RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 CT47A1Q5JQC4 288 aaPredicted RBP14.83□□□□□ -0.03
COL11A1-210ENST00000512756 FYB1O15117 783 aa14.83□□□□□ -0.04
COL11A1-210ENST00000512756 CCDC184Q52MB2 194 aa14.83□□□□□ -0.04
COL11A1-210ENST00000512756 CAGE1Q8TC20 777 aa14.83□□□□□ -0.04
COL11A1-210ENST00000512756 RTEL1-TNFRSF6BF6WH68 1400 aa14.83□□□□□ -0.04
COL11A1-210ENST00000512756 NAIPQ13075 1403 aa14.83□□□□□ -0.04
COL11A1-210ENST00000512756 IFT140Q96RY7 1462 aa14.82□□□□□ -0.04
COL11A1-210ENST00000512756 ESCO1Q5FWF5 840 aa14.82□□□□□ -0.04
COL11A1-210ENST00000512756 CWC15Q9P013 229 aaKnown RBP14.82□□□□□ -0.04
COL11A1-210ENST00000512756 TTC39AQ5SRH9 613 aa14.82□□□□□ -0.04
COL11A1-210ENST00000512756 TNMDQ9H2S6 317 aa14.82□□□□□ -0.04
COL11A1-210ENST00000512756 FMNL2Q96PY5 1086 aa14.82□□□□□ -0.04
COL11A1-210ENST00000512756 LARP1BQ659C4 914 aaKnown RBP14.81□□□□□ -0.04
COL11A1-210ENST00000512756 MAGEC2Q9UBF1 373 aaPredicted RBP14.81□□□□□ -0.04
COL11A1-210ENST00000512756 DACH1Q9UI36 760 aa14.81□□□□□ -0.04
COL11A1-210ENST00000512756 NFE2L2Q16236 605 aa14.81□□□□□ -0.04
COL11A1-210ENST00000512756 TRIM22Q8IYM9 498 aa14.81□□□□□ -0.04
COL11A1-210ENST00000512756 GNL3LQ9NVN8 582 aaKnown RBP14.81□□□□□ -0.04
COL11A1-210ENST00000512756 MYO6Q9UM54 1294 aa14.81□□□□□ -0.04
COL11A1-210ENST00000512756 ATP2B1P20020 1258 aa14.8□□□□□ -0.04
COL11A1-210ENST00000512756 BLOC1S2Q6QNY1 142 aa14.8□□□□□ -0.04
COL11A1-210ENST00000512756 ZNF530Q6P9A1 599 aaPredicted RBP14.8□□□□□ -0.04
COL11A1-210ENST00000512756 KRT32Q14532 448 aa14.8□□□□□ -0.04
COL11A1-210ENST00000512756 NACAP1Q9BZK3 213 aa14.8□□□□□ -0.04
COL11A1-210ENST00000512756 CCDC66A2RUB6 948 aa14.8□□□□□ -0.04
COL11A1-210ENST00000512756 ZSCAN25Q6NSZ9 544 aa14.8□□□□□ -0.04
COL11A1-210ENST00000512756 TMPOP42166 694 aaKnown RBP14.79□□□□□ -0.04
COL11A1-210ENST00000512756 ODF2Q5BJF6 829 aa14.79□□□□□ -0.04
COL11A1-210ENST00000512756 THEMISQ8N1K5 641 aaPredicted RBP14.79□□□□□ -0.04
COL11A1-210ENST00000512756 CNNM1Q9NRU3 951 aa14.79□□□□□ -0.04
COL11A1-210ENST00000512756 PPP6R1Q9UPN7 881 aa14.79□□□□□ -0.04
COL11A1-210ENST00000512756 MRC2Q9UBG0 1479 aa14.79□□□□□ -0.04
COL11A1-210ENST00000512756 CFAP45Q9UL16 551 aa14.79□□□□□ -0.04
COL11A1-210ENST00000512756 TOPBP1Q92547 1522 aa14.79□□□□□ -0.04
COL11A1-210ENST00000512756 ME1P48163 572 aa14.79□□□□□ -0.04
COL11A1-210ENST00000512756 SRGAP3O43295 1099 aa14.78□□□□□ -0.04
COL11A1-210ENST00000512756 CDK5RAP3Q96JB5 506 aa14.78□□□□□ -0.04
COL11A1-210ENST00000512756 ANO8Q9HCE9 1232 aaPredicted RBP14.78□□□□□ -0.04
COL11A1-210ENST00000512756 SERPINC1P01008 464 aa14.78□□□□□ -0.04
COL11A1-210ENST00000512756 CEBPZQ03701 1054 aaKnown RBP14.78□□□□□ -0.04
COL11A1-210ENST00000512756 DCTN1Q14203 1278 aa14.78□□□□□ -0.04
COL11A1-210ENST00000512756 PDRG1Q9NUG6 133 aa14.78□□□□□ -0.04
COL11A1-210ENST00000512756 CTNNA3Q9UI47 895 aa14.78□□□□□ -0.04
COL11A1-210ENST00000512756 SPG7Q9UQ90 795 aa14.78□□□□□ -0.04
COL11A1-210ENST00000512756 PATL2C9JE40 543 aaKnown RBP14.78□□□□□ -0.04
COL11A1-210ENST00000512756 SPC24Q8NBT2 197 aa14.78□□□□□ -0.04
COL11A1-210ENST00000512756 ZNHIT6Q9NWK9 470 aaKnown RBP14.78□□□□□ -0.04
COL11A1-210ENST00000512756 ABCC11Q96J66 1382 aa14.78□□□□□ -0.04
COL11A1-210ENST00000512756 NSD3Q9BZ95 1437 aa14.77□□□□□ -0.04
COL11A1-210ENST00000512756 RRP12Q5JTH9 1297 aaKnown RBP14.77□□□□□ -0.04
COL11A1-210ENST00000512756 CBFA2T2O43439 604 aa14.77□□□□□ -0.05
COL11A1-210ENST00000512756 CDKL5O76039 1030 aa14.77□□□□□ -0.05
COL11A1-210ENST00000512756 TMEM57Q8N5G2 664 aa14.77□□□□□ -0.05
COL11A1-210ENST00000512756 POLA1P09884 1462 aaPredicted RBP14.77□□□□□ -0.05
COL11A1-210ENST00000512756 ALDH1L2Q3SY69 923 aa14.77□□□□□ -0.05
COL11A1-210ENST00000512756 RDXP35241 583 aaKnown RBP14.76□□□□□ -0.05
COL11A1-210ENST00000512756 CABP4P57796 275 aa14.76□□□□□ -0.05
COL11A1-210ENST00000512756 AACSQ86V21 672 aa14.76□□□□□ -0.05
COL11A1-210ENST00000512756 CCDC112Q8NEF3 446 aa14.76□□□□□ -0.05
COL11A1-210ENST00000512756 PROSER2Q86WR7 435 aaPredicted RBP14.76□□□□□ -0.05
COL11A1-210ENST00000512756 CCAR1Q8IX12 1150 aaKnown RBP14.76□□□□□ -0.05
COL11A1-210ENST00000512756 STK3Q13188 491 aa14.76□□□□□ -0.05
COL11A1-210ENST00000512756 SPATA32Q96LK8 384 aa14.76□□□□□ -0.05
COL11A1-210ENST00000512756 RBM42Q9BTD8 480 aaKnown RBP14.76□□□□□ -0.05
COL11A1-210ENST00000512756 CCDC141Q6ZP82 1450 aa14.76□□□□□ -0.05
COL11A1-210ENST00000512756 TTLL5Q6EMB2 1281 aa14.76□□□□□ -0.05
COL11A1-210ENST00000512756 PPFIBP1Q86W92 1011 aa14.76□□□□□ -0.05
COL11A1-210ENST00000512756 ESPNB1AK53 854 aa14.75□□□□□ -0.05
COL11A1-210ENST00000512756 STIM1Q13586 685 aa14.75□□□□□ -0.05
COL11A1-210ENST00000512756 SIL1Q9H173 461 aa14.75□□□□□ -0.05
COL11A1-210ENST00000512756 EPRSP07814 1512 aaKnown RBP14.75□□□□□ -0.05
COL11A1-210ENST00000512756 KDM4AO75164 1064 aa14.75□□□□□ -0.05
COL11A1-210ENST00000512756 CEP57L1Q8IYX8 460 aa14.75□□□□□ -0.05
COL11A1-210ENST00000512756 JAKMIP1Q96N16 626 aaKnown RBP14.75□□□□□ -0.05
COL11A1-210ENST00000512756 LUC7LQ9NQ29 371 aaKnown RBP14.75□□□□□ -0.05
COL11A1-210ENST00000512756 NUP62CLQ9H1M0 184 aa14.75□□□□□ -0.05
COL11A1-210ENST00000512756 TXLNBQ8N3L3 684 aa14.75□□□□□ -0.05
COL11A1-210ENST00000512756 CCDC57Q2TAC2 916 aa14.74□□□□□ -0.05
COL11A1-210ENST00000512756 IL27Q8NEV9 243 aa14.74□□□□□ -0.05
COL11A1-210ENST00000512756 MTMR7Q9Y216 660 aa14.74□□□□□ -0.05
COL11A1-210ENST00000512756 HMGXB3Q12766 1538 aa14.74□□□□□ -0.05
COL11A1-210ENST00000512756 CCDC69A6NI79 296 aa14.74□□□□□ -0.05
COL11A1-210ENST00000512756 HSP90AB2PQ58FF8 381 aa14.74□□□□□ -0.05
COL11A1-210ENST00000512756 BRPF1P55201 1214 aaPredicted RBP14.74□□□□□ -0.05
COL11A1-210ENST00000512756 IKQ13123 557 aaPredicted RBP14.74□□□□□ -0.05
COL11A1-210ENST00000512756 MEX3CQ5U5Q3 659 aaKnown RBP14.74□□□□□ -0.05
COL11A1-210ENST00000512756 NOL7Q9UMY1 257 aaKnown RBP14.74□□□□□ -0.05
COL11A1-210ENST00000512756 RARSP54136 660 aaKnown RBP14.73□□□□□ -0.05
COL11A1-210ENST00000512756 CEP126Q9P2H0 1117 aa14.73□□□□□ -0.05
COL11A1-210ENST00000512756 CCDC61Q9Y6R9 512 aa14.73□□□□□ -0.05
COL11A1-210ENST00000512756 NKTRP30414 1462 aaKnown RBP14.73□□□□□ -0.05
COL11A1-210ENST00000512756 RAB11FIP3O75154 756 aa14.73□□□□□ -0.05
COL11A1-210ENST00000512756 MAP4K4O95819 1239 aaPredicted RBP14.73□□□□□ -0.05
COL11A1-210ENST00000512756 CWC27Q6UX04 472 aaKnown RBP14.73□□□□□ -0.05
COL11A1-210ENST00000512756 KIF1BPQ96EK5 621 aa14.72□□□□□ -0.05
COL11A1-210ENST00000512756 BCL11BQ9C0K0 894 aaPredicted RBP14.72□□□□□ -0.05
COL11A1-210ENST00000512756 FAM177BA6PVY3 158 aa14.72□□□□□ -0.05
COL11A1-210ENST00000512756 BTBD11A6QL63 1104 aa14.72□□□□□ -0.05
COL11A1-210ENST00000512756 H0YHG0 523 aa14.72□□□□□ -0.05
COL11A1-210ENST00000512756 RRS1Q15050 365 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms