RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 GCP02774 474 aa11.43□□□□□ -0.58
CDC42SE2-208ENST00000505065 ILDR1Q86SU0 546 aaPredicted RBP11.43□□□□□ -0.58
CDC42SE2-208ENST00000505065 FLT4P35916 1363 aa11.43□□□□□ -0.58
CDC42SE2-208ENST00000505065 KIAA0232Q92628 1395 aa11.42□□□□□ -0.58
CDC42SE2-208ENST00000505065 PIP4K2BP78356 416 aa11.42□□□□□ -0.58
CDC42SE2-208ENST00000505065 MRC1P22897 1456 aa11.42□□□□□ -0.58
CDC42SE2-208ENST00000505065 LY75O60449 1722 aa11.41□□□□□ -0.58
CDC42SE2-208ENST00000505065 POLKQ9UBT6 870 aa11.41□□□□□ -0.58
CDC42SE2-208ENST00000505065 KDM3BQ7LBC6 1761 aa11.4□□□□□ -0.58
CDC42SE2-208ENST00000505065 ABTB2Q8N961 1025 aa11.4□□□□□ -0.58
CDC42SE2-208ENST00000505065 CRB1P82279 1406 aa11.4□□□□□ -0.58
CDC42SE2-208ENST00000505065 RREB1Q92766 1687 aa11.4□□□□□ -0.58
CDC42SE2-208ENST00000505065 ONECUT3O60422 494 aaPredicted RBP11.4□□□□□ -0.58
CDC42SE2-208ENST00000505065 RALBP1Q15311 655 aa11.4□□□□□ -0.58
CDC42SE2-208ENST00000505065 TMC1Q8TDI8 760 aa11.4□□□□□ -0.58
CDC42SE2-208ENST00000505065 MAP3K19Q56UN5 1328 aa11.4□□□□□ -0.58
CDC42SE2-208ENST00000505065 QSER1Q2KHR3 1735 aa11.4□□□□□ -0.58
CDC42SE2-208ENST00000505065 XPCQ01831 940 aaPredicted RBP11.4□□□□□ -0.58
CDC42SE2-208ENST00000505065 IP6K1Q92551 441 aa11.4□□□□□ -0.58
CDC42SE2-208ENST00000505065 RGS17Q9UGC6 210 aaPredicted RBP11.39□□□□□ -0.59
CDC42SE2-208ENST00000505065 DOT1LQ8TEK3 1739 aa11.39□□□□□ -0.59
CDC42SE2-208ENST00000505065 FAM83GA6ND36 823 aa11.39□□□□□ -0.59
CDC42SE2-208ENST00000505065 COG3Q96JB2 828 aa11.38□□□□□ -0.59
CDC42SE2-208ENST00000505065 PRKRIP1Q9H875 184 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE2-208ENST00000505065 HOXC9P31274 260 aa11.38□□□□□ -0.59
CDC42SE2-208ENST00000505065 KNSTRNQ9Y448 316 aa11.38□□□□□ -0.59
CDC42SE2-208ENST00000505065 OVOS2A0A0G2JMS6 1433 aa11.38□□□□□ -0.59
CDC42SE2-208ENST00000505065 COL24A1Q17RW2 1714 aa11.38□□□□□ -0.59
CDC42SE2-208ENST00000505065 ERBB3P21860 1342 aa11.37□□□□□ -0.59
CDC42SE2-208ENST00000505065 IGSF1Q8N6C5 1336 aa11.37□□□□□ -0.59
CDC42SE2-208ENST00000505065 AXIN2Q9Y2T1 843 aa11.37□□□□□ -0.59
CDC42SE2-208ENST00000505065 PPP2R1AP30153 589 aa11.37□□□□□ -0.59
CDC42SE2-208ENST00000505065 NLRP6P59044 892 aa11.37□□□□□ -0.59
CDC42SE2-208ENST00000505065 GGNBP2Q9H3C7 697 aa11.37□□□□□ -0.59
CDC42SE2-208ENST00000505065 MYBBP1AQ9BQG0 1328 aaKnown RBP11.36□□□□□ -0.59
CDC42SE2-208ENST00000505065 WDR17Q8IZU2 1322 aa11.36□□□□□ -0.59
CDC42SE2-208ENST00000505065 COL5A3P25940 1745 aaPredicted RBP11.36□□□□□ -0.59
CDC42SE2-208ENST00000505065 VPS72Q15906 364 aa11.35□□□□□ -0.59
CDC42SE2-208ENST00000505065 TNS2Q63HR2 1409 aa11.35□□□□□ -0.59
CDC42SE2-208ENST00000505065 SPATA31A5Q5VU36 1347 aa11.35□□□□□ -0.59
CDC42SE2-208ENST00000505065 SPATA31A7Q8IWB4 1347 aa11.35□□□□□ -0.59
CDC42SE2-208ENST00000505065 MEGF6O75095 1541 aa11.35□□□□□ -0.59
CDC42SE2-208ENST00000505065 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDC42SE2-208ENST00000505065 IL13P35225 146 aa11.35□□□□□ -0.59
CDC42SE2-208ENST00000505065 TAF1LQ8IZX4 1826 aa11.34□□□□□ -0.59
CDC42SE2-208ENST00000505065 BARGINQ6ZT62 677 aa11.34□□□□□ -0.59
CDC42SE2-208ENST00000505065 SPATA31A1Q5TZJ5 1347 aa11.34□□□□□ -0.59
CDC42SE2-208ENST00000505065 DDX10Q13206 875 aaKnown RBP11.33□□□□□ -0.6
CDC42SE2-208ENST00000505065 THRAP3Q9Y2W1 955 aaKnown RBP11.33□□□□□ -0.6
CDC42SE2-208ENST00000505065 LAMB4A4D0S4 1761 aa11.33□□□□□ -0.6
CDC42SE2-208ENST00000505065 CABLES1Q8TDN4 633 aa11.33□□□□□ -0.6
CDC42SE2-208ENST00000505065 RGS12O14924 1447 aa11.33□□□□□ -0.6
CDC42SE2-208ENST00000505065 BTAF1O14981 1849 aa11.33□□□□□ -0.6
CDC42SE2-208ENST00000505065 NCBP3Q53F19 620 aaKnown RBP11.32□□□□□ -0.6
CDC42SE2-208ENST00000505065 UNC5CLQ8IV45 518 aa11.32□□□□□ -0.6
CDC42SE2-208ENST00000505065 CARD10Q9BWT7 1032 aa11.31□□□□□ -0.6
CDC42SE2-208ENST00000505065 TJP1Q07157 1748 aa11.31□□□□□ -0.6
CDC42SE2-208ENST00000505065 EMILIN1Q9Y6C2 1016 aa11.31□□□□□ -0.6
CDC42SE2-208ENST00000505065 NUP188Q5SRE5 1749 aa11.3□□□□□ -0.6
CDC42SE2-208ENST00000505065 PAK3O75914 559 aaPredicted RBP11.3□□□□□ -0.6
CDC42SE2-208ENST00000505065 MORC1Q86VD1 984 aa11.3□□□□□ -0.6
CDC42SE2-208ENST00000505065 EIF4A2Q14240 407 aaKnown RBP11.3□□□□□ -0.6
CDC42SE2-208ENST00000505065 C5P01031 1676 aa11.29□□□□□ -0.6
CDC42SE2-208ENST00000505065 AFF2P51816 1311 aa11.29□□□□□ -0.6
CDC42SE2-208ENST00000505065 CCER2I3L3R5 266 aa11.29□□□□□ -0.6
CDC42SE2-208ENST00000505065 PLEKHF1Q96S99 279 aa11.29□□□□□ -0.6
CDC42SE2-208ENST00000505065 TUBGCP6Q96RT7 1819 aa11.28□□□□□ -0.6
CDC42SE2-208ENST00000505065 N4BP2Q86UW6 1770 aaPredicted RBP11.28□□□□□ -0.6
CDC42SE2-208ENST00000505065 FBLN1P23142 703 aa11.28□□□□□ -0.6
CDC42SE2-208ENST00000505065 RRS1Q15050 365 aaKnown RBP11.28□□□□□ -0.6
CDC42SE2-208ENST00000505065 NUTM2GQ5VZR2 741 aa11.28□□□□□ -0.6
CDC42SE2-208ENST00000505065 MTHFSP49914 203 aa11.27□□□□□ -0.61
CDC42SE2-208ENST00000505065 HSP90AB2PQ58FF8 381 aa11.27□□□□□ -0.61
CDC42SE2-208ENST00000505065 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.612e-9■□□□□ 9.4
CDC42SE2-208ENST00000505065 CC2D1BQ5T0F9 858 aaKnown RBP11.26□□□□□ -0.61
CDC42SE2-208ENST00000505065 ZNF772Q68DY9 489 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE2-208ENST00000505065 ANKRD24Q8TF21 1146 aa11.26□□□□□ -0.61
CDC42SE2-208ENST00000505065 PHF23Q9BUL5 403 aaPredicted RBP11.25□□□□□ -0.61
CDC42SE2-208ENST00000505065 RSPH6AQ9H0K4 717 aa11.25□□□□□ -0.61
CDC42SE2-208ENST00000505065 BTG4Q9NY30 223 aa11.25□□□□□ -0.61
CDC42SE2-208ENST00000505065 NKX1-1Q15270 411 aaPredicted RBP11.24□□□□□ -0.61
CDC42SE2-208ENST00000505065 NBPF6Q5VWK0 638 aa11.24□□□□□ -0.61
CDC42SE2-208ENST00000505065 NBPF4Q96M43 638 aa11.24□□□□□ -0.61
CDC42SE2-208ENST00000505065 EYA1Q99502 592 aa11.24□□□□□ -0.61
CDC42SE2-208ENST00000505065 PRDM11Q9NQV5 511 aa11.24□□□□□ -0.61
CDC42SE2-208ENST00000505065 LARP1Q6PKG0 1096 aaKnown RBP11.24□□□□□ -0.61
CDC42SE2-208ENST00000505065 PNISRQ8TF01 805 aaKnown RBP11.24□□□□□ -0.61
CDC42SE2-208ENST00000505065 GJD4Q96KN9 370 aaPredicted RBP11.24□□□□□ -0.61
CDC42SE2-208ENST00000505065 CDCA7Q9BWT1 371 aaPredicted RBP11.24□□□□□ -0.61
CDC42SE2-208ENST00000505065 TRPC5Q9UL62 973 aaPredicted RBP11.24□□□□□ -0.61
CDC42SE2-208ENST00000505065 KCPQ6ZWJ8 1503 aa11.23□□□□□ -0.61
CDC42SE2-208ENST00000505065 ZC3H6P61129 1189 aaKnown RBP11.23□□□□□ -0.61
CDC42SE2-208ENST00000505065 CEMIPQ8WUJ3 1361 aa11.23□□□□□ -0.61
CDC42SE2-208ENST00000505065 KDM6AO15550 1401 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE2-208ENST00000505065 USP21Q9UK80 565 aa11.23□□□□□ -0.61
CDC42SE2-208ENST00000505065 CHRNA2Q15822 529 aa11.22□□□□□ -0.61
CDC42SE2-208ENST00000505065 CCDC184Q52MB2 194 aa11.22□□□□□ -0.61
CDC42SE2-208ENST00000505065 POTEAQ6S8J7 498 aa11.22□□□□□ -0.61
CDC42SE2-208ENST00000505065 BCORQ6W2J9 1755 aa11.21□□□□□ -0.61
CDC42SE2-208ENST00000505065 CASZ1Q86V15 1759 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms