RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 PLPPR3Q6T4P5 718 aa12.18□□□□□ -0.46
PDGFRA-207ENST00000509092 DZIP1LQ8IYY4 767 aaKnown RBP12.18□□□□□ -0.46
PDGFRA-207ENST00000509092 CCDC141Q6ZP82 1450 aa12.18□□□□□ -0.46
PDGFRA-207ENST00000509092 RNF17Q9BXT8 1623 aaKnown RBP12.17□□□□□ -0.46
PDGFRA-207ENST00000509092 REREQ9P2R6 1566 aa12.17□□□□□ -0.46
PDGFRA-207ENST00000509092 ZKSCAN2Q63HK3 967 aa12.17□□□□□ -0.46
PDGFRA-207ENST00000509092 MPNDQ8N594 471 aa12.17□□□□□ -0.46
PDGFRA-207ENST00000509092 NUP155O75694 1391 aa12.17□□□□□ -0.46
PDGFRA-207ENST00000509092 ANKRD36BQ8N2N9 1353 aa12.17□□□□□ -0.46
PDGFRA-207ENST00000509092 ADCY5O95622 1261 aa12.17□□□□□ -0.46
PDGFRA-207ENST00000509092 TPM3P06753 285 aa12.17□□□□□ -0.46
PDGFRA-207ENST00000509092 BCL2L13Q9BXK5 485 aa12.17□□□□□ -0.46
PDGFRA-207ENST00000509092 MYOM1P52179 1685 aa12.16□□□□□ -0.46
PDGFRA-207ENST00000509092 USP25Q9UHP3 1055 aa12.16□□□□□ -0.46
PDGFRA-207ENST00000509092 ZDHHC9Q9Y397 364 aa12.16□□□□□ -0.46
PDGFRA-207ENST00000509092 KANK1Q14678 1352 aa12.16□□□□□ -0.46
PDGFRA-207ENST00000509092 ERICH4A6NGS2 130 aa12.16□□□□□ -0.46
PDGFRA-207ENST00000509092 CDC42BPAQ5VT25 1732 aa12.16□□□□□ -0.46
PDGFRA-207ENST00000509092 TBC1D9Q6ZT07 1266 aa12.16□□□□□ -0.46
PDGFRA-207ENST00000509092 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.15□□□□□ -0.46
PDGFRA-207ENST00000509092 TTC37Q6PGP7 1564 aa12.15□□□□□ -0.46
PDGFRA-207ENST00000509092 FAM53CQ9NYF3 392 aa12.15□□□□□ -0.46
PDGFRA-207ENST00000509092 DDX19BQ9UMR2 479 aa12.15□□□□□ -0.46
PDGFRA-207ENST00000509092 IQSEC2Q5JU85 1478 aa12.15□□□□□ -0.46
PDGFRA-207ENST00000509092 SCAF11Q99590 1463 aaKnown RBP12.15□□□□□ -0.46
PDGFRA-207ENST00000509092 SMTNL1A8MU46 457 aa12.15□□□□□ -0.47
PDGFRA-207ENST00000509092 SOX12O15370 315 aa12.15□□□□□ -0.47
PDGFRA-207ENST00000509092 PSEN1P49768 467 aa12.15□□□□□ -0.47
PDGFRA-207ENST00000509092 GPATCH8Q9UKJ3 1502 aaKnown RBP12.14□□□□□ -0.47
PDGFRA-207ENST00000509092 CHD1LQ86WJ1 897 aa12.14□□□□□ -0.47
PDGFRA-207ENST00000509092 WDR63Q8IWG1 891 aa12.14□□□□□ -0.47
PDGFRA-207ENST00000509092 CLTCL1P53675 1640 aa12.14□□□□□ -0.47
PDGFRA-207ENST00000509092 CLGNO14967 610 aa12.13□□□□□ -0.47
PDGFRA-207ENST00000509092 LNPKQ9C0E8 428 aa12.13□□□□□ -0.47
PDGFRA-207ENST00000509092 PYCARDQ9ULZ3 195 aa12.13□□□□□ -0.47
PDGFRA-207ENST00000509092 SHPRHQ149N8 1683 aa12.13□□□□□ -0.47
PDGFRA-207ENST00000509092 A2MP01023 1474 aa12.13□□□□□ -0.47
PDGFRA-207ENST00000509092 HDAC5Q9UQL6 1122 aa12.13□□□□□ -0.47
PDGFRA-207ENST00000509092 KCNF1Q9H3M0 494 aa12.12□□□□□ -0.47
PDGFRA-207ENST00000509092 IQGAP1P46940 1657 aa12.12□□□□□ -0.47
PDGFRA-207ENST00000509092 CYP2C19P33261 490 aa12.12□□□□□ -0.47
PDGFRA-207ENST00000509092 AXDND1Q5T1B0 1012 aaPredicted RBP12.12□□□□□ -0.47
PDGFRA-207ENST00000509092 CDC42BPBQ9Y5S2 1711 aa12.12□□□□□ -0.47
PDGFRA-207ENST00000509092 TNNT3P45378 269 aaPredicted RBP12.11□□□□□ -0.47
PDGFRA-207ENST00000509092 RAD51AP2Q09MP3 1159 aa12.11□□□□□ -0.47
PDGFRA-207ENST00000509092 ZNF397Q8NF99 534 aaPredicted RBP12.11□□□□□ -0.47
PDGFRA-207ENST00000509092 ZBTB9Q96C00 473 aa12.11□□□□□ -0.47
PDGFRA-207ENST00000509092 HNRNPH2P55795 449 aaKnown RBP12.11□□□□□ -0.47
PDGFRA-207ENST00000509092 ZGPATQ8N5A5 531 aaKnown RBP12.11□□□□□ -0.47
PDGFRA-207ENST00000509092 CFDP1Q9UEE9 299 aaPredicted RBP12.11□□□□□ -0.47
PDGFRA-207ENST00000509092 PREX2Q70Z35 1606 aa12.1□□□□□ -0.47
PDGFRA-207ENST00000509092 ABCA9Q8IUA7 1624 aa12.1□□□□□ -0.47
PDGFRA-207ENST00000509092 KDM4AO75164 1064 aa12.1□□□□□ -0.47
PDGFRA-207ENST00000509092 CDC45O75419 566 aa12.1□□□□□ -0.47
PDGFRA-207ENST00000509092 ITPRIPQ8IWB1 547 aa12.1□□□□□ -0.47
PDGFRA-207ENST00000509092 DHX37Q8IY37 1157 aaKnown RBP12.1□□□□□ -0.47
PDGFRA-207ENST00000509092 NOP2P46087 812 aaKnown RBP12.1□□□□□ -0.47
PDGFRA-207ENST00000509092 CTR9Q6PD62 1173 aa12.1□□□□□ -0.47
PDGFRA-207ENST00000509092 TRERF1Q96PN7 1200 aa12.1□□□□□ -0.47
PDGFRA-207ENST00000509092 POLR3AO14802 1390 aaPredicted RBP12.1□□□□□ -0.47
PDGFRA-207ENST00000509092 CT47B1P0C2W7 299 aaPredicted RBP12.09□□□□□ -0.47
PDGFRA-207ENST00000509092 CHAMP1Q96JM3 812 aa12.09□□□□□ -0.47
PDGFRA-207ENST00000509092 SLC52A1Q9NWF4 448 aa12.09□□□□□ -0.47
PDGFRA-207ENST00000509092 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.09□□□□□ -0.47
PDGFRA-207ENST00000509092 GOLGA6L6A8MZA4 724 aa12.09□□□□□ -0.47
PDGFRA-207ENST00000509092 REC8O95072 547 aa12.09□□□□□ -0.47
PDGFRA-207ENST00000509092 CFAP44Q96MT7 982 aa12.09□□□□□ -0.47
PDGFRA-207ENST00000509092 ZBTB40Q9NUA8 1239 aa12.09□□□□□ -0.47
PDGFRA-207ENST00000509092 PAXBP1Q9Y5B6 917 aa12.09□□□□□ -0.47
PDGFRA-207ENST00000509092 ST18O60284 1047 aa12.08□□□□□ -0.48
PDGFRA-207ENST00000509092 TRIM27P14373 513 aa12.08□□□□□ -0.48
PDGFRA-207ENST00000509092 RUNDC1Q96C34 613 aa12.08□□□□□ -0.48
PDGFRA-207ENST00000509092 RASSF4Q9H2L5 321 aa12.08□□□□□ -0.48
PDGFRA-207ENST00000509092 RSPH14Q9UHP6 348 aa12.08□□□□□ -0.48
PDGFRA-207ENST00000509092 CCDC27Q2M243 656 aa12.08□□□□□ -0.48
PDGFRA-207ENST00000509092 NCBP3Q53F19 620 aaKnown RBP12.08□□□□□ -0.48
PDGFRA-207ENST00000509092 CHMP4CQ96CF2 233 aa12.08□□□□□ -0.48
PDGFRA-207ENST00000509092 KIF1BPQ96EK5 621 aa12.08□□□□□ -0.48
PDGFRA-207ENST00000509092 NOL10Q9BSC4 688 aaKnown RBP12.08□□□□□ -0.48
PDGFRA-207ENST00000509092 BCCIPQ9P287 314 aaKnown RBP eCLIP12.08□□□□□ -0.48
PDGFRA-207ENST00000509092 ZNF777Q9ULD5 760 aaPredicted RBP12.08□□□□□ -0.48
PDGFRA-207ENST00000509092 SHANK2Q9UPX8 1470 aa12.08□□□□□ -0.48
PDGFRA-207ENST00000509092 KDM5AP29375 1690 aaKnown RBP12.07□□□□□ -0.48
PDGFRA-207ENST00000509092 CEP152O94986 1710 aa12.07□□□□□ -0.48
PDGFRA-207ENST00000509092 KMT5BQ4FZB7 885 aa12.07□□□□□ -0.48
PDGFRA-207ENST00000509092 CCDC112Q8NEF3 446 aa12.07□□□□□ -0.48
PDGFRA-207ENST00000509092 ZNF622Q969S3 477 aaKnown RBP eCLIP12.07□□□□□ -0.48
PDGFRA-207ENST00000509092 PLCH2O75038 1416 aa12.07□□□□□ -0.48
PDGFRA-207ENST00000509092 PPRC1Q5VV67 1664 aaKnown RBP12.07□□□□□ -0.48
PDGFRA-207ENST00000509092 GTF2A1P52655 376 aaPredicted RBP12.07□□□□□ -0.48
PDGFRA-207ENST00000509092 ARHGAP5Q13017 1502 aa12.07□□□□□ -0.48
PDGFRA-207ENST00000509092 BRD1O95696 1058 aa12.06□□□□□ -0.48
PDGFRA-207ENST00000509092 APPP05067 770 aa12.06□□□□□ -0.48
PDGFRA-207ENST00000509092 NAA30Q147X3 362 aaPredicted RBP12.06□□□□□ -0.48
PDGFRA-207ENST00000509092 SLFNL1Q499Z3 407 aa12.06□□□□□ -0.48
PDGFRA-207ENST00000509092 MUM1L1Q5H9M0 696 aa12.06□□□□□ -0.48
PDGFRA-207ENST00000509092 CCDC183Q5T5S1 534 aa12.06□□□□□ -0.48
PDGFRA-207ENST00000509092 CFAP65Q6ZU64 1925 aaKnown RBP12.06□□□□□ -0.48
PDGFRA-207ENST00000509092 TCHHQ07283 1943 aa12.06□□□□□ -0.48
PDGFRA-207ENST00000509092 DHX16O60231 1041 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms