RNA–Protein interactions for RNA: ENST00000508828.1

SPSB4-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 3

Gene SPSB4, Length 537 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-204ENST00000508828 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
SPSB4-204ENST00000508828 SLIT3O75094 1523 aa17.32■□□□□ 0.36
SPSB4-204ENST00000508828 NFAT5O94916 1531 aa17.32■□□□□ 0.36
SPSB4-204ENST00000508828 RNF123Q5XPI4 1314 aa17.32■□□□□ 0.36
SPSB4-204ENST00000508828 PRKAR2BP31323 418 aa17.32■□□□□ 0.36
SPSB4-204ENST00000508828 EIF4A2Q14240 407 aaKnown RBP17.32■□□□□ 0.36
SPSB4-204ENST00000508828 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
SPSB4-204ENST00000508828 DUSP27Q5VZP5 1158 aa17.32■□□□□ 0.36
SPSB4-204ENST00000508828 NUTM2GQ5VZR2 741 aa17.32■□□□□ 0.36
SPSB4-204ENST00000508828 ERICH6BQ5W0A0 696 aa17.32■□□□□ 0.36
SPSB4-204ENST00000508828 WDR63Q8IWG1 891 aa17.32■□□□□ 0.36
SPSB4-204ENST00000508828 KCNH5Q8NCM2 988 aa17.32■□□□□ 0.36
SPSB4-204ENST00000508828 RGPD1P0DJD0 1748 aa17.32■□□□□ 0.36
SPSB4-204ENST00000508828 ARHGEF10O15013 1369 aa17.31■□□□□ 0.36
SPSB4-204ENST00000508828 TMPOP42166 694 aaKnown RBP17.31■□□□□ 0.36
SPSB4-204ENST00000508828 ALS2Q96Q42 1657 aa17.31■□□□□ 0.36
SPSB4-204ENST00000508828 LTN1O94822 1766 aa17.3■□□□□ 0.36
SPSB4-204ENST00000508828 NPHP3Q7Z494 1330 aa17.3■□□□□ 0.36
SPSB4-204ENST00000508828 TRMT2AQ8IZ69 625 aaKnown RBP17.3■□□□□ 0.36
SPSB4-204ENST00000508828 PHRF1Q9P1Y6 1649 aaKnown RBP17.29■□□□□ 0.36
SPSB4-204ENST00000508828 HMOX1P09601 288 aa17.29■□□□□ 0.36
SPSB4-204ENST00000508828 HSP90AB2PQ58FF8 381 aa17.29■□□□□ 0.36
SPSB4-204ENST00000508828 USP19O94966 1318 aa17.28■□□□□ 0.36
SPSB4-204ENST00000508828 TOM1O60784 492 aa17.28■□□□□ 0.36
SPSB4-204ENST00000508828 XPCQ01831 940 aaPredicted RBP17.28■□□□□ 0.36
SPSB4-204ENST00000508828 HOXC9P31274 260 aa17.27■□□□□ 0.36
SPSB4-204ENST00000508828 NFE2L2Q16236 605 aa17.27■□□□□ 0.36
SPSB4-204ENST00000508828 RRP1P56182 461 aaKnown RBP17.26■□□□□ 0.35
SPSB4-204ENST00000508828 RIPK4P57078 832 aa17.26■□□□□ 0.35
SPSB4-204ENST00000508828 MYH16Q9H6N6 1097 aa17.26■□□□□ 0.35
SPSB4-204ENST00000508828 TNS3Q68CZ2 1445 aa17.26■□□□□ 0.35
SPSB4-204ENST00000508828 LMOD3Q0VAK6 560 aa17.25■□□□□ 0.35
SPSB4-204ENST00000508828 SULT6B1Q6IMI4 303 aa17.25■□□□□ 0.35
SPSB4-204ENST00000508828 LMOD2Q6P5Q4 547 aa17.25■□□□□ 0.35
SPSB4-204ENST00000508828 PXDNQ92626 1479 aa17.24■□□□□ 0.35
SPSB4-204ENST00000508828 IL16Q14005 1332 aa17.24■□□□□ 0.35
SPSB4-204ENST00000508828 IRX6P78412 446 aaPredicted RBP17.24■□□□□ 0.35
SPSB4-204ENST00000508828 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
SPSB4-204ENST00000508828 IGSF1Q8N6C5 1336 aa17.23■□□□□ 0.35
SPSB4-204ENST00000508828 IP6K1Q92551 441 aa17.23■□□□□ 0.35
SPSB4-204ENST00000508828 TRIM35Q9UPQ4 493 aa17.23■□□□□ 0.35
SPSB4-204ENST00000508828 CALD1Q05682 793 aaKnown RBP17.22■□□□□ 0.35
SPSB4-204ENST00000508828 BRINP3Q76B58 766 aa17.22■□□□□ 0.35
SPSB4-204ENST00000508828 KDRP35968 1356 aa17.22■□□□□ 0.35
SPSB4-204ENST00000508828 MED1Q15648 1581 aaPredicted RBP17.22■□□□□ 0.35
SPSB4-204ENST00000508828 GCP02774 474 aa17.21■□□□□ 0.35
SPSB4-204ENST00000508828 AEBP1Q8IUX7 1158 aa17.21■□□□□ 0.35
SPSB4-204ENST00000508828 PHACTR3Q96KR7 559 aa17.21■□□□□ 0.35
SPSB4-204ENST00000508828 SLAIN2Q9P270 581 aa17.21■□□□□ 0.35
SPSB4-204ENST00000508828 DLG5Q8TDM6 1919 aa17.2■□□□□ 0.34
SPSB4-204ENST00000508828 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.2■□□□□ 0.34
SPSB4-204ENST00000508828 SPATA31A3Q5VYP0 1347 aa17.2■□□□□ 0.34
SPSB4-204ENST00000508828 ZBTB7CA1YPR0 619 aa17.19■□□□□ 0.34
SPSB4-204ENST00000508828 PIP4K2BP78356 416 aa17.19■□□□□ 0.34
SPSB4-204ENST00000508828 ARHGEF25Q86VW2 580 aa17.19■□□□□ 0.34
SPSB4-204ENST00000508828 EYA1Q99502 592 aa17.19■□□□□ 0.34
SPSB4-204ENST00000508828 ABCC6O95255 1503 aa17.18■□□□□ 0.34
SPSB4-204ENST00000508828 DDX17Q92841 729 aaKnown RBP17.18■□□□□ 0.34
SPSB4-204ENST00000508828 CRYBG1Q9Y4K1 1723 aa17.18■□□□□ 0.34
SPSB4-204ENST00000508828 NHSL1Q5SYE7 1610 aa17.18■□□□□ 0.34
SPSB4-204ENST00000508828 PPP4R2Q9NY27 417 aa17.17■□□□□ 0.34
SPSB4-204ENST00000508828 CT47B1P0C2W7 299 aaPredicted RBP17.16■□□□□ 0.34
SPSB4-204ENST00000508828 LTV1Q96GA3 475 aaPredicted RBP17.16■□□□□ 0.34
SPSB4-204ENST00000508828 SOS2Q07890 1332 aaPredicted RBP17.16■□□□□ 0.34
SPSB4-204ENST00000508828 FANCIQ9NVI1 1328 aa17.16■□□□□ 0.34
SPSB4-204ENST00000508828 PELP1Q8IZL8 1130 aaKnown RBP17.15■□□□□ 0.34
SPSB4-204ENST00000508828 GAS2L2Q8NHY3 880 aa17.15■□□□□ 0.34
SPSB4-204ENST00000508828 PLEKHG5O94827 1062 aa17.14■□□□□ 0.33
SPSB4-204ENST00000508828 CAMTA1Q9Y6Y1 1673 aa17.13■□□□□ 0.33
SPSB4-204ENST00000508828 GNAI1P63096 354 aa17.13■□□□□ 0.33
SPSB4-204ENST00000508828 IFT57Q9NWB7 429 aa17.13■□□□□ 0.33
SPSB4-204ENST00000508828 HSPA1LP34931 641 aa17.12■□□□□ 0.33
SPSB4-204ENST00000508828 ANKRD24Q8TF21 1146 aa17.11■□□□□ 0.33
SPSB4-204ENST00000508828 TSR2Q969E8 191 aaKnown RBP17.11■□□□□ 0.33
SPSB4-204ENST00000508828 CPDO75976 1380 aa17.11■□□□□ 0.33
SPSB4-204ENST00000508828 NCAPD2Q15021 1401 aa17.11■□□□□ 0.33
SPSB4-204ENST00000508828 FAM208AQ9UK61 1670 aaKnown RBP17.1■□□□□ 0.33
SPSB4-204ENST00000508828 ZC3H6P61129 1189 aaKnown RBP17.1■□□□□ 0.33
SPSB4-204ENST00000508828 RGPD2P0DJD1 1756 aa17.1■□□□□ 0.33
SPSB4-204ENST00000508828 COL18A1P39060 1754 aa17.1■□□□□ 0.33
SPSB4-204ENST00000508828 EXOSC9Q06265 439 aaKnown RBP17.09■□□□□ 0.33
SPSB4-204ENST00000508828 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
SPSB4-204ENST00000508828 RTF1Q92541 710 aaKnown RBP17.09■□□□□ 0.33
SPSB4-204ENST00000508828 ABCA3Q99758 1704 aa17.09■□□□□ 0.33
SPSB4-204ENST00000508828 RGPD5Q99666 1765 aa17.08■□□□□ 0.33
SPSB4-204ENST00000508828 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.32
SPSB4-204ENST00000508828 PLIN1O60240 522 aa17.08■□□□□ 0.32
SPSB4-204ENST00000508828 RARSP54136 660 aaKnown RBP17.08■□□□□ 0.32
SPSB4-204ENST00000508828 THUMPD2Q9BTF0 503 aaKnown RBP17.08■□□□□ 0.32
SPSB4-204ENST00000508828 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.32
SPSB4-204ENST00000508828 LMO7Q8WWI1 1683 aa17.07■□□□□ 0.32
SPSB4-204ENST00000508828 ROBO1Q9Y6N7 1651 aa17.07■□□□□ 0.32
SPSB4-204ENST00000508828 AHDC1Q5TGY3 1603 aaPredicted RBP17.07■□□□□ 0.32
SPSB4-204ENST00000508828 ZNF853P0CG23 659 aa17.07■□□□□ 0.32
SPSB4-204ENST00000508828 CANXP27824 592 aaKnown RBP17.07■□□□□ 0.32
SPSB4-204ENST00000508828 NBPF6Q5VWK0 638 aa17.07■□□□□ 0.32
SPSB4-204ENST00000508828 USHBP1Q8N6Y0 703 aa17.07■□□□□ 0.32
SPSB4-204ENST00000508828 NBPF4Q96M43 638 aa17.07■□□□□ 0.32
SPSB4-204ENST00000508828 CFAP44Q96MT7 982 aa17.07■□□□□ 0.32
SPSB4-204ENST00000508828 LRRC37A3O60309 1634 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms