Q9UHP3 1055 aa10.8□□□□□ -0.68
DROSHA-220ENST00000513349 NOL7Q9UMY1 257 aaKnown RBP10.8□□□□□ -0.68
DROSHA-220ENST00000513349 RLBP1P12271 317 aa10.8□□□□□ -0.68
DROSHA-220ENST00000513349 ZNF396Q96N95 335 aaPredicted RBP10.8□□□□□ -0.68
DROSHA-220ENST00000513349 CPLX1O14810 134 aa10.8□□□□□ -0.68
DROSHA-220ENST00000513349 TSR1Q2NL82 804 aaKnown RBP10.8□□□□□ -0.68
DROSHA-220ENST00000513349 HSP90B2PQ58FF3 399 aa10.8□□□□□ -0.68
DROSHA-220ENST00000513349 EIF2S2P20042 333 aaKnown RBP10.79□□□□□ -0.68
DROSHA-220ENST00000513349 SYNE3Q6ZMZ3 975 aa10.79□□□□□ -0.68
DROSHA-220ENST00000513349 PRAM1Q96QH2 718 aa10.79□□□□□ -0.68
DROSHA-220ENST00000513349 SAMD9Q5K651 1589 aa10.79□□□□□ -0.68
DROSHA-220ENST00000513349 SMAP1Q8IYB5 467 aaPredicted RBP10.79□□□□□ -0.68
DROSHA-220ENST00000513349 FSD2A1L4K1 749 aa10.79□□□□□ -0.68
DROSHA-220ENST00000513349 NEMFO60524 1076 aa10.79□□□□□ -0.68
DROSHA-220ENST00000513349 SH2B1Q9NRF2 756 aaPredicted RBP10.79□□□□□ -0.68
DROSHA-220ENST00000513349 SLC52A1Q9NWF4 448 aa10.79□□□□□ -0.68
DROSHA-220ENST00000513349 ADCY5O95622 1261 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 MX1P20591 662 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 ZNF445P59923 1031 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 PRDM10Q9NQV6 1147 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 ANKRD36BQ8N2N9 1353 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 TSPYL1Q9H0U9 437 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 CFAP45Q9UL16 551 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 TRIM29Q14134 588 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 NECTIN2Q92692 538 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 SPATA32Q96LK8 384 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 CCDC94Q9BW85 323 aaPredicted RBP10.78□□□□□ -0.68
DROSHA-220ENST00000513349 GTPBP4Q9BZE4 634 aaKnown RBP10.78□□□□□ -0.68
DROSHA-220ENST00000513349 SCAND2PQ9GZW5 306 aaPredicted RBP10.78□□□□□ -0.68
DROSHA-220ENST00000513349 ZBTB40Q9NUA8 1239 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 PDRG1Q9NUG6 133 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 UBE2HP62256 183 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 NOLC1Q14978 699 aaKnown RBP eCLIP10.78□□□□□ -0.68
DROSHA-220ENST00000513349 AK7Q96M32 723 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 SPINK5Q9NQ38 1064 aaPredicted RBP10.78□□□□□ -0.68
DROSHA-220ENST00000513349 CABP1Q9NZU7 370 aa10.78□□□□□ -0.68
DROSHA-220ENST00000513349 RBM27Q9P2N5 1060 aaKnown RBP10.78□□□□□ -0.68
DROSHA-220ENST00000513349 ANAPC15P60006 121 aa10.77□□□□□ -0.68
DROSHA-220ENST00000513349 PPP4R3BQ5MIZ7 849 aa10.77□□□□□ -0.68
DROSHA-220ENST00000513349 ANKRD20A12PQ8NF67 263 aa10.77□□□□□ -0.68
DROSHA-220ENST00000513349 ERCC4Q92889 916 aaPredicted RBP10.77□□□□□ -0.68
DROSHA-220ENST00000513349 LTV1Q96GA3 475 aaPredicted RBP10.77□□□□□ -0.68
DROSHA-220ENST00000513349 CDK19Q9BWU1 502 aa10.77□□□□□ -0.68
DROSHA-220ENST00000513349 CAVIN2O95810 425 aa10.77□□□□□ -0.69
DROSHA-220ENST00000513349 PRIM1P49642 420 aaKnown RBP10.77□□□□□ -0.69
DROSHA-220ENST00000513349 OLFM4Q6UX06 510 aa10.77□□□□□ -0.69
DROSHA-220ENST00000513349 PUS7Q96PZ0 661 aaKnown RBP10.77□□□□□ -0.69
DROSHA-220ENST00000513349 FSD1Q9BTV5 496 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms