RNA–Protein interactions for RNA: ENST00000504465.5

CAST-213, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-213ENST00000504465 MBIPQ9NS73 344 aa11.27□□□□□ -0.6
CAST-213ENST00000504465 IFT57Q9NWB7 429 aa11.27□□□□□ -0.6
CAST-213ENST00000504465 ABCC4O15439 1325 aa11.27□□□□□ -0.61
CAST-213ENST00000504465 GCC1Q96CN9 775 aa11.27□□□□□ -0.61
CAST-213ENST00000504465 GZF1Q9H116 711 aaPredicted RBP11.27□□□□□ -0.61
CAST-213ENST00000504465 ATP7BP35670 1465 aa11.27□□□□□ -0.61
CAST-213ENST00000504465 GOLGA6L3A6NEY3 463 aa11.26□□□□□ -0.61
CAST-213ENST00000504465 ZRANB1Q9UGI0 708 aa11.26□□□□□ -0.61
CAST-213ENST00000504465 CPSF1Q10570 1443 aaKnown RBP11.26□□□□□ -0.61
CAST-213ENST00000504465 DLC1Q96QB1 1528 aa11.26□□□□□ -0.61
CAST-213ENST00000504465 ELL2O00472 640 aaPredicted RBP11.25□□□□□ -0.61
CAST-213ENST00000504465 CD2BP2O95400 341 aaKnown RBP11.25□□□□□ -0.61
CAST-213ENST00000504465 GNAI1P63096 354 aa11.25□□□□□ -0.61
CAST-213ENST00000504465 C8orf58Q8NAV2 365 aa11.25□□□□□ -0.61
CAST-213ENST00000504465 PANK2Q9BZ23 570 aa11.25□□□□□ -0.61
CAST-213ENST00000504465 KIF20BQ96Q89 1820 aa11.25□□□□□ -0.61
CAST-213ENST00000504465 TBC1D9Q6ZT07 1266 aa11.25□□□□□ -0.61
CAST-213ENST00000504465 NME9Q86XW9 330 aa11.25□□□□□ -0.61
CAST-213ENST00000504465 CALD1Q05682 793 aaKnown RBP11.24□□□□□ -0.61
CAST-213ENST00000504465 TNPO1Q92973 898 aaKnown RBP11.24□□□□□ -0.61
CAST-213ENST00000504465 A2ML1A8K2U0 1454 aa11.23□□□□□ -0.61
CAST-213ENST00000504465 AATKQ6ZMQ8 1374 aa11.23□□□□□ -0.61
CAST-213ENST00000504465 EDC4Q6P2E9 1401 aaKnown RBP11.23□□□□□ -0.61
CAST-213ENST00000504465 TWISTNBQ3B726 338 aaPredicted RBP11.23□□□□□ -0.61
CAST-213ENST00000504465 CFAP44Q96MT7 982 aa11.23□□□□□ -0.61
CAST-213ENST00000504465 ARXQ96QS3 562 aa11.23□□□□□ -0.61
CAST-213ENST00000504465 CHMP4BQ9H444 224 aaKnown RBP11.23□□□□□ -0.61
CAST-213ENST00000504465 CIZ1Q9ULV3 898 aaPredicted RBP11.23□□□□□ -0.61
CAST-213ENST00000504465 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
CAST-213ENST00000504465 WASLO00401 505 aaPredicted RBP11.23□□□□□ -0.61
CAST-213ENST00000504465 RAB3GAP1Q15042 981 aa11.23□□□□□ -0.61
CAST-213ENST00000504465 RBM42Q9BTD8 480 aaKnown RBP11.23□□□□□ -0.61
CAST-213ENST00000504465 STAG3Q9UJ98 1225 aa11.23□□□□□ -0.61
CAST-213ENST00000504465 CDK12Q9NYV4 1490 aaPredicted RBP11.23□□□□□ -0.61
CAST-213ENST00000504465 FAM83GA6ND36 823 aa11.22□□□□□ -0.61
CAST-213ENST00000504465 NCKAP5LQ9HCH0 1330 aa11.22□□□□□ -0.61
CAST-213ENST00000504465 RIMS2Q9UQ26 1411 aa11.22□□□□□ -0.61
CAST-213ENST00000504465 GSPT1P15170 499 aaKnown RBP11.21□□□□□ -0.61
CAST-213ENST00000504465 HSP90AB1P08238 724 aaKnown RBP11.21□□□□□ -0.62
CAST-213ENST00000504465 DCTN1Q14203 1278 aa11.21□□□□□ -0.62
CAST-213ENST00000504465 RRS1Q15050 365 aaKnown RBP11.21□□□□□ -0.62
CAST-213ENST00000504465 CPS1P31327 1500 aa11.21□□□□□ -0.62
CAST-213ENST00000504465 MRE11P49959 708 aa11.2□□□□□ -0.62
CAST-213ENST00000504465 PLEKHM2Q8IWE5 1019 aa11.2□□□□□ -0.62
CAST-213ENST00000504465 API5Q9BZZ5 524 aaKnown RBP11.2□□□□□ -0.62
CAST-213ENST00000504465 KIF24Q5T7B8 1368 aa11.2□□□□□ -0.62
CAST-213ENST00000504465 RIMBP3CA6NJZ7 1639 aa11.2□□□□□ -0.62
CAST-213ENST00000504465 RIMBP3BA6NNM3 1639 aa11.2□□□□□ -0.62
CAST-213ENST00000504465 RIMBP3Q9UFD9 1639 aa11.2□□□□□ -0.62
CAST-213ENST00000504465 SETD1AO15047 1707 aaKnown RBP11.2□□□□□ -0.62
CAST-213ENST00000504465 DCTPP1Q9H773 170 aa11.2□□□□□ -0.62
CAST-213ENST00000504465 METP08581 1390 aa11.2□□□□□ -0.62
CAST-213ENST00000504465 K7ELQ4 463 aaPredicted RBP11.19□□□□□ -0.62
CAST-213ENST00000504465 GAS2L3Q86XJ1 694 aa11.19□□□□□ -0.62
CAST-213ENST00000504465 GAS2L2Q8NHY3 880 aa11.19□□□□□ -0.62
CAST-213ENST00000504465 NUDT16Q96DE0 195 aaKnown RBP11.19□□□□□ -0.62
CAST-213ENST00000504465 CDC45O75419 566 aa11.19□□□□□ -0.62
CAST-213ENST00000504465 LMOD3Q0VAK6 560 aa11.19□□□□□ -0.62
CAST-213ENST00000504465 INTS3Q68E01 1043 aaKnown RBP11.19□□□□□ -0.62
CAST-213ENST00000504465 GRPEL1Q9HAV7 217 aa11.19□□□□□ -0.62
CAST-213ENST00000504465 FOXD4L1Q9NU39 408 aa11.19□□□□□ -0.62
CAST-213ENST00000504465 RGS12O14924 1447 aa11.18□□□□□ -0.62
CAST-213ENST00000504465 TXNDC2Q86VQ3 553 aa11.18□□□□□ -0.62
CAST-213ENST00000504465 C16orf71Q8IYS4 520 aaPredicted RBP11.18□□□□□ -0.62
CAST-213ENST00000504465 PPP6R1Q9UPN7 881 aa11.18□□□□□ -0.62
CAST-213ENST00000504465 KRT24Q2M2I5 525 aa11.18□□□□□ -0.62
CAST-213ENST00000504465 COG3Q96JB2 828 aa11.18□□□□□ -0.62
CAST-213ENST00000504465 MAP2P11137 1827 aaKnown RBP11.18□□□□□ -0.62
CAST-213ENST00000504465 KNDC1Q76NI1 1749 aa11.17□□□□□ -0.62
CAST-213ENST00000504465 SPATA31D1Q6ZQQ2 1576 aa11.17□□□□□ -0.62
CAST-213ENST00000504465 CLEC17AQ6ZS10 378 aa11.17□□□□□ -0.62
CAST-213ENST00000504465 AEBP1Q8IUX7 1158 aa11.17□□□□□ -0.62
CAST-213ENST00000504465 REREQ9P2R6 1566 aa11.17□□□□□ -0.62
CAST-213ENST00000504465 SSFA2P28290 1259 aa11.17□□□□□ -0.62
CAST-213ENST00000504465 TTC22Q5TAA0 569 aa11.17□□□□□ -0.62
CAST-213ENST00000504465 ANKRD44Q8N8A2 993 aa11.17□□□□□ -0.62
CAST-213ENST00000504465 GBP4Q96PP9 640 aa11.17□□□□□ -0.62
CAST-213ENST00000504465 ISY1Q9ULR0 285 aaKnown RBP11.17□□□□□ -0.62
CAST-213ENST00000504465 CCDC61Q9Y6R9 512 aa11.17□□□□□ -0.62
CAST-213ENST00000504465 ATP10DQ9P241 1426 aa11.16□□□□□ -0.62
CAST-213ENST00000504465 NRXN3Q9Y4C0 1643 aa11.16□□□□□ -0.62
CAST-213ENST00000504465 PRR36Q9H6K5 1346 aa11.16□□□□□ -0.62
CAST-213ENST00000504465 CHL1O00533 1208 aa11.16□□□□□ -0.62
CAST-213ENST00000504465 OTUD7AQ8TE49 926 aaPredicted RBP11.16□□□□□ -0.62
CAST-213ENST00000504465 SIRT1Q96EB6 747 aa11.16□□□□□ -0.62
CAST-213ENST00000504465 AGLP35573 1532 aa11.16□□□□□ -0.62
CAST-213ENST00000504465 PRKCSHP14314 528 aaPredicted RBP11.15□□□□□ -0.62
CAST-213ENST00000504465 CLCN1P35523 988 aa11.15□□□□□ -0.62
CAST-213ENST00000504465 EIF4A2Q14240 407 aaKnown RBP11.15□□□□□ -0.62
CAST-213ENST00000504465 USP26Q9BXU7 913 aa11.15□□□□□ -0.62
CAST-213ENST00000504465 SKOR2Q2VWA4 1001 aaPredicted RBP11.15□□□□□ -0.62
CAST-213ENST00000504465 CEP85Q6P2H3 762 aa11.15□□□□□ -0.62
CAST-213ENST00000504465 EIF5BO60841 1220 aaKnown RBP11.14□□□□□ -0.63
CAST-213ENST00000504465 SULT6B1Q6IMI4 303 aa11.14□□□□□ -0.63
CAST-213ENST00000504465 TECPR2O15040 1411 aa11.13□□□□□ -0.63
CAST-213ENST00000504465 RABEP1Q15276 862 aa11.13□□□□□ -0.63
CAST-213ENST00000504465 MCM10Q7L590 875 aa11.13□□□□□ -0.63
CAST-213ENST00000504465 RPAP2Q8IXW5 612 aaPredicted RBP11.13□□□□□ -0.63
CAST-213ENST00000504465 RTL1A6NKG5 1358 aa11.13□□□□□ -0.63
CAST-213ENST00000504465 ERBB4Q15303 1308 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms