RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 ATMINO43313 823 aaPredicted RBP12.45□□□□□ -0.42
PDPN-209ENST00000510906 IRX5P78411 483 aaPredicted RBP12.45□□□□□ -0.42
PDPN-209ENST00000510906 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
PDPN-209ENST00000510906 MICALL2Q8IY33 904 aa12.45□□□□□ -0.42
PDPN-209ENST00000510906 IER5LQ5T953 404 aa12.44□□□□□ -0.42
PDPN-209ENST00000510906 PPP1R15BQ5SWA1 713 aa12.43□□□□□ -0.42
PDPN-209ENST00000510906 KRT28Q7Z3Y7 464 aa12.43□□□□□ -0.42
PDPN-209ENST00000510906 SIN3AQ96ST3 1273 aa12.43□□□□□ -0.42
PDPN-209ENST00000510906 NBPF1Q3BBV0 1214 aa12.42□□□□□ -0.42
PDPN-209ENST00000510906 NGLY1Q96IV0 654 aa12.42□□□□□ -0.42
PDPN-209ENST00000510906 TMEM121BQ9BXQ6 578 aaPredicted RBP12.42□□□□□ -0.42
PDPN-209ENST00000510906 ANKARQ7Z5J8 1434 aa12.42□□□□□ -0.42
PDPN-209ENST00000510906 ADGRB2O60241 1585 aa12.42□□□□□ -0.42
PDPN-209ENST00000510906 SPATA31A3Q5VYP0 1347 aa12.41□□□□□ -0.42
PDPN-209ENST00000510906 PRR36Q9H6K5 1346 aa12.41□□□□□ -0.42
PDPN-209ENST00000510906 WASLO00401 505 aaPredicted RBP12.41□□□□□ -0.42
PDPN-209ENST00000510906 PMFBP1Q8TBY8 1022 aa12.41□□□□□ -0.42
PDPN-209ENST00000510906 L3MBTL2Q969R5 705 aa12.41□□□□□ -0.42
PDPN-209ENST00000510906 KIF1AQ12756 1690 aa12.41□□□□□ -0.42
PDPN-209ENST00000510906 RXRBP28702 533 aa12.4□□□□□ -0.42
PDPN-209ENST00000510906 NEUROD1Q13562 356 aa12.4□□□□□ -0.42
PDPN-209ENST00000510906 USP32Q8NFA0 1604 aa12.4□□□□□ -0.42
PDPN-209ENST00000510906 COL22A1Q8NFW1 1626 aaPredicted RBP12.4□□□□□ -0.42
PDPN-209ENST00000510906 OCEL1Q9H607 264 aa12.39□□□□□ -0.43
PDPN-209ENST00000510906 QTRT2Q9H974 415 aaKnown RBP12.39□□□□□ -0.43
PDPN-209ENST00000510906 TNS3Q68CZ2 1445 aa12.38□□□□□ -0.43
PDPN-209ENST00000510906 TULP4Q9NRJ4 1543 aa12.38□□□□□ -0.43
PDPN-209ENST00000510906 PSME1Q06323 249 aa12.38□□□□□ -0.43
PDPN-209ENST00000510906 EIF3AQ14152 1382 aaKnown RBP12.38□□□□□ -0.43
PDPN-209ENST00000510906 ARHGEF28Q8N1W1 1705 aaKnown RBP12.37□□□□□ -0.43
PDPN-209ENST00000510906 DSG2Q14126 1118 aa12.37□□□□□ -0.43
PDPN-209ENST00000510906 FNBP4Q8N3X1 1017 aaPredicted RBP12.37□□□□□ -0.43
PDPN-209ENST00000510906 ZC3H15Q8WU90 426 aaKnown RBP12.37□□□□□ -0.43
PDPN-209ENST00000510906 USP21Q9UK80 565 aa12.37□□□□□ -0.43
PDPN-209ENST00000510906 SBNO1A3KN83 1393 aa12.37□□□□□ -0.43
PDPN-209ENST00000510906 RGPD8O14715 1765 aaPredicted RBP12.37□□□□□ -0.43
PDPN-209ENST00000510906 RBM6P78332 1123 aaKnown RBP12.36□□□□□ -0.43
PDPN-209ENST00000510906 FOXK1P85037 733 aa12.36□□□□□ -0.43
PDPN-209ENST00000510906 CABLES1Q8TDN4 633 aa12.36□□□□□ -0.43
PDPN-209ENST00000510906 KIAA1210Q9ULL0 1709 aa12.36□□□□□ -0.43
PDPN-209ENST00000510906 TRIM26Q12899 539 aaPredicted RBP12.35□□□□□ -0.43
PDPN-209ENST00000510906 SMYD5Q6GMV2 418 aa12.35□□□□□ -0.43
PDPN-209ENST00000510906 NUDT16Q96DE0 195 aaKnown RBP12.35□□□□□ -0.43
PDPN-209ENST00000510906 CDK19Q9BWU1 502 aa12.35□□□□□ -0.43
PDPN-209ENST00000510906 BOLA1Q9Y3E2 137 aa12.35□□□□□ -0.43
PDPN-209ENST00000510906 ATP7BP35670 1465 aa12.34□□□□□ -0.43
PDPN-209ENST00000510906 CDK12Q9NYV4 1490 aaPredicted RBP12.34□□□□□ -0.43
PDPN-209ENST00000510906 GPRASP1Q5JY77 1395 aa12.34□□□□□ -0.43
PDPN-209ENST00000510906 KIF3CO14782 793 aa12.34□□□□□ -0.43
PDPN-209ENST00000510906 NGDNQ8NEJ9 315 aaKnown RBP12.34□□□□□ -0.43
PDPN-209ENST00000510906 EMILIN3Q9NT22 766 aa12.34□□□□□ -0.43
PDPN-209ENST00000510906 TRPC5Q9UL62 973 aaPredicted RBP12.34□□□□□ -0.43
PDPN-209ENST00000510906 RGS12O14924 1447 aa12.34□□□□□ -0.43
PDPN-209ENST00000510906 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
PDPN-209ENST00000510906 ARHGEF10O15013 1369 aa12.33□□□□□ -0.44
PDPN-209ENST00000510906 ATRNO75882 1429 aa12.33□□□□□ -0.44
PDPN-209ENST00000510906 CENPJQ9HC77 1338 aaPredicted RBP12.33□□□□□ -0.44
PDPN-209ENST00000510906 TMC2Q8TDI7 906 aa12.32□□□□□ -0.44
PDPN-209ENST00000510906 GABBR2O75899 941 aa12.31□□□□□ -0.44
PDPN-209ENST00000510906 NBPF8Q3BBV2 869 aa12.31□□□□□ -0.44
PDPN-209ENST00000510906 SLIT2O94813 1529 aa12.31□□□□□ -0.44
PDPN-209ENST00000510906 PDIA6Q15084 440 aa12.3□□□□□ -0.44
PDPN-209ENST00000510906 TRPM3Q9HCF6 1732 aaPredicted RBP12.3□□□□□ -0.44
PDPN-209ENST00000510906 ROCK2O75116 1388 aaKnown RBP12.3□□□□□ -0.44
PDPN-209ENST00000510906 SRPK2P78362 688 aaKnown RBP12.29□□□□□ -0.44
PDPN-209ENST00000510906 UNC5CLQ8IV45 518 aa12.29□□□□□ -0.44
PDPN-209ENST00000510906 ACEP12821 1306 aa12.29□□□□□ -0.44
PDPN-209ENST00000510906 TRPM1Q7Z4N2 1603 aa12.29□□□□□ -0.44
PDPN-209ENST00000510906 POLR3AO14802 1390 aaPredicted RBP12.29□□□□□ -0.44
PDPN-209ENST00000510906 PLEKHG3A1L390 1219 aa12.28□□□□□ -0.44
PDPN-209ENST00000510906 DPYSL4O14531 572 aa12.28□□□□□ -0.44
PDPN-209ENST00000510906 PLCG2P16885 1265 aa12.28□□□□□ -0.44
PDPN-209ENST00000510906 GJD4Q96KN9 370 aaPredicted RBP12.28□□□□□ -0.44
PDPN-209ENST00000510906 MARF1Q9Y4F3 1742 aaKnown RBP12.28□□□□□ -0.44
PDPN-209ENST00000510906 ALS2Q96Q42 1657 aa12.27□□□□□ -0.45
PDPN-209ENST00000510906 C2orf72A6NCS6 295 aa12.27□□□□□ -0.45
PDPN-209ENST00000510906 FAM83GA6ND36 823 aa12.27□□□□□ -0.45
PDPN-209ENST00000510906 SPDYE16A6NNV3 312 aaPredicted RBP12.27□□□□□ -0.45
PDPN-209ENST00000510906 ZMYND10O75800 440 aa12.27□□□□□ -0.45
PDPN-209ENST00000510906 MLLT3P42568 568 aaPredicted RBP12.27□□□□□ -0.45
PDPN-209ENST00000510906 TONSLQ96HA7 1378 aa12.27□□□□□ -0.45
PDPN-209ENST00000510906 TOPAZ1Q8N9V7 1692 aa12.26□□□□□ -0.45
PDPN-209ENST00000510906 ABCA3Q99758 1704 aa12.26□□□□□ -0.45
PDPN-209ENST00000510906 PPIP5K1Q6PFW1 1433 aa12.26□□□□□ -0.45
PDPN-209ENST00000510906 RALGAPBQ86X10 1494 aa12.26□□□□□ -0.45
PDPN-209ENST00000510906 ITSN1Q15811 1721 aa12.25□□□□□ -0.45
PDPN-209ENST00000510906 NUTM2GQ5VZR2 741 aa12.25□□□□□ -0.45
PDPN-209ENST00000510906 PLPP6Q8IY26 295 aa12.25□□□□□ -0.45
PDPN-209ENST00000510906 PELP1Q8IZL8 1130 aaKnown RBP12.25□□□□□ -0.45
PDPN-209ENST00000510906 L3MBTL3Q96JM7 780 aaPredicted RBP12.25□□□□□ -0.45
PDPN-209ENST00000510906 QRICH2Q9H0J4 1663 aa12.25□□□□□ -0.45
PDPN-209ENST00000510906 VPS72Q15906 364 aa12.24□□□□□ -0.45
PDPN-209ENST00000510906 EVC2Q86UK5 1308 aa12.24□□□□□ -0.45
PDPN-209ENST00000510906 CABP1Q9NZU7 370 aa12.24□□□□□ -0.45
PDPN-209ENST00000510906 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.23□□□□□ -0.45
PDPN-209ENST00000510906 GLI3P10071 1580 aa12.23□□□□□ -0.45
PDPN-209ENST00000510906 G3V3G9 751 aa12.23□□□□□ -0.45
PDPN-209ENST00000510906 CARD11Q9BXL7 1154 aa12.23□□□□□ -0.45
PDPN-209ENST00000510906 BTG4Q9NY30 223 aa12.23□□□□□ -0.45
PDPN-209ENST00000510906 CCDC9Q9Y3X0 531 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms