RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 KIF4AO95239 1232 aa4.93□□□□□ -1.62
NEDD4-209ENST00000508871 ZRSR2Q15696 482 aaKnown RBP4.93□□□□□ -1.62
NEDD4-209ENST00000508871 UHRF1BP1Q6BDS2 1440 aa4.93□□□□□ -1.62
NEDD4-209ENST00000508871 POGZQ7Z3K3 1410 aa4.93□□□□□ -1.62
NEDD4-209ENST00000508871 NLRP6P59044 892 aa4.92□□□□□ -1.62
NEDD4-209ENST00000508871 MCM6Q14566 821 aa4.92□□□□□ -1.62
NEDD4-209ENST00000508871 PPP2R5AQ15172 486 aa4.92□□□□□ -1.62
NEDD4-209ENST00000508871 GLYCTKQ8IVS8 523 aa4.92□□□□□ -1.62
NEDD4-209ENST00000508871 ADGRL1O94910 1474 aa4.92□□□□□ -1.62
NEDD4-209ENST00000508871 ZSCAN29Q8IWY8 852 aaPredicted RBP4.92□□□□□ -1.62
NEDD4-209ENST00000508871 GOLGA6L6A8MZA4 724 aa4.92□□□□□ -1.62
NEDD4-209ENST00000508871 PAK3O75914 559 aaPredicted RBP4.92□□□□□ -1.62
NEDD4-209ENST00000508871 SPTY2D1Q68D10 685 aaPredicted RBP4.92□□□□□ -1.62
NEDD4-209ENST00000508871 CCDC146Q8IYE0 955 aa4.92□□□□□ -1.62
NEDD4-209ENST00000508871 U3KPZ7 1027 aaPredicted RBP4.92□□□□□ -1.62
NEDD4-209ENST00000508871 BMS1Q14692 1282 aaKnown RBP4.92□□□□□ -1.62
NEDD4-209ENST00000508871 ZFYVE27Q5T4F4 411 aa4.92□□□□□ -1.62
NEDD4-209ENST00000508871 PPME1Q9Y570 386 aa4.92□□□□□ -1.62
NEDD4-209ENST00000508871 ANKRD30BQ9BXX2 1392 aa4.92□□□□□ -1.62
NEDD4-209ENST00000508871 KDM5AP29375 1690 aaKnown RBP4.92□□□□□ -1.62
NEDD4-209ENST00000508871 FAM193AP78312 1265 aa4.92□□□□□ -1.62
NEDD4-209ENST00000508871 MROH2AA6NES4 1674 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 STK10O94804 968 aaKnown RBP4.91□□□□□ -1.62
NEDD4-209ENST00000508871 FGD1P98174 961 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 VTI1BQ9UEU0 232 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 KIF15Q9NS87 1388 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 DIP2CQ9Y2E4 1556 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 CCDC181Q5TID7 509 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 UPF1Q92900 1129 aaKnown RBP eCLIP4.91□□□□□ -1.62
NEDD4-209ENST00000508871 EFCAB6Q5THR3 1501 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 MAPK1P28482 360 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 EFCAB2Q5VUJ9 269 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 SLC4A10Q6U841 1118 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 CREBRFQ8IUR6 639 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 MRFAP1L1Q96HT8 127 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 BEGAINQ9BUH8 593 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 PIK3C2BO00750 1634 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 APBB1IPQ7Z5R6 666 aaPredicted RBP4.91□□□□□ -1.62
NEDD4-209ENST00000508871 GOLGA6L1Q8N7Z2 621 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 CABP2Q9NPB3 220 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 USTQ9Y2C2 406 aa4.91□□□□□ -1.62
NEDD4-209ENST00000508871 HMGN5P82970 282 aaKnown RBP4.9□□□□□ -1.62
NEDD4-209ENST00000508871 ANP32BQ92688 251 aaKnown RBP4.9□□□□□ -1.62
NEDD4-209ENST00000508871 MINK1Q8N4C8 1332 aaPredicted RBP4.9□□□□□ -1.62
NEDD4-209ENST00000508871 RALGAPBQ86X10 1494 aa4.9□□□□□ -1.62
NEDD4-209ENST00000508871 ZBBXA8MT70 800 aa4.9□□□□□ -1.62
NEDD4-209ENST00000508871 PHF14O94880 888 aa4.9□□□□□ -1.62
NEDD4-209ENST00000508871 GIGYF2Q6Y7W6 1299 aaKnown RBP4.9□□□□□ -1.62
NEDD4-209ENST00000508871 MYO3AQ8NEV4 1616 aa4.9□□□□□ -1.63
NEDD4-209ENST00000508871 GOLGA6L22H0YM25 854 aa4.9□□□□□ -1.63
NEDD4-209ENST00000508871 TMEM87AQ8NBN3 555 aa4.9□□□□□ -1.63
NEDD4-209ENST00000508871 IQGAP1P46940 1657 aa4.9□□□□□ -1.63
NEDD4-209ENST00000508871 AGLP35573 1532 aa4.9□□□□□ -1.63
NEDD4-209ENST00000508871 ARHGEF40Q8TER5 1519 aa4.9□□□□□ -1.63
NEDD4-209ENST00000508871 CLCN1P35523 988 aa4.9□□□□□ -1.63
NEDD4-209ENST00000508871 WDR43Q15061 677 aaKnown RBP eCLIP4.9□□□□□ -1.63
NEDD4-209ENST00000508871 PPLO60437 1756 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 SLC4A8Q2Y0W8 1093 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 MADDQ8WXG6 1647 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 DPYSL4O14531 572 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 RAB11FIP3O75154 756 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 ATP2B2Q01814 1243 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 MKRN4PQ13434 485 aaPredicted RBP4.89□□□□□ -1.63
NEDD4-209ENST00000508871 PDAP1Q13442 181 aaKnown RBP4.89□□□□□ -1.63
NEDD4-209ENST00000508871 PNMA2Q9UL42 364 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 TONSLQ96HA7 1378 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 PTPRTO14522 1441 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 TSPY4P0CV99 314 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 TSPY10P0CW01 314 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 MEX3CQ5U5Q3 659 aaKnown RBP4.89□□□□□ -1.63
NEDD4-209ENST00000508871 CADPS2Q86UW7 1296 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 SPINK5Q9NQ38 1064 aaPredicted RBP4.89□□□□□ -1.63
NEDD4-209ENST00000508871 CLTCL1P53675 1640 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 PRR29P0C7W0 189 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 MAPK8P45983 427 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 CPLX3Q8WVH0 158 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 TRIM55Q9BYV6 548 aa4.89□□□□□ -1.63
NEDD4-209ENST00000508871 FYB1O15117 783 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 LARP1Q6PKG0 1096 aaKnown RBP4.88□□□□□ -1.63
NEDD4-209ENST00000508871 CD109Q6YHK3 1445 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 MPHOSPH9Q99550 1183 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 TRAPPC8Q9Y2L5 1435 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 LOC102724159A0A0B4J2E5 919 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 PWP2Q15269 919 aaKnown RBP4.88□□□□□ -1.63
NEDD4-209ENST00000508871 CASC1Q6TDU7 716 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 RNF25Q96BH1 459 aaPredicted RBP4.88□□□□□ -1.63
NEDD4-209ENST00000508871 MYOM2P54296 1465 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 CCDC34Q96HJ3 373 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 ANO2Q9NQ90 1003 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 SETBP1Q9Y6X0 1596 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 STAC3Q96MF2 364 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 RIPOR2Q9Y4F9 1068 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 KANK1Q14678 1352 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 SPDYE2BA6NHP3 402 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 SPDYE6P0CI01 402 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 MLLT3P42568 568 aaPredicted RBP4.88□□□□□ -1.63
NEDD4-209ENST00000508871 SPDYE2Q495Y8 402 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 FILIP1Q7Z7B0 1213 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 PARP9Q8IXQ6 854 aa4.88□□□□□ -1.63
NEDD4-209ENST00000508871 DHX38Q92620 1227 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms