RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 SULT6B1Q6IMI4 303 aa15.82■□□□□ 0.12
LIN54-206ENST00000506560 CLUAP1Q96AJ1 413 aa15.81■□□□□ 0.12
LIN54-206ENST00000506560 PLEKHG5O94827 1062 aa15.81■□□□□ 0.12
LIN54-206ENST00000506560 NFE2L2Q16236 605 aa15.81■□□□□ 0.12
LIN54-206ENST00000506560 TTC21AQ8NDW8 1320 aa15.81■□□□□ 0.12
LIN54-206ENST00000506560 CANXP27824 592 aaKnown RBP15.81■□□□□ 0.12
LIN54-206ENST00000506560 XPCQ01831 940 aaPredicted RBP15.81■□□□□ 0.12
LIN54-206ENST00000506560 C14orf37Q86TY3 774 aa15.81■□□□□ 0.12
LIN54-206ENST00000506560 ANKARQ7Z5J8 1434 aa15.8■□□□□ 0.12
LIN54-206ENST00000506560 NCBP3Q53F19 620 aaKnown RBP15.8■□□□□ 0.12
LIN54-206ENST00000506560 DLG5Q8TDM6 1919 aa15.8■□□□□ 0.12
LIN54-206ENST00000506560 HSPA2P54652 639 aa15.8■□□□□ 0.12
LIN54-206ENST00000506560 PHF8Q9UPP1 1060 aa15.8■□□□□ 0.12
LIN54-206ENST00000506560 ESCO1Q5FWF5 840 aa15.79■□□□□ 0.12
LIN54-206ENST00000506560 ORAI2Q96SN7 254 aa15.79■□□□□ 0.12
LIN54-206ENST00000506560 ABTB2Q8N961 1025 aa15.79■□□□□ 0.12
LIN54-206ENST00000506560 PNNQ9H307 717 aaKnown RBP15.78■□□□□ 0.12
LIN54-206ENST00000506560 ADGRL3Q9HAR2 1447 aa15.78■□□□□ 0.12
LIN54-206ENST00000506560 MARF1Q9Y4F3 1742 aaKnown RBP15.78■□□□□ 0.12
LIN54-206ENST00000506560 SSH1Q8WYL5 1049 aa15.77■□□□□ 0.12
LIN54-206ENST00000506560 ANP32EQ9BTT0 268 aa15.77■□□□□ 0.12
LIN54-206ENST00000506560 NEFMP07197 916 aa15.77■□□□□ 0.11
LIN54-206ENST00000506560 KDM2BQ8NHM5 1336 aa15.77■□□□□ 0.11
LIN54-206ENST00000506560 ELL2O00472 640 aaPredicted RBP15.75■□□□□ 0.11
LIN54-206ENST00000506560 TSPYL6Q8N831 410 aa15.75■□□□□ 0.11
LIN54-206ENST00000506560 FOXO3O43524 673 aa15.75■□□□□ 0.11
LIN54-206ENST00000506560 AMPHP49418 695 aa15.75■□□□□ 0.11
LIN54-206ENST00000506560 IL16Q14005 1332 aa15.75■□□□□ 0.11
LIN54-206ENST00000506560 PDE3AQ14432 1141 aa15.75■□□□□ 0.11
LIN54-206ENST00000506560 SMC4Q9NTJ3 1288 aa15.75■□□□□ 0.11
LIN54-206ENST00000506560 TCERG1O14776 1098 aaKnown RBP15.74■□□□□ 0.11
LIN54-206ENST00000506560 PROSER2Q86WR7 435 aaPredicted RBP15.74■□□□□ 0.11
LIN54-206ENST00000506560 LTV1Q96GA3 475 aaPredicted RBP15.74■□□□□ 0.11
LIN54-206ENST00000506560 IGHDP01880 384 aa15.74■□□□□ 0.11
LIN54-206ENST00000506560 RGPD1P0DJD0 1748 aa15.73■□□□□ 0.11
LIN54-206ENST00000506560 EYA1Q99502 592 aa15.73■□□□□ 0.11
LIN54-206ENST00000506560 MBIPQ9NS73 344 aa15.73■□□□□ 0.11
LIN54-206ENST00000506560 SBNO1A3KN83 1393 aa15.73■□□□□ 0.11
LIN54-206ENST00000506560 FLT4P35916 1363 aa15.73■□□□□ 0.11
LIN54-206ENST00000506560 MCM10Q7L590 875 aa15.73■□□□□ 0.11
LIN54-206ENST00000506560 PSME1Q06323 249 aa15.72■□□□□ 0.11
LIN54-206ENST00000506560 HOXC9P31274 260 aa15.71■□□□□ 0.11
LIN54-206ENST00000506560 ZBTB7CA1YPR0 619 aa15.71■□□□□ 0.11
LIN54-206ENST00000506560 TRIM27P14373 513 aa15.71■□□□□ 0.11
LIN54-206ENST00000506560 KRT24Q2M2I5 525 aa15.71■□□□□ 0.11
LIN54-206ENST00000506560 ZNF853P0CG23 659 aa15.7■□□□□ 0.1
LIN54-206ENST00000506560 DDX17Q92841 729 aaKnown RBP15.7■□□□□ 0.1
LIN54-206ENST00000506560 NOB1Q9ULX3 412 aaKnown RBP15.7■□□□□ 0.1
LIN54-206ENST00000506560 USHBP1Q8N6Y0 703 aa15.7■□□□□ 0.1
LIN54-206ENST00000506560 STRCP1A6NGW2 1772 aa15.7■□□□□ 0.1
LIN54-206ENST00000506560 C8orf58Q8NAV2 365 aa15.7■□□□□ 0.1
LIN54-206ENST00000506560 PCDHB15Q9Y5E8 787 aa15.69■□□□□ 0.1
LIN54-206ENST00000506560 NWD1Q149M9 1564 aa15.69■□□□□ 0.1
LIN54-206ENST00000506560 MTHFSDQ2M296 383 aaKnown RBP15.69■□□□□ 0.1
LIN54-206ENST00000506560 ZKSCAN2Q63HK3 967 aa15.69■□□□□ 0.1
LIN54-206ENST00000506560 LMOD2Q6P5Q4 547 aa15.69■□□□□ 0.1
LIN54-206ENST00000506560 VAMP4O75379 141 aa15.68■□□□□ 0.1
LIN54-206ENST00000506560 CENPQQ7L2Z9 268 aaPredicted RBP15.68■□□□□ 0.1
LIN54-206ENST00000506560 IFT57Q9NWB7 429 aa15.68■□□□□ 0.1
LIN54-206ENST00000506560 MIS18AQ9NYP9 233 aa15.68■□□□□ 0.1
LIN54-206ENST00000506560 IGSF1Q8N6C5 1336 aa15.67■□□□□ 0.1
LIN54-206ENST00000506560 MSH5O43196 834 aa15.67■□□□□ 0.1
LIN54-206ENST00000506560 CT47B1P0C2W7 299 aaPredicted RBP15.67■□□□□ 0.1
LIN54-206ENST00000506560 GNAI1P63096 354 aa15.67■□□□□ 0.1
LIN54-206ENST00000506560 CFAP44Q96MT7 982 aa15.67■□□□□ 0.1
LIN54-206ENST00000506560 KDM4FA0A1W2PPD8 638 aa15.66■□□□□ 0.1
LIN54-206ENST00000506560 DZIP1LQ8IYY4 767 aaKnown RBP15.66■□□□□ 0.1
LIN54-206ENST00000506560 ARHGEF10O15013 1369 aa15.66■□□□□ 0.1
LIN54-206ENST00000506560 FTSJ3Q8IY81 847 aaKnown RBP15.66■□□□□ 0.1
LIN54-206ENST00000506560 TMEM94Q12767 1356 aa15.66■□□□□ 0.1
LIN54-206ENST00000506560 RGS3P49796 1198 aa15.65■□□□□ 0.1
LIN54-206ENST00000506560 MVPQ14764 893 aaKnown RBP15.65■□□□□ 0.1
LIN54-206ENST00000506560 LTN1O94822 1766 aa15.65■□□□□ 0.1
LIN54-206ENST00000506560 ATF7IPQ6VMQ6 1270 aa15.65■□□□□ 0.1
LIN54-206ENST00000506560 KDRP35968 1356 aa15.65■□□□□ 0.1
LIN54-206ENST00000506560 TMEM57Q8N5G2 664 aa15.64■□□□□ 0.09
LIN54-206ENST00000506560 C1orf167Q5SNV9 1468 aa15.64■□□□□ 0.09
LIN54-206ENST00000506560 LMOD3Q0VAK6 560 aa15.64■□□□□ 0.09
LIN54-206ENST00000506560 NFAT5O94916 1531 aa15.64■□□□□ 0.09
LIN54-206ENST00000506560 USP54Q70EL1 1684 aa15.64■□□□□ 0.09
LIN54-206ENST00000506560 TWISTNBQ3B726 338 aaPredicted RBP15.64■□□□□ 0.09
LIN54-206ENST00000506560 C19orf44Q9H6X5 657 aa15.64■□□□□ 0.09
LIN54-206ENST00000506560 ITPRIPQ8IWB1 547 aa15.63■□□□□ 0.09
LIN54-206ENST00000506560 PDE4AP27815 886 aa15.63■□□□□ 0.09
LIN54-206ENST00000506560 LRRC59Q96AG4 307 aaKnown RBP15.63■□□□□ 0.09
LIN54-206ENST00000506560 CALD1Q05682 793 aaKnown RBP15.62■□□□□ 0.09
LIN54-206ENST00000506560 NBPF6Q5VWK0 638 aa15.62■□□□□ 0.09
LIN54-206ENST00000506560 KRT28Q7Z3Y7 464 aa15.62■□□□□ 0.09
LIN54-206ENST00000506560 MRPL50Q8N5N7 158 aaKnown RBP15.62■□□□□ 0.09
LIN54-206ENST00000506560 NBPF4Q96M43 638 aa15.62■□□□□ 0.09
LIN54-206ENST00000506560 CRB1P82279 1406 aa15.61■□□□□ 0.09
LIN54-206ENST00000506560 GCP02774 474 aa15.61■□□□□ 0.09
LIN54-206ENST00000506560 RGPD2P0DJD1 1756 aa15.61■□□□□ 0.09
LIN54-206ENST00000506560 CHL1O00533 1208 aa15.6■□□□□ 0.09
LIN54-206ENST00000506560 ALDH1L2Q3SY69 923 aa15.6■□□□□ 0.09
LIN54-206ENST00000506560 IP6K1Q92551 441 aa15.6■□□□□ 0.09
LIN54-206ENST00000506560 BACH2Q9BYV9 841 aa15.59■□□□□ 0.09
LIN54-206ENST00000506560 MST1RQ04912 1400 aa15.59■□□□□ 0.09
LIN54-206ENST00000506560 AXIN2Q9Y2T1 843 aa15.58■□□□□ 0.09
LIN54-206ENST00000506560 KIF16BQ96L93 1317 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms