RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 NME9Q86XW9 330 aa11.72□□□□□ -0.53
CPNE4-210ENST00000512332 TMEM57Q8N5G2 664 aa11.72□□□□□ -0.53
CPNE4-210ENST00000512332 PHACTR3Q96KR7 559 aa11.72□□□□□ -0.53
CPNE4-210ENST00000512332 TBC1D32Q96NH3 1257 aa11.72□□□□□ -0.53
CPNE4-210ENST00000512332 AKAP12Q02952 1782 aa11.71□□□□□ -0.53
CPNE4-210ENST00000512332 EMILIN1Q9Y6C2 1016 aa11.71□□□□□ -0.53
CPNE4-210ENST00000512332 PIK3R4Q99570 1358 aa11.71□□□□□ -0.53
CPNE4-210ENST00000512332 C3P01024 1663 aa11.71□□□□□ -0.54
CPNE4-210ENST00000512332 VAMP4O75379 141 aa11.71□□□□□ -0.54
CPNE4-210ENST00000512332 KIF13AQ9H1H9 1805 aa11.71□□□□□ -0.54
CPNE4-210ENST00000512332 FBLN1P23142 703 aa11.7□□□□□ -0.54
CPNE4-210ENST00000512332 UBR1Q8IWV7 1749 aa11.69□□□□□ -0.54
CPNE4-210ENST00000512332 HMOX1P09601 288 aa11.69□□□□□ -0.54
CPNE4-210ENST00000512332 PTCH1Q13635 1447 aa11.69□□□□□ -0.54
CPNE4-210ENST00000512332 ADAMTS13Q76LX8 1427 aa11.69□□□□□ -0.54
CPNE4-210ENST00000512332 CFAP44Q96MT7 982 aa11.69□□□□□ -0.54
CPNE4-210ENST00000512332 PLEKHG3A1L390 1219 aa11.68□□□□□ -0.54
CPNE4-210ENST00000512332 MRPL50Q8N5N7 158 aaKnown RBP11.68□□□□□ -0.54
CPNE4-210ENST00000512332 ITSN1Q15811 1721 aa11.68□□□□□ -0.54
CPNE4-210ENST00000512332 ROBO2Q9HCK4 1378 aa11.68□□□□□ -0.54
CPNE4-210ENST00000512332 PLEKHG1Q9ULL1 1385 aa11.68□□□□□ -0.54
CPNE4-210ENST00000512332 PRR36Q9H6K5 1346 aa11.68□□□□□ -0.54
CPNE4-210ENST00000512332 ZBTB7BO15156 539 aaPredicted RBP11.67□□□□□ -0.54
CPNE4-210ENST00000512332 NUCB1Q02818 461 aa11.67□□□□□ -0.54
CPNE4-210ENST00000512332 ZRANB1Q9UGI0 708 aa11.67□□□□□ -0.54
CPNE4-210ENST00000512332 MBIPQ9NS73 344 aa11.67□□□□□ -0.54
CPNE4-210ENST00000512332 NRKQ7Z2Y5 1582 aa11.67□□□□□ -0.54
CPNE4-210ENST00000512332 KIF24Q5T7B8 1368 aa11.66□□□□□ -0.54
CPNE4-210ENST00000512332 ABCC4O15439 1325 aa11.66□□□□□ -0.54
CPNE4-210ENST00000512332 TTC21BQ7Z4L5 1316 aa11.66□□□□□ -0.54
CPNE4-210ENST00000512332 NCKAP5LQ9HCH0 1330 aa11.66□□□□□ -0.54
CPNE4-210ENST00000512332 GSE1Q14687 1217 aa11.66□□□□□ -0.54
CPNE4-210ENST00000512332 GCC1Q96CN9 775 aa11.66□□□□□ -0.54
CPNE4-210ENST00000512332 TOPAZ1Q8N9V7 1692 aa11.65□□□□□ -0.54
CPNE4-210ENST00000512332 HAP1P54257 671 aaPredicted RBP11.65□□□□□ -0.54
CPNE4-210ENST00000512332 RRS1Q15050 365 aaKnown RBP11.65□□□□□ -0.54
CPNE4-210ENST00000512332 TSPYL6Q8N831 410 aa11.65□□□□□ -0.54
CPNE4-210ENST00000512332 OVOS2A0A0J9YW53 1432 aa11.65□□□□□ -0.54
CPNE4-210ENST00000512332 OVOS2Q6IE36 1432 aa11.65□□□□□ -0.54
CPNE4-210ENST00000512332 TWISTNBQ3B726 338 aaPredicted RBP11.64□□□□□ -0.55
CPNE4-210ENST00000512332 THUMPD2Q9BTF0 503 aaKnown RBP11.64□□□□□ -0.55
CPNE4-210ENST00000512332 USP31Q70CQ4 1352 aa11.64□□□□□ -0.55
CPNE4-210ENST00000512332 DLG5Q8TDM6 1919 aa11.64□□□□□ -0.55
CPNE4-210ENST00000512332 CHD1LQ86WJ1 897 aa11.64□□□□□ -0.55
CPNE4-210ENST00000512332 API5Q9BZZ5 524 aaKnown RBP11.64□□□□□ -0.55
CPNE4-210ENST00000512332 ANTXR1Q9H6X2 564 aa11.64□□□□□ -0.55
CPNE4-210ENST00000512332 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.63□□□□□ -0.55
CPNE4-210ENST00000512332 USP6P35125 1406 aa11.63□□□□□ -0.55
CPNE4-210ENST00000512332 SSH2Q76I76 1423 aa11.63□□□□□ -0.55
CPNE4-210ENST00000512332 ACEP12821 1306 aa11.63□□□□□ -0.55
CPNE4-210ENST00000512332 LTKP29376 864 aa11.63□□□□□ -0.55
CPNE4-210ENST00000512332 EIF4A2Q14240 407 aaKnown RBP11.63□□□□□ -0.55
CPNE4-210ENST00000512332 TBC1D2Q9BYX2 928 aa11.63□□□□□ -0.55
CPNE4-210ENST00000512332 C22orf23Q9BZE7 217 aa11.63□□□□□ -0.55
CPNE4-210ENST00000512332 FRAT2O75474 233 aaPredicted RBP11.62□□□□□ -0.55
CPNE4-210ENST00000512332 C8orf58Q8NAV2 365 aa11.62□□□□□ -0.55
CPNE4-210ENST00000512332 NALCNQ8IZF0 1738 aa11.62□□□□□ -0.55
CPNE4-210ENST00000512332 BMP2KLQ5H9B9 411 aa11.62□□□□□ -0.55
CPNE4-210ENST00000512332 SLIT1O75093 1534 aa11.61□□□□□ -0.55
CPNE4-210ENST00000512332 KIAA0232Q92628 1395 aa11.61□□□□□ -0.55
CPNE4-210ENST00000512332 CHL1O00533 1208 aa11.61□□□□□ -0.55
CPNE4-210ENST00000512332 TBX22Q9Y458 520 aa11.61□□□□□ -0.55
CPNE4-210ENST00000512332 TTC21AQ8NDW8 1320 aa11.61□□□□□ -0.55
CPNE4-210ENST00000512332 ARHGAP23Q9P227 1491 aa11.61□□□□□ -0.55
CPNE4-210ENST00000512332 RBM25P49756 843 aaKnown RBP11.6□□□□□ -0.55
CPNE4-210ENST00000512332 EID1Q9Y6B2 187 aa11.6□□□□□ -0.55
CPNE4-210ENST00000512332 SULT6B1Q6IMI4 303 aa11.6□□□□□ -0.55
CPNE4-210ENST00000512332 PTPRUQ92729 1446 aa11.6□□□□□ -0.55
CPNE4-210ENST00000512332 RGPD1P0DJD0 1748 aa11.6□□□□□ -0.55
CPNE4-210ENST00000512332 FAM83GA6ND36 823 aa11.59□□□□□ -0.55
CPNE4-210ENST00000512332 INTS3Q68E01 1043 aaKnown RBP11.59□□□□□ -0.55
CPNE4-210ENST00000512332 ELL2O00472 640 aaPredicted RBP11.59□□□□□ -0.55
CPNE4-210ENST00000512332 SIRT2Q8IXJ6 389 aa11.59□□□□□ -0.55
CPNE4-210ENST00000512332 LNPKQ9C0E8 428 aa11.59□□□□□ -0.55
CPNE4-210ENST00000512332 ARHGEF10O15013 1369 aa11.58□□□□□ -0.56
CPNE4-210ENST00000512332 MFAP1P55081 439 aaKnown RBP11.58□□□□□ -0.56
CPNE4-210ENST00000512332 EIF5BO60841 1220 aaKnown RBP11.58□□□□□ -0.56
CPNE4-210ENST00000512332 AEBP1Q8IUX7 1158 aa11.58□□□□□ -0.56
CPNE4-210ENST00000512332 HSP90AB2PQ58FF8 381 aa11.57□□□□□ -0.56
CPNE4-210ENST00000512332 ANKRD45Q5TZF3 282 aa11.57□□□□□ -0.56
CPNE4-210ENST00000512332 AMOTL2Q9Y2J4 779 aa11.57□□□□□ -0.56
CPNE4-210ENST00000512332 DIP2AQ14689 1571 aa11.57□□□□□ -0.56
CPNE4-210ENST00000512332 PEAK1Q9H792 1746 aa11.57□□□□□ -0.56
CPNE4-210ENST00000512332 DCTN1Q14203 1278 aa11.56□□□□□ -0.56
CPNE4-210ENST00000512332 SNX21Q969T3 373 aa11.56□□□□□ -0.56
CPNE4-210ENST00000512332 SLKQ9H2G2 1235 aaPredicted RBP11.56□□□□□ -0.56
CPNE4-210ENST00000512332 PTPRCP08575 1304 aa11.56□□□□□ -0.56
CPNE4-210ENST00000512332 KDRP35968 1356 aa11.56□□□□□ -0.56
CPNE4-210ENST00000512332 DCTPP1Q9H773 170 aa11.56□□□□□ -0.56
CPNE4-210ENST00000512332 SBNO1A3KN83 1393 aa11.56□□□□□ -0.56
CPNE4-210ENST00000512332 CRB1P82279 1406 aa11.56□□□□□ -0.56
CPNE4-210ENST00000512332 RPAP2Q8IXW5 612 aaPredicted RBP11.55□□□□□ -0.56
CPNE4-210ENST00000512332 SLC26A8Q96RN1 970 aa11.55□□□□□ -0.56
CPNE4-210ENST00000512332 FLT4P35916 1363 aa11.55□□□□□ -0.56
CPNE4-210ENST00000512332 THEMISQ8N1K5 641 aaPredicted RBP11.55□□□□□ -0.56
CPNE4-210ENST00000512332 RGS12O14924 1447 aa11.55□□□□□ -0.56
CPNE4-210ENST00000512332 MAP3K19Q56UN5 1328 aa11.54□□□□□ -0.56
CPNE4-210ENST00000512332 C1orf115Q9H7X2 142 aa11.54□□□□□ -0.56
CPNE4-210ENST00000512332 ANKARQ7Z5J8 1434 aa11.54□□□□□ -0.56
CPNE4-210ENST00000512332 HTATSF1O43719 755 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms