RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 NLRP6P59044 892 aa6.81□□□□□ -1.32
LMNB1-208ENST00000504788 NUTM2GQ5VZR2 741 aa6.81□□□□□ -1.32
LMNB1-208ENST00000504788 SPATA31A6Q5VVP1 1343 aa6.81□□□□□ -1.32
LMNB1-208ENST00000504788 BCL9LQ86UU0 1499 aa6.81□□□□□ -1.32
LMNB1-208ENST00000504788 ARHGEF25Q86VW2 580 aa6.8□□□□□ -1.32
LMNB1-208ENST00000504788 FAM208AQ9UK61 1670 aaKnown RBP6.8□□□□□ -1.32
LMNB1-208ENST00000504788 PAK3O75914 559 aaPredicted RBP6.8□□□□□ -1.32
LMNB1-208ENST00000504788 NLRP13Q86W25 1043 aa6.8□□□□□ -1.32
LMNB1-208ENST00000504788 AXIN2Q9Y2T1 843 aa6.8□□□□□ -1.32
LMNB1-208ENST00000504788 KNSTRNQ9Y448 316 aa6.8□□□□□ -1.32
LMNB1-208ENST00000504788 INSRP06213 1382 aa6.8□□□□□ -1.32
LMNB1-208ENST00000504788 KIAA0232Q92628 1395 aa6.8□□□□□ -1.32
LMNB1-208ENST00000504788 NCAPD2Q15021 1401 aa6.79□□□□□ -1.32
LMNB1-208ENST00000504788 PRKRIP1Q9H875 184 aaPredicted RBP6.79□□□□□ -1.32
LMNB1-208ENST00000504788 POLKQ9UBT6 870 aa6.79□□□□□ -1.32
LMNB1-208ENST00000504788 MAP3K19Q56UN5 1328 aa6.79□□□□□ -1.32
LMNB1-208ENST00000504788 EP400Q96L91 3159 aa6.79□□□□□ -1.32
LMNB1-208ENST00000504788 COL5A2P05997 1499 aaPredicted RBP6.79□□□□□ -1.32
LMNB1-208ENST00000504788 CDK12Q9NYV4 1490 aaPredicted RBP6.79□□□□□ -1.32
LMNB1-208ENST00000504788 WNK3Q9BYP7 1800 aa6.78□□□□□ -1.32
LMNB1-208ENST00000504788 FAM83GA6ND36 823 aa6.78□□□□□ -1.32
LMNB1-208ENST00000504788 FNBP4Q8N3X1 1017 aaPredicted RBP6.78□□□□□ -1.32
LMNB1-208ENST00000504788 RGS17Q9UGC6 210 aaPredicted RBP6.78□□□□□ -1.32
LMNB1-208ENST00000504788 KIF24Q5T7B8 1368 aa6.78□□□□□ -1.32
LMNB1-208ENST00000504788 COG3Q96JB2 828 aa6.78□□□□□ -1.32
LMNB1-208ENST00000504788 EMILIN1Q9Y6C2 1016 aa6.78□□□□□ -1.32
LMNB1-208ENST00000504788 RTL1A6NKG5 1358 aa6.77□□□□□ -1.33
LMNB1-208ENST00000504788 GLI3P10071 1580 aa6.77□□□□□ -1.33
LMNB1-208ENST00000504788 RRS1Q15050 365 aaKnown RBP6.77□□□□□ -1.33
LMNB1-208ENST00000504788 CC2D1BQ5T0F9 858 aaKnown RBP6.77□□□□□ -1.33
LMNB1-208ENST00000504788 KCNH5Q8NCM2 988 aa6.77□□□□□ -1.33
LMNB1-208ENST00000504788 SHANK3Q9BYB0 1731 aa6.77□□□□□ -1.33
LMNB1-208ENST00000504788 BLMP54132 1417 aaPredicted RBP6.76□□□□□ -1.33
LMNB1-208ENST00000504788 ZC3H6P61129 1189 aaKnown RBP6.76□□□□□ -1.33
LMNB1-208ENST00000504788 LMOD2Q6P5Q4 547 aa6.76□□□□□ -1.33
LMNB1-208ENST00000504788 PIP4P2Q8N4L2 257 aa6.76□□□□□ -1.33
LMNB1-208ENST00000504788 FLT4P35916 1363 aa6.76□□□□□ -1.33
LMNB1-208ENST00000504788 ERBB3P21860 1342 aa6.76□□□□□ -1.33
LMNB1-208ENST00000504788 PPP2R1AP30153 589 aa6.76□□□□□ -1.33
LMNB1-208ENST00000504788 HOXC9P31274 260 aa6.76□□□□□ -1.33
LMNB1-208ENST00000504788 CHRNA2Q15822 529 aa6.76□□□□□ -1.33
LMNB1-208ENST00000504788 CCDC184Q52MB2 194 aa6.76□□□□□ -1.33
LMNB1-208ENST00000504788 HSP90AB2PQ58FF8 381 aa6.76□□□□□ -1.33
LMNB1-208ENST00000504788 IP6K1Q92551 441 aa6.76□□□□□ -1.33
LMNB1-208ENST00000504788 THSD7AQ9UPZ6 1657 aa6.75□□□□□ -1.33
LMNB1-208ENST00000504788 ATRNO75882 1429 aa6.75□□□□□ -1.33
LMNB1-208ENST00000504788 POLA2Q14181 598 aa6.75□□□□□ -1.33
LMNB1-208ENST00000504788 ADAMTS2O95450 1211 aa6.74□□□□□ -1.33
LMNB1-208ENST00000504788 MTHFSP49914 203 aa6.74□□□□□ -1.33
LMNB1-208ENST00000504788 MORC1Q86VD1 984 aa6.74□□□□□ -1.33
LMNB1-208ENST00000504788 PARP4Q9UKK3 1724 aaKnown RBP6.74□□□□□ -1.33
LMNB1-208ENST00000504788 DISP2A7MBM2 1401 aa6.74□□□□□ -1.33
LMNB1-208ENST00000504788 KDRP35968 1356 aa6.74□□□□□ -1.33
LMNB1-208ENST00000504788 NUTM2BA6NNL0 878 aaPredicted RBP6.73□□□□□ -1.33
LMNB1-208ENST00000504788 NUTM2EB1AL46 878 aaPredicted RBP6.73□□□□□ -1.33
LMNB1-208ENST00000504788 SOX12O15370 315 aa6.73□□□□□ -1.33
LMNB1-208ENST00000504788 RALBP1Q15311 655 aa6.73□□□□□ -1.33
LMNB1-208ENST00000504788 NUTM2AQ8IVF1 878 aaPredicted RBP6.73□□□□□ -1.33
LMNB1-208ENST00000504788 PRDM11Q9NQV5 511 aa6.73□□□□□ -1.33
LMNB1-208ENST00000504788 PKD1L3Q7Z443 1732 aa6.73□□□□□ -1.33
LMNB1-208ENST00000504788 WDR17Q8IZU2 1322 aa6.73□□□□□ -1.33
LMNB1-208ENST00000504788 MYBBP1AQ9BQG0 1328 aaKnown RBP6.73□□□□□ -1.33
LMNB1-208ENST00000504788 IL13P35225 146 aa6.73□□□□□ -1.33
LMNB1-208ENST00000504788 TNNT2P45379 298 aaPredicted RBP6.73□□□□□ -1.33
LMNB1-208ENST00000504788 BTG4Q9NY30 223 aa6.73□□□□□ -1.33
LMNB1-208ENST00000504788 LRRC37A3O60309 1634 aa6.73□□□□□ -1.33
LMNB1-208ENST00000504788 BRWD3Q6RI45 1802 aa6.73□□□□□ -1.33
LMNB1-208ENST00000504788 AFF2P51816 1311 aa6.72□□□□□ -1.33
LMNB1-208ENST00000504788 PLEKHG5O94827 1062 aa6.72□□□□□ -1.33
LMNB1-208ENST00000504788 EIF4A2Q14240 407 aaKnown RBP6.72□□□□□ -1.33
LMNB1-208ENST00000504788 UNC5CLQ8IV45 518 aa6.72□□□□□ -1.33
LMNB1-208ENST00000504788 C8orf37Q96NL8 207 aa6.72□□□□□ -1.33
LMNB1-208ENST00000504788 CRB1P82279 1406 aa6.72□□□□□ -1.33
LMNB1-208ENST00000504788 ADAMTS7Q9UKP4 1686 aa6.72□□□□□ -1.33
LMNB1-208ENST00000504788 IGSF1Q8N6C5 1336 aa6.72□□□□□ -1.33
LMNB1-208ENST00000504788 ONECUT3O60422 494 aaPredicted RBP6.71□□□□□ -1.33
LMNB1-208ENST00000504788 VPS72Q15906 364 aa6.71□□□□□ -1.33
LMNB1-208ENST00000504788 NBPF6Q5VWK0 638 aa6.71□□□□□ -1.33
LMNB1-208ENST00000504788 LARP1Q6PKG0 1096 aaKnown RBP6.71□□□□□ -1.33
LMNB1-208ENST00000504788 NBPF4Q96M43 638 aa6.71□□□□□ -1.33
LMNB1-208ENST00000504788 MEGF6O75095 1541 aa6.71□□□□□ -1.34
LMNB1-208ENST00000504788 VIRMAQ69YN4 1812 aaKnown RBP6.71□□□□□ -1.34
LMNB1-208ENST00000504788 SPATA31A1Q5TZJ5 1347 aa6.71□□□□□ -1.34
LMNB1-208ENST00000504788 SPATA31A5Q5VU36 1347 aa6.71□□□□□ -1.34
LMNB1-208ENST00000504788 SPATA31A7Q8IWB4 1347 aa6.71□□□□□ -1.34
LMNB1-208ENST00000504788 DIEXFQ68CQ4 756 aaKnown RBP6.71□□□□□ -1.34
LMNB1-208ENST00000504788 POTEAQ6S8J7 498 aa6.71□□□□□ -1.34
LMNB1-208ENST00000504788 EYA1Q99502 592 aa6.71□□□□□ -1.34
LMNB1-208ENST00000504788 DLG5Q8TDM6 1919 aa6.7□□□□□ -1.34
LMNB1-208ENST00000504788 CNGB1Q14028 1251 aaPredicted RBP6.7□□□□□ -1.34
LMNB1-208ENST00000504788 REM2Q8IYK8 340 aaPredicted RBP6.7□□□□□ -1.34
LMNB1-208ENST00000504788 ANKRD24Q8TF21 1146 aa6.7□□□□□ -1.34
LMNB1-208ENST00000504788 NGLY1Q96IV0 654 aa6.7□□□□□ -1.34
LMNB1-208ENST00000504788 ZBTB12Q9Y330 459 aaPredicted RBP6.7□□□□□ -1.34
LMNB1-208ENST00000504788 AMPHP49418 695 aa6.69□□□□□ -1.34
LMNB1-208ENST00000504788 CARD10Q9BWT7 1032 aa6.69□□□□□ -1.34
LMNB1-208ENST00000504788 USP21Q9UK80 565 aa6.69□□□□□ -1.34
LMNB1-208ENST00000504788 PLEKHG2Q9H7P9 1386 aa6.69□□□□□ -1.34
LMNB1-208ENST00000504788 OVOS2A0A0G2JMS6 1433 aa6.69□□□□□ -1.34
LMNB1-208ENST00000504788 TOGARAM1Q9Y4F4 1720 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms