RNA–Protein interactions for RNA: ENST00000504612.5

ATP2C1-207, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2C1, Length 3,148 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-207ENST00000504612 NEURL4Q96JN8 1562 aa6.72□□□□□ -1.33
ATP2C1-207ENST00000504612 CASKIN1Q8WXD9 1431 aa6.72□□□□□ -1.33
ATP2C1-207ENST00000504612 EXOC8Q8IYI6 725 aa6.72□□□□□ -1.33
ATP2C1-207ENST00000504612 POGKQ9P215 609 aa6.72□□□□□ -1.33
ATP2C1-207ENST00000504612 FYCO1Q9BQS8 1478 aa6.71□□□□□ -1.33
ATP2C1-207ENST00000504612 ZC3H13Q5T200 1668 aaKnown RBP6.71□□□□□ -1.33
ATP2C1-207ENST00000504612 FARP1Q9Y4F1 1045 aaPredicted RBP6.71□□□□□ -1.34
ATP2C1-207ENST00000504612 KIAA1107Q9UPP5 1409 aa6.71□□□□□ -1.34
ATP2C1-207ENST00000504612 SGSM3Q96HU1 749 aa6.71□□□□□ -1.34
ATP2C1-207ENST00000504612 RRAGDQ9NQL2 400 aaPredicted RBP6.71□□□□□ -1.34
ATP2C1-207ENST00000504612 EMILIN3Q9NT22 766 aa6.71□□□□□ -1.34
ATP2C1-207ENST00000504612 DNMT1P26358 1616 aaKnown RBP6.71□□□□□ -1.34
ATP2C1-207ENST00000504612 ALKQ9UM73 1620 aa6.71□□□□□ -1.34
ATP2C1-207ENST00000504612 ZNF644Q9H582 1327 aaPredicted RBP6.71□□□□□ -1.34
ATP2C1-207ENST00000504612 SPDYE2BA6NHP3 402 aa6.7□□□□□ -1.34
ATP2C1-207ENST00000504612 SPDYE5A6NIY4 337 aa6.7□□□□□ -1.34
ATP2C1-207ENST00000504612 SPDYE6P0CI01 402 aa6.7□□□□□ -1.34
ATP2C1-207ENST00000504612 SPDYE2Q495Y8 402 aa6.7□□□□□ -1.34
ATP2C1-207ENST00000504612 ATP7AQ04656 1500 aa6.7□□□□□ -1.34
ATP2C1-207ENST00000504612 SYNMO15061 1565 aa6.7□□□□□ -1.34
ATP2C1-207ENST00000504612 RNF17Q9BXT8 1623 aaKnown RBP6.7□□□□□ -1.34
ATP2C1-207ENST00000504612 PHOX2BQ99453 314 aa6.7□□□□□ -1.34
ATP2C1-207ENST00000504612 ZBTB12Q9Y330 459 aaPredicted RBP6.7□□□□□ -1.34
ATP2C1-207ENST00000504612 KDM5AP29375 1690 aaKnown RBP6.7□□□□□ -1.34
ATP2C1-207ENST00000504612 HDGFL1Q5TGJ6 251 aa6.7□□□□□ -1.34
ATP2C1-207ENST00000504612 USTQ9Y2C2 406 aa6.7□□□□□ -1.34
ATP2C1-207ENST00000504612 MYOM3Q5VTT5 1437 aa6.7□□□□□ -1.34
ATP2C1-207ENST00000504612 SPATA31E1Q6ZUB1 1445 aa6.7□□□□□ -1.34
ATP2C1-207ENST00000504612 USP47Q96K76 1375 aa6.69□□□□□ -1.34
ATP2C1-207ENST00000504612 GRXCR2A6NFK2 248 aa6.69□□□□□ -1.34
ATP2C1-207ENST00000504612 TPD52L2O43399 206 aaKnown RBP6.69□□□□□ -1.34
ATP2C1-207ENST00000504612 CHRM1P11229 460 aaPredicted RBP6.69□□□□□ -1.34
ATP2C1-207ENST00000504612 CAMK2BQ13554 666 aa6.69□□□□□ -1.34
ATP2C1-207ENST00000504612 CRISPLD2Q9H0B8 497 aa6.69□□□□□ -1.34
ATP2C1-207ENST00000504612 SLKQ9H2G2 1235 aaPredicted RBP6.69□□□□□ -1.34
ATP2C1-207ENST00000504612 PLEKHH2Q8IVE3 1493 aa6.69□□□□□ -1.34
ATP2C1-207ENST00000504612 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.69□□□□□ -1.34
ATP2C1-207ENST00000504612 EIF2AK4Q9P2K8 1649 aaKnown RBP6.69□□□□□ -1.34
ATP2C1-207ENST00000504612 MNX1P50219 401 aaPredicted RBP6.69□□□□□ -1.34
ATP2C1-207ENST00000504612 RBM46Q8TBY0 533 aaKnown RBP6.69□□□□□ -1.34
ATP2C1-207ENST00000504612 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.69□□□□□ -1.34
ATP2C1-207ENST00000504612 CPS1P31327 1500 aa6.69□□□□□ -1.34
ATP2C1-207ENST00000504612 SOCS7O14512 581 aa6.68□□□□□ -1.34
ATP2C1-207ENST00000504612 MFSD10Q14728 455 aa6.68□□□□□ -1.34
ATP2C1-207ENST00000504612 CC2D1BQ5T0F9 858 aaKnown RBP6.68□□□□□ -1.34
ATP2C1-207ENST00000504612 VWDEQ8N2E2 1590 aa6.68□□□□□ -1.34
ATP2C1-207ENST00000504612 STRCP1A6NGW2 1772 aa6.68□□□□□ -1.34
ATP2C1-207ENST00000504612 ST20-MTHFSA0A0A6YYL1 179 aa6.68□□□□□ -1.34
ATP2C1-207ENST00000504612 RECKO95980 971 aa6.68□□□□□ -1.34
ATP2C1-207ENST00000504612 EFCAB2Q5VUJ9 269 aa6.68□□□□□ -1.34
ATP2C1-207ENST00000504612 EFCAB3Q8N7B9 438 aa6.68□□□□□ -1.34
ATP2C1-207ENST00000504612 XIRP1Q702N8 1843 aaKnown RBP6.68□□□□□ -1.34
ATP2C1-207ENST00000504612 MAST1Q9Y2H9 1570 aa6.68□□□□□ -1.34
ATP2C1-207ENST00000504612 PHLDB3Q6NSJ2 640 aa6.67□□□□□ -1.34
ATP2C1-207ENST00000504612 TBC1D2Q9BYX2 928 aa6.67□□□□□ -1.34
ATP2C1-207ENST00000504612 ANKRD30BQ9BXX2 1392 aa6.67□□□□□ -1.34
ATP2C1-207ENST00000504612 SBNO2Q9Y2G9 1366 aa6.67□□□□□ -1.34
ATP2C1-207ENST00000504612 MED14O60244 1454 aa6.67□□□□□ -1.34
ATP2C1-207ENST00000504612 RFC5P40937 340 aa6.67□□□□□ -1.34
ATP2C1-207ENST00000504612 SYCP2Q9BX26 1530 aa6.67□□□□□ -1.34
ATP2C1-207ENST00000504612 PARNO95453 639 aaKnown RBP6.67□□□□□ -1.34
ATP2C1-207ENST00000504612 C8orf34Q49A92 452 aa6.67□□□□□ -1.34
ATP2C1-207ENST00000504612 UBXN4Q92575 508 aa6.67□□□□□ -1.34
ATP2C1-207ENST00000504612 GPATCH8Q9UKJ3 1502 aaKnown RBP6.67□□□□□ -1.34
ATP2C1-207ENST00000504612 PATL2C9JE40 543 aaKnown RBP6.66□□□□□ -1.34
ATP2C1-207ENST00000504612 CARD11Q9BXL7 1154 aa6.66□□□□□ -1.34
ATP2C1-207ENST00000504612 RTEL1-TNFRSF6BF6WH68 1400 aa6.66□□□□□ -1.34
ATP2C1-207ENST00000504612 A2ML1A8K2U0 1454 aa6.66□□□□□ -1.34
ATP2C1-207ENST00000504612 ARHGEF5Q12774 1597 aa6.66□□□□□ -1.34
ATP2C1-207ENST00000504612 CAMSAP2Q08AD1 1489 aa6.66□□□□□ -1.34
ATP2C1-207ENST00000504612 MED1Q15648 1581 aaPredicted RBP6.66□□□□□ -1.34
ATP2C1-207ENST00000504612 SEC24BO95487 1268 aa6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 LMOD1P29536 600 aaPredicted RBP6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 HSPA2P54652 639 aa6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 APBB1IPQ7Z5R6 666 aaPredicted RBP6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 NAP1L5Q96NT1 182 aaPredicted RBP6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 BEGAINQ9BUH8 593 aa6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 KDM5DQ9BY66 1539 aa6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 GNPATO15228 680 aa6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 NCLP19338 710 aaKnown RBP6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 SERPINB4P48594 390 aa6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 MDM2Q00987 491 aaPredicted RBP6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 CNPY4Q8N129 248 aa6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 FAM43AQ8N2R8 423 aa6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 PANK2Q9BZ23 570 aa6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 GABBR1Q9UBS5 961 aa6.65□□□□□ -1.34
ATP2C1-207ENST00000504612 PRIM1P49642 420 aaKnown RBP6.65□□□□□ -1.35
ATP2C1-207ENST00000504612 ZC3H6P61129 1189 aaKnown RBP6.65□□□□□ -1.35
ATP2C1-207ENST00000504612 IQGAP1P46940 1657 aa6.65□□□□□ -1.35
ATP2C1-207ENST00000504612 RPRD2Q5VT52 1461 aaKnown RBP6.64□□□□□ -1.35
ATP2C1-207ENST00000504612 MYBBP1AQ9BQG0 1328 aaKnown RBP6.64□□□□□ -1.35
ATP2C1-207ENST00000504612 A2MP01023 1474 aa6.64□□□□□ -1.35
ATP2C1-207ENST00000504612 LRPPRCP42704 1394 aaKnown RBP6.64□□□□□ -1.35
ATP2C1-207ENST00000504612 TSR1Q2NL82 804 aaKnown RBP6.64□□□□□ -1.35
ATP2C1-207ENST00000504612 TSNAXIP1Q2TAA8 658 aa6.64□□□□□ -1.35
ATP2C1-207ENST00000504612 MYSM1Q5VVJ2 828 aa6.64□□□□□ -1.35
ATP2C1-207ENST00000504612 ILDR2Q71H61 639 aa6.64□□□□□ -1.35
ATP2C1-207ENST00000504612 UCN2Q96RP3 112 aa6.64□□□□□ -1.35
ATP2C1-207ENST00000504612 MYH16Q9H6N6 1097 aa6.64□□□□□ -1.35
ATP2C1-207ENST00000504612 MBD5Q9P267 1494 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms