RNA–Protein interactions for RNA: ENST00000509507.5

CALCOCO2-215, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-215ENST00000509507 EP400Q96L91 3159 aa11.4□□□□□ -0.59
CALCOCO2-215ENST00000509507 AKAP12Q02952 1782 aa11.39□□□□□ -0.59
CALCOCO2-215ENST00000509507 SPATA31A3Q5VYP0 1347 aa11.39□□□□□ -0.59
CALCOCO2-215ENST00000509507 EVC2Q86UK5 1308 aa11.39□□□□□ -0.59
CALCOCO2-215ENST00000509507 SBNO1A3KN83 1393 aa11.39□□□□□ -0.59
CALCOCO2-215ENST00000509507 USP47Q96K76 1375 aa11.38□□□□□ -0.59
CALCOCO2-215ENST00000509507 ESPNB1AK53 854 aa11.38□□□□□ -0.59
CALCOCO2-215ENST00000509507 SLC4A3P48751 1232 aa11.38□□□□□ -0.59
CALCOCO2-215ENST00000509507 AAMPQ13685 434 aa11.38□□□□□ -0.59
CALCOCO2-215ENST00000509507 LMOD2Q6P5Q4 547 aa11.38□□□□□ -0.59
CALCOCO2-215ENST00000509507 MTERF4Q7Z6M4 381 aaKnown RBP11.38□□□□□ -0.59
CALCOCO2-215ENST00000509507 PRDM4Q9UKN5 801 aa11.38□□□□□ -0.59
CALCOCO2-215ENST00000509507 CCDC61Q9Y6R9 512 aa11.38□□□□□ -0.59
CALCOCO2-215ENST00000509507 PHRF1Q9P1Y6 1649 aaKnown RBP11.37□□□□□ -0.59
CALCOCO2-215ENST00000509507 POLR3AO14802 1390 aaPredicted RBP11.37□□□□□ -0.59
CALCOCO2-215ENST00000509507 ARHGEF10O15013 1369 aa11.37□□□□□ -0.59
CALCOCO2-215ENST00000509507 ADAMTS2O95450 1211 aa11.37□□□□□ -0.59
CALCOCO2-215ENST00000509507 CRBNQ96SW2 442 aa11.37□□□□□ -0.59
CALCOCO2-215ENST00000509507 RGS17Q9UGC6 210 aaPredicted RBP11.37□□□□□ -0.59
CALCOCO2-215ENST00000509507 ACEP12821 1306 aa11.37□□□□□ -0.59
CALCOCO2-215ENST00000509507 MON2Q7Z3U7 1717 aa11.36□□□□□ -0.59
CALCOCO2-215ENST00000509507 NRKQ7Z2Y5 1582 aa11.36□□□□□ -0.59
CALCOCO2-215ENST00000509507 RBM10P98175 930 aaKnown RBP11.36□□□□□ -0.59
CALCOCO2-215ENST00000509507 NLRP13Q86W25 1043 aa11.36□□□□□ -0.59
CALCOCO2-215ENST00000509507 C8orf37Q96NL8 207 aa11.36□□□□□ -0.59
CALCOCO2-215ENST00000509507 ANTXR1Q9H6X2 564 aa11.36□□□□□ -0.59
CALCOCO2-215ENST00000509507 PLCH1Q4KWH8 1693 aa11.36□□□□□ -0.59
CALCOCO2-215ENST00000509507 PARD3Q8TEW0 1356 aa11.36□□□□□ -0.59
CALCOCO2-215ENST00000509507 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.35□□□□□ -0.59
CALCOCO2-215ENST00000509507 ATAD2Q6PL18 1390 aa11.35□□□□□ -0.59
CALCOCO2-215ENST00000509507 ST20-MTHFSA0A0A6YYL1 179 aa11.35□□□□□ -0.59
CALCOCO2-215ENST00000509507 FGD1P98174 961 aa11.35□□□□□ -0.59
CALCOCO2-215ENST00000509507 SMAP1Q8IYB5 467 aaPredicted RBP11.35□□□□□ -0.59
CALCOCO2-215ENST00000509507 AFF2P51816 1311 aa11.34□□□□□ -0.59
CALCOCO2-215ENST00000509507 MAPK8IP3Q9UPT6 1336 aa11.34□□□□□ -0.59
CALCOCO2-215ENST00000509507 PIK3C2AO00443 1686 aa11.34□□□□□ -0.59
CALCOCO2-215ENST00000509507 PLEKHG3A1L390 1219 aa11.34□□□□□ -0.59
CALCOCO2-215ENST00000509507 NCLP19338 710 aaKnown RBP11.34□□□□□ -0.59
CALCOCO2-215ENST00000509507 HAP1P54257 671 aaPredicted RBP11.34□□□□□ -0.59
CALCOCO2-215ENST00000509507 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
CALCOCO2-215ENST00000509507 MYH16Q9H6N6 1097 aa11.34□□□□□ -0.59
CALCOCO2-215ENST00000509507 CABP1Q9NZU7 370 aa11.34□□□□□ -0.59
CALCOCO2-215ENST00000509507 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.33□□□□□ -0.6
CALCOCO2-215ENST00000509507 PTMSP20962 102 aa11.33□□□□□ -0.6
CALCOCO2-215ENST00000509507 POTEAQ6S8J7 498 aa11.33□□□□□ -0.6
CALCOCO2-215ENST00000509507 USP6P35125 1406 aa11.33□□□□□ -0.6
CALCOCO2-215ENST00000509507 NWD2Q9ULI1 1742 aa11.32□□□□□ -0.6
CALCOCO2-215ENST00000509507 TESK2Q96S53 571 aa11.32□□□□□ -0.6
CALCOCO2-215ENST00000509507 USP19O94966 1318 aa11.32□□□□□ -0.6
CALCOCO2-215ENST00000509507 NINLQ9Y2I6 1382 aa11.32□□□□□ -0.6
CALCOCO2-215ENST00000509507 ZNF772Q68DY9 489 aaPredicted RBP11.31□□□□□ -0.6
CALCOCO2-215ENST00000509507 NGLY1Q96IV0 654 aa11.31□□□□□ -0.6
CALCOCO2-215ENST00000509507 MYOM1P52179 1685 aa11.31□□□□□ -0.6
CALCOCO2-215ENST00000509507 DDX11L8A8MPP1 907 aa11.3□□□□□ -0.6
CALCOCO2-215ENST00000509507 MCM4P33991 863 aa11.3□□□□□ -0.6
CALCOCO2-215ENST00000509507 NUTM2GQ5VZR2 741 aa11.3□□□□□ -0.6
CALCOCO2-215ENST00000509507 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.3□□□□□ -0.6
CALCOCO2-215ENST00000509507 NRAPQ86VF7 1730 aa11.3□□□□□ -0.6
CALCOCO2-215ENST00000509507 COL14A1Q05707 1796 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-215ENST00000509507 CD163L1Q9NR16 1453 aa11.3□□□□□ -0.6
CALCOCO2-215ENST00000509507 UTP14CQ5TAP6 766 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-215ENST00000509507 TRIM44Q96DX7 344 aaPredicted RBP11.3□□□□□ -0.6
CALCOCO2-215ENST00000509507 GRPEL1Q9HAV7 217 aa11.3□□□□□ -0.6
CALCOCO2-215ENST00000509507 CPSF1Q10570 1443 aaKnown RBP11.29□□□□□ -0.6
CALCOCO2-215ENST00000509507 ABTB2Q8N961 1025 aa11.29□□□□□ -0.6
CALCOCO2-215ENST00000509507 USP21Q9UK80 565 aa11.29□□□□□ -0.6
CALCOCO2-215ENST00000509507 SLIT2O94813 1529 aa11.28□□□□□ -0.6
CALCOCO2-215ENST00000509507 SSH2Q76I76 1423 aa11.28□□□□□ -0.6
CALCOCO2-215ENST00000509507 OFD1O75665 1012 aa11.28□□□□□ -0.6
CALCOCO2-215ENST00000509507 TMF1P82094 1093 aa11.28□□□□□ -0.6
CALCOCO2-215ENST00000509507 BCL9LQ86UU0 1499 aa11.27□□□□□ -0.6
CALCOCO2-215ENST00000509507 A0A1W2PP64 1363 aa11.27□□□□□ -0.6
CALCOCO2-215ENST00000509507 USP54Q70EL1 1684 aa11.27□□□□□ -0.61
CALCOCO2-215ENST00000509507 FNBP4Q8N3X1 1017 aaPredicted RBP11.27□□□□□ -0.61
CALCOCO2-215ENST00000509507 UPF2Q9HAU5 1272 aaKnown RBP11.27□□□□□ -0.61
CALCOCO2-215ENST00000509507 HS1BP3Q53T59 392 aa11.26□□□□□ -0.61
CALCOCO2-215ENST00000509507 SLC12A5Q9H2X9 1139 aa11.26□□□□□ -0.61
CALCOCO2-215ENST00000509507 CHMP5Q9NZZ3 219 aa11.26□□□□□ -0.61
CALCOCO2-215ENST00000509507 SLIT3O75094 1523 aa11.26□□□□□ -0.61
CALCOCO2-215ENST00000509507 ATRNO75882 1429 aa11.26□□□□□ -0.61
CALCOCO2-215ENST00000509507 CCDC173Q0VFZ6 552 aa11.25□□□□□ -0.61
CALCOCO2-215ENST00000509507 KIAA1211Q6ZU35 1233 aa11.25□□□□□ -0.61
CALCOCO2-215ENST00000509507 ZNF692Q9BU19 519 aaPredicted RBP11.25□□□□□ -0.61
CALCOCO2-215ENST00000509507 PANK2Q9BZ23 570 aa11.25□□□□□ -0.61
CALCOCO2-215ENST00000509507 QTRT2Q9H974 415 aaKnown RBP11.25□□□□□ -0.61
CALCOCO2-215ENST00000509507 KIF20BQ96Q89 1820 aa11.25□□□□□ -0.61
CALCOCO2-215ENST00000509507 KIAA0232Q92628 1395 aa11.25□□□□□ -0.61
CALCOCO2-215ENST00000509507 GLI3P10071 1580 aa11.25□□□□□ -0.61
CALCOCO2-215ENST00000509507 TTC21BQ7Z4L5 1316 aa11.25□□□□□ -0.61
CALCOCO2-215ENST00000509507 LMO7Q8WWI1 1683 aa11.25□□□□□ -0.61
CALCOCO2-215ENST00000509507 TRAK2O60296 914 aa11.25□□□□□ -0.61
CALCOCO2-215ENST00000509507 HDGFL2Q7Z4V5 671 aaPredicted RBP11.25□□□□□ -0.61
CALCOCO2-215ENST00000509507 PUS7Q96PZ0 661 aaKnown RBP11.25□□□□□ -0.61
CALCOCO2-215ENST00000509507 PPP1R9BQ96SB3 815 aa11.25□□□□□ -0.61
CALCOCO2-215ENST00000509507 EDC4Q6P2E9 1401 aaKnown RBP11.24□□□□□ -0.61
CALCOCO2-215ENST00000509507 LTN1O94822 1766 aa11.24□□□□□ -0.61
CALCOCO2-215ENST00000509507 IBTKQ9P2D0 1353 aaPredicted RBP11.24□□□□□ -0.61
CALCOCO2-215ENST00000509507 ERBB4Q15303 1308 aa11.24□□□□□ -0.61
CALCOCO2-215ENST00000509507 TTC21AQ8NDW8 1320 aa11.24□□□□□ -0.61
CALCOCO2-215ENST00000509507 RXRBP28702 533 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms