RNA–Protein interactions for RNA: ENST00000510102.5

YIPF3-214, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-214ENST00000510102 TMEM94Q12767 1356 aa21.71■■□□□ 1.07
YIPF3-214ENST00000510102 PAK3O75914 559 aaPredicted RBP21.7■■□□□ 1.06
YIPF3-214ENST00000510102 ARHGEF10O15013 1369 aa21.69■■□□□ 1.06
YIPF3-214ENST00000510102 RTL1A6NKG5 1358 aa21.68■■□□□ 1.06
YIPF3-214ENST00000510102 HSP90AB2PQ58FF8 381 aa21.68■■□□□ 1.06
YIPF3-214ENST00000510102 TRPM3Q9HCF6 1732 aaPredicted RBP21.68■■□□□ 1.06
YIPF3-214ENST00000510102 MST1RQ04912 1400 aa21.67■■□□□ 1.06
YIPF3-214ENST00000510102 CT47B1P0C2W7 299 aaPredicted RBP21.67■■□□□ 1.06
YIPF3-214ENST00000510102 AMPHP49418 695 aa21.67■■□□□ 1.06
YIPF3-214ENST00000510102 ORAI2Q96SN7 254 aa21.67■■□□□ 1.06
YIPF3-214ENST00000510102 SOX12O15370 315 aa21.66■■□□□ 1.06
YIPF3-214ENST00000510102 ATF3P18847 181 aa21.66■■□□□ 1.06
YIPF3-214ENST00000510102 CALD1Q05682 793 aaKnown RBP21.66■■□□□ 1.06
YIPF3-214ENST00000510102 LMOD3Q0VAK6 560 aa21.66■■□□□ 1.06
YIPF3-214ENST00000510102 PHACTR3Q96KR7 559 aa21.66■■□□□ 1.06
YIPF3-214ENST00000510102 NFAT5O94916 1531 aa21.66■■□□□ 1.06
YIPF3-214ENST00000510102 PLIN1O60240 522 aa21.66■■□□□ 1.06
YIPF3-214ENST00000510102 B4GALNT3Q6L9W6 998 aa21.66■■□□□ 1.06
YIPF3-214ENST00000510102 DLG5Q8TDM6 1919 aa21.66■■□□□ 1.06
YIPF3-214ENST00000510102 EXOC6Q8TAG9 804 aa21.65■■□□□ 1.06
YIPF3-214ENST00000510102 PHRF1Q9P1Y6 1649 aaKnown RBP21.65■■□□□ 1.06
YIPF3-214ENST00000510102 LTN1O94822 1766 aa21.64■■□□□ 1.06
YIPF3-214ENST00000510102 KCNH5Q8NCM2 988 aa21.64■■□□□ 1.05
YIPF3-214ENST00000510102 CCDC136Q96JN2 1154 aa21.64■■□□□ 1.05
YIPF3-214ENST00000510102 FANCIQ9NVI1 1328 aa21.64■■□□□ 1.05
YIPF3-214ENST00000510102 NUTM2GQ5VZR2 741 aa21.63■■□□□ 1.05
YIPF3-214ENST00000510102 SULT6B1Q6IMI4 303 aa21.63■■□□□ 1.05
YIPF3-214ENST00000510102 CADPS2Q86UW7 1296 aa21.63■■□□□ 1.05
YIPF3-214ENST00000510102 SLIT3O75094 1523 aa21.63■■□□□ 1.05
YIPF3-214ENST00000510102 XIRP1Q702N8 1843 aaKnown RBP21.62■■□□□ 1.05
YIPF3-214ENST00000510102 KDRP35968 1356 aa21.62■■□□□ 1.05
YIPF3-214ENST00000510102 FOXO3O43524 673 aa21.62■■□□□ 1.05
YIPF3-214ENST00000510102 HOXC9P31274 260 aa21.62■■□□□ 1.05
YIPF3-214ENST00000510102 MSH6P52701 1360 aa21.62■■□□□ 1.05
YIPF3-214ENST00000510102 IGSF1Q8N6C5 1336 aa21.61■■□□□ 1.05
YIPF3-214ENST00000510102 RARSP54136 660 aaKnown RBP21.6■■□□□ 1.05
YIPF3-214ENST00000510102 BCAR3O75815 825 aa21.59■■□□□ 1.05
YIPF3-214ENST00000510102 KRT28Q7Z3Y7 464 aa21.59■■□□□ 1.05
YIPF3-214ENST00000510102 AEBP1Q8IUX7 1158 aa21.59■■□□□ 1.05
YIPF3-214ENST00000510102 CRBNQ96SW2 442 aa21.59■■□□□ 1.05
YIPF3-214ENST00000510102 ALS2Q96Q42 1657 aa21.59■■□□□ 1.05
YIPF3-214ENST00000510102 USP19O94966 1318 aa21.58■■□□□ 1.04
YIPF3-214ENST00000510102 PDE3AQ14432 1141 aa21.57■■□□□ 1.04
YIPF3-214ENST00000510102 TSR2Q969E8 191 aaKnown RBP21.57■■□□□ 1.04
YIPF3-214ENST00000510102 C20orf194Q5TEA3 1177 aa21.56■■□□□ 1.04
YIPF3-214ENST00000510102 IP6K1Q92551 441 aa21.56■■□□□ 1.04
YIPF3-214ENST00000510102 EYA1Q99502 592 aa21.56■■□□□ 1.04
YIPF3-214ENST00000510102 IFT57Q9NWB7 429 aa21.56■■□□□ 1.04
YIPF3-214ENST00000510102 GNAI1P63096 354 aa21.55■■□□□ 1.04
YIPF3-214ENST00000510102 EXOSC9Q06265 439 aaKnown RBP21.55■■□□□ 1.04
YIPF3-214ENST00000510102 ZNF853P0CG23 659 aa21.53■■□□□ 1.04
YIPF3-214ENST00000510102 NPHP3Q7Z494 1330 aa21.53■■□□□ 1.04
YIPF3-214ENST00000510102 XPCQ01831 940 aaPredicted RBP21.52■■□□□ 1.04
YIPF3-214ENST00000510102 ZNF428Q96B54 188 aa21.52■■□□□ 1.04
YIPF3-214ENST00000510102 GCP02774 474 aa21.51■■□□□ 1.03
YIPF3-214ENST00000510102 CANXP27824 592 aaKnown RBP21.51■■□□□ 1.03
YIPF3-214ENST00000510102 CFAP44Q96MT7 982 aa21.51■■□□□ 1.03
YIPF3-214ENST00000510102 ARHGEF25Q86VW2 580 aa21.5■■□□□ 1.03
YIPF3-214ENST00000510102 GAS2L2Q8NHY3 880 aa21.5■■□□□ 1.03
YIPF3-214ENST00000510102 THUMPD2Q9BTF0 503 aaKnown RBP21.48■■□□□ 1.03
YIPF3-214ENST00000510102 ZNF335Q9H4Z2 1342 aaPredicted RBP21.48■■□□□ 1.03
YIPF3-214ENST00000510102 PXDNQ92626 1479 aa21.48■■□□□ 1.03
YIPF3-214ENST00000510102 ALDH1L2Q3SY69 923 aa21.47■■□□□ 1.03
YIPF3-214ENST00000510102 TNS3Q68CZ2 1445 aa21.47■■□□□ 1.03
YIPF3-214ENST00000510102 LMOD2Q6P5Q4 547 aa21.47■■□□□ 1.03
YIPF3-214ENST00000510102 MED1Q15648 1581 aaPredicted RBP21.47■■□□□ 1.03
YIPF3-214ENST00000510102 MS4A1P11836 297 aa21.47■■□□□ 1.03
YIPF3-214ENST00000510102 TSHZ2Q9NRE2 1034 aa21.47■■□□□ 1.03
YIPF3-214ENST00000510102 LAS1LQ9Y4W2 734 aaKnown RBP21.47■■□□□ 1.03
YIPF3-214ENST00000510102 HTATSF1O43719 755 aaKnown RBP21.46■■□□□ 1.03
YIPF3-214ENST00000510102 AAMPQ13685 434 aa21.46■■□□□ 1.03
YIPF3-214ENST00000510102 MBIPQ9NS73 344 aa21.46■■□□□ 1.03
YIPF3-214ENST00000510102 FAM83GA6ND36 823 aa21.45■■□□□ 1.02
YIPF3-214ENST00000510102 MTHFSDQ2M296 383 aaKnown RBP21.45■■□□□ 1.02
YIPF3-214ENST00000510102 FRAT1Q92837 279 aaPredicted RBP21.45■■□□□ 1.02
YIPF3-214ENST00000510102 SMC4Q9NTJ3 1288 aa21.45■■□□□ 1.02
YIPF3-214ENST00000510102 ZKSCAN2Q63HK3 967 aa21.44■■□□□ 1.02
YIPF3-214ENST00000510102 LTV1Q96GA3 475 aaPredicted RBP21.44■■□□□ 1.02
YIPF3-214ENST00000510102 CAMTA1Q9Y6Y1 1673 aa21.44■■□□□ 1.02
YIPF3-214ENST00000510102 NCAPD2Q15021 1401 aa21.44■■□□□ 1.02
YIPF3-214ENST00000510102 BRPF1P55201 1214 aaPredicted RBP21.44■■□□□ 1.02
YIPF3-214ENST00000510102 SSH1Q8WYL5 1049 aa21.44■■□□□ 1.02
YIPF3-214ENST00000510102 ABCC6O95255 1503 aa21.43■■□□□ 1.02
YIPF3-214ENST00000510102 LRRC37A3O60309 1634 aa21.43■■□□□ 1.02
YIPF3-214ENST00000510102 RTF1Q92541 710 aaKnown RBP21.43■■□□□ 1.02
YIPF3-214ENST00000510102 BCL2L13Q9BXK5 485 aa21.43■■□□□ 1.02
YIPF3-214ENST00000510102 KIF16BQ96L93 1317 aa21.43■■□□□ 1.02
YIPF3-214ENST00000510102 CRYBG1Q9Y4K1 1723 aa21.42■■□□□ 1.02
YIPF3-214ENST00000510102 DCTN1Q14203 1278 aa21.42■■□□□ 1.02
YIPF3-214ENST00000510102 CRB1P82279 1406 aa21.42■■□□□ 1.02
YIPF3-214ENST00000510102 BRINP3Q76B58 766 aa21.41■■□□□ 1.02
YIPF3-214ENST00000510102 SPATA31A3Q5VYP0 1347 aa21.41■■□□□ 1.02
YIPF3-214ENST00000510102 RGPD2P0DJD1 1756 aa21.41■■□□□ 1.02
YIPF3-214ENST00000510102 CHL1O00533 1208 aa21.4■■□□□ 1.02
YIPF3-214ENST00000510102 VAMP4O75379 141 aa21.4■■□□□ 1.02
YIPF3-214ENST00000510102 PANK1Q8TE04 598 aa21.4■■□□□ 1.02
YIPF3-214ENST00000510102 ZBTB7CA1YPR0 619 aa21.4■■□□□ 1.02
YIPF3-214ENST00000510102 HAP1P54257 671 aaPredicted RBP21.4■■□□□ 1.02
YIPF3-214ENST00000510102 MCM10Q7L590 875 aa21.4■■□□□ 1.02
YIPF3-214ENST00000510102 IPO8O15397 1037 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms