RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 LTKP29376 864 aa13.87□□□□□ -0.19
SEC31A-228ENST00000509142 PRR36Q9H6K5 1346 aa13.86□□□□□ -0.19
SEC31A-228ENST00000509142 ZNF428Q96B54 188 aa13.86□□□□□ -0.19
SEC31A-228ENST00000509142 ROBO2Q9HCK4 1378 aa13.86□□□□□ -0.19
SEC31A-228ENST00000509142 TBC1D32Q96NH3 1257 aa13.86□□□□□ -0.19
SEC31A-228ENST00000509142 ACEP12821 1306 aa13.86□□□□□ -0.19
SEC31A-228ENST00000509142 LRRC7Q96NW7 1537 aa13.85□□□□□ -0.19
SEC31A-228ENST00000509142 AATKQ6ZMQ8 1374 aa13.85□□□□□ -0.19
SEC31A-228ENST00000509142 IFT57Q9NWB7 429 aa13.85□□□□□ -0.19
SEC31A-228ENST00000509142 SLKQ9H2G2 1235 aaPredicted RBP13.85□□□□□ -0.19
SEC31A-228ENST00000509142 TTC21BQ7Z4L5 1316 aa13.85□□□□□ -0.19
SEC31A-228ENST00000509142 MAP2P11137 1827 aaKnown RBP13.85□□□□□ -0.19
SEC31A-228ENST00000509142 BECN1Q14457 450 aa13.84□□□□□ -0.19
SEC31A-228ENST00000509142 SULT6B1Q6IMI4 303 aa13.84□□□□□ -0.19
SEC31A-228ENST00000509142 CHMP4BQ9H444 224 aaKnown RBP13.84□□□□□ -0.19
SEC31A-228ENST00000509142 ANO8Q9HCE9 1232 aaPredicted RBP13.84□□□□□ -0.19
SEC31A-228ENST00000509142 TBC1D2Q9BYX2 928 aa13.83□□□□□ -0.2
SEC31A-228ENST00000509142 AMOTL2Q9Y2J4 779 aa13.83□□□□□ -0.2
SEC31A-228ENST00000509142 TECPR2O15040 1411 aa13.83□□□□□ -0.2
SEC31A-228ENST00000509142 HDAC1Q13547 482 aaPredicted RBP13.83□□□□□ -0.2
SEC31A-228ENST00000509142 TWISTNBQ3B726 338 aaPredicted RBP13.83□□□□□ -0.2
SEC31A-228ENST00000509142 NGDNQ8NEJ9 315 aaKnown RBP13.83□□□□□ -0.2
SEC31A-228ENST00000509142 MBIPQ9NS73 344 aa13.83□□□□□ -0.2
SEC31A-228ENST00000509142 NRXN3Q9Y4C0 1643 aa13.83□□□□□ -0.2
SEC31A-228ENST00000509142 FAM83GA6ND36 823 aa13.83□□□□□ -0.2
SEC31A-228ENST00000509142 VAMP4O75379 141 aa13.83□□□□□ -0.2
SEC31A-228ENST00000509142 DCTN1Q14203 1278 aa13.83□□□□□ -0.2
SEC31A-228ENST00000509142 TSPYL6Q8N831 410 aa13.83□□□□□ -0.2
SEC31A-228ENST00000509142 SETD1AO15047 1707 aaKnown RBP13.82□□□□□ -0.2
SEC31A-228ENST00000509142 CDK12Q9NYV4 1490 aaPredicted RBP13.82□□□□□ -0.2
SEC31A-228ENST00000509142 KIF13AQ9H1H9 1805 aa13.82□□□□□ -0.2
SEC31A-228ENST00000509142 CPS1P31327 1500 aa13.82□□□□□ -0.2
SEC31A-228ENST00000509142 CFAP44Q96MT7 982 aa13.82□□□□□ -0.2
SEC31A-228ENST00000509142 ZBTB40Q9NUA8 1239 aa13.82□□□□□ -0.2
SEC31A-228ENST00000509142 PLEKHG1Q9ULL1 1385 aa13.81□□□□□ -0.2
SEC31A-228ENST00000509142 CDC42BPGQ6DT37 1551 aa13.81□□□□□ -0.2
SEC31A-228ENST00000509142 EIF4A2Q14240 407 aaKnown RBP13.81□□□□□ -0.2
SEC31A-228ENST00000509142 AEBP1Q8IUX7 1158 aa13.81□□□□□ -0.2
SEC31A-228ENST00000509142 ADAMTS13Q76LX8 1427 aa13.8□□□□□ -0.2
SEC31A-228ENST00000509142 PLEKHG3A1L390 1219 aa13.8□□□□□ -0.2
SEC31A-228ENST00000509142 THEMISQ8N1K5 641 aaPredicted RBP13.8□□□□□ -0.2
SEC31A-228ENST00000509142 MRPL50Q8N5N7 158 aaKnown RBP13.8□□□□□ -0.2
SEC31A-228ENST00000509142 HSP90AB2PQ58FF8 381 aa13.79□□□□□ -0.2
SEC31A-228ENST00000509142 C8orf58Q8NAV2 365 aa13.79□□□□□ -0.2
SEC31A-228ENST00000509142 LNPKQ9C0E8 428 aa13.78□□□□□ -0.2
SEC31A-228ENST00000509142 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
SEC31A-228ENST00000509142 SMC5Q8IY18 1101 aa13.78□□□□□ -0.2
SEC31A-228ENST00000509142 ARHGAP45Q92619 1136 aa13.78□□□□□ -0.2
SEC31A-228ENST00000509142 API5Q9BZZ5 524 aaKnown RBP13.78□□□□□ -0.2
SEC31A-228ENST00000509142 C1orf115Q9H7X2 142 aa13.78□□□□□ -0.2
SEC31A-228ENST00000509142 ZNF853P0CG23 659 aa13.77□□□□□ -0.2
SEC31A-228ENST00000509142 AMPHP49418 695 aa13.77□□□□□ -0.2
SEC31A-228ENST00000509142 HAP1P54257 671 aaPredicted RBP13.77□□□□□ -0.2
SEC31A-228ENST00000509142 MFAP1P55081 439 aaKnown RBP13.77□□□□□ -0.2
SEC31A-228ENST00000509142 SPRYD3Q8NCJ5 442 aa13.77□□□□□ -0.2
SEC31A-228ENST00000509142 TBX22Q9Y458 520 aa13.77□□□□□ -0.2
SEC31A-228ENST00000509142 BRPF1P55201 1214 aaPredicted RBP13.77□□□□□ -0.21
SEC31A-228ENST00000509142 ANKRD45Q5TZF3 282 aa13.76□□□□□ -0.21
SEC31A-228ENST00000509142 MCM10Q7L590 875 aa13.76□□□□□ -0.21
SEC31A-228ENST00000509142 UBR1Q8IWV7 1749 aa13.76□□□□□ -0.21
SEC31A-228ENST00000509142 RTF1Q92541 710 aaKnown RBP13.76□□□□□ -0.21
SEC31A-228ENST00000509142 USP6P35125 1406 aa13.75□□□□□ -0.21
SEC31A-228ENST00000509142 KNDC1Q76NI1 1749 aa13.75□□□□□ -0.21
SEC31A-228ENST00000509142 ZBTB7BO15156 539 aaPredicted RBP13.75□□□□□ -0.21
SEC31A-228ENST00000509142 C14orf37Q86TY3 774 aa13.75□□□□□ -0.21
SEC31A-228ENST00000509142 ITSN1Q15811 1721 aa13.74□□□□□ -0.21
SEC31A-228ENST00000509142 NLRP6P59044 892 aa13.74□□□□□ -0.21
SEC31A-228ENST00000509142 CHD1LQ86WJ1 897 aa13.74□□□□□ -0.21
SEC31A-228ENST00000509142 TTC21AQ8NDW8 1320 aa13.73□□□□□ -0.21
SEC31A-228ENST00000509142 NUCB1Q02818 461 aa13.73□□□□□ -0.21
SEC31A-228ENST00000509142 PTPRUQ92729 1446 aa13.73□□□□□ -0.21
SEC31A-228ENST00000509142 GCC1Q96CN9 775 aa13.73□□□□□ -0.21
SEC31A-228ENST00000509142 C22orf23Q9BZE7 217 aa13.73□□□□□ -0.21
SEC31A-228ENST00000509142 MON2Q7Z3U7 1717 aa13.73□□□□□ -0.21
SEC31A-228ENST00000509142 MAP3K19Q56UN5 1328 aa13.73□□□□□ -0.21
SEC31A-228ENST00000509142 NUTM2GQ5VZR2 741 aa13.72□□□□□ -0.21
SEC31A-228ENST00000509142 KRT24Q2M2I5 525 aa13.72□□□□□ -0.21
SEC31A-228ENST00000509142 OVOS2A0A0J9YW53 1432 aa13.71□□□□□ -0.22
SEC31A-228ENST00000509142 OVOS2Q6IE36 1432 aa13.71□□□□□ -0.22
SEC31A-228ENST00000509142 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.7□□□□□ -0.22
SEC31A-228ENST00000509142 MIS18AQ9NYP9 233 aa13.7□□□□□ -0.22
SEC31A-228ENST00000509142 C3P01024 1663 aa13.7□□□□□ -0.22
SEC31A-228ENST00000509142 ABCC4O15439 1325 aa13.7□□□□□ -0.22
SEC31A-228ENST00000509142 CHL1O00533 1208 aa13.7□□□□□ -0.22
SEC31A-228ENST00000509142 AKAP12Q02952 1782 aa13.7□□□□□ -0.22
SEC31A-228ENST00000509142 KCNA6P17658 529 aa13.69□□□□□ -0.22
SEC31A-228ENST00000509142 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
SEC31A-228ENST00000509142 TSPYL4Q9UJ04 414 aa13.69□□□□□ -0.22
SEC31A-228ENST00000509142 PTCH1Q13635 1447 aa13.69□□□□□ -0.22
SEC31A-228ENST00000509142 LTV1Q96GA3 475 aaPredicted RBP13.69□□□□□ -0.22
SEC31A-228ENST00000509142 SIRT2Q8IXJ6 389 aa13.69□□□□□ -0.22
SEC31A-228ENST00000509142 FOXO3O43524 673 aa13.68□□□□□ -0.22
SEC31A-228ENST00000509142 ABTB2Q8N961 1025 aa13.68□□□□□ -0.22
SEC31A-228ENST00000509142 FLT4P35916 1363 aa13.68□□□□□ -0.22
SEC31A-228ENST00000509142 MTHFSDQ2M296 383 aaKnown RBP13.68□□□□□ -0.22
SEC31A-228ENST00000509142 GAS2L2Q8NHY3 880 aa13.68□□□□□ -0.22
SEC31A-228ENST00000509142 USP31Q70CQ4 1352 aa13.68□□□□□ -0.22
SEC31A-228ENST00000509142 PIK3R4Q99570 1358 aa13.68□□□□□ -0.22
SEC31A-228ENST00000509142 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
SEC31A-228ENST00000509142 EYA1Q99502 592 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms