RNA–Protein interactions for RNA: ENST00000504208.5

KLHL3-204, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-204ENST00000504208 TTC21AQ8NDW8 1320 aa12.38□□□□□ -0.43
KLHL3-204ENST00000504208 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.38□□□□□ -0.43
KLHL3-204ENST00000504208 SLAIN2Q9P270 581 aa12.38□□□□□ -0.43
KLHL3-204ENST00000504208 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
KLHL3-204ENST00000504208 U2SURPO15042 1029 aaKnown RBP12.37□□□□□ -0.43
KLHL3-204ENST00000504208 TMPOP42166 694 aaKnown RBP12.37□□□□□ -0.43
KLHL3-204ENST00000504208 BRINP3Q76B58 766 aa12.37□□□□□ -0.43
KLHL3-204ENST00000504208 TTC21BQ7Z4L5 1316 aa12.36□□□□□ -0.43
KLHL3-204ENST00000504208 CALD1Q05682 793 aaKnown RBP12.36□□□□□ -0.43
KLHL3-204ENST00000504208 MED1Q15648 1581 aaPredicted RBP12.36□□□□□ -0.43
KLHL3-204ENST00000504208 OVOS2A0A0J9YW53 1432 aa12.36□□□□□ -0.43
KLHL3-204ENST00000504208 OVOS2Q6IE36 1432 aa12.36□□□□□ -0.43
KLHL3-204ENST00000504208 NPHP3Q7Z494 1330 aa12.35□□□□□ -0.43
KLHL3-204ENST00000504208 UBAP1LF5GYI3 381 aa12.35□□□□□ -0.43
KLHL3-204ENST00000504208 TCERG1O14776 1098 aaKnown RBP12.35□□□□□ -0.43
KLHL3-204ENST00000504208 CRBNQ96SW2 442 aa12.35□□□□□ -0.43
KLHL3-204ENST00000504208 TNS3Q68CZ2 1445 aa12.35□□□□□ -0.43
KLHL3-204ENST00000504208 USP31Q70CQ4 1352 aa12.35□□□□□ -0.43
KLHL3-204ENST00000504208 FOXO3O43524 673 aa12.35□□□□□ -0.43
KLHL3-204ENST00000504208 PLIN1O60240 522 aa12.35□□□□□ -0.43
KLHL3-204ENST00000504208 MS4A1P11836 297 aa12.35□□□□□ -0.43
KLHL3-204ENST00000504208 IL13P35225 146 aa12.35□□□□□ -0.43
KLHL3-204ENST00000504208 XPCQ01831 940 aaPredicted RBP12.35□□□□□ -0.43
KLHL3-204ENST00000504208 NME9Q86XW9 330 aa12.35□□□□□ -0.43
KLHL3-204ENST00000504208 ZNF428Q96B54 188 aa12.35□□□□□ -0.43
KLHL3-204ENST00000504208 FANCIQ9NVI1 1328 aa12.34□□□□□ -0.43
KLHL3-204ENST00000504208 DDX17Q92841 729 aaKnown RBP12.34□□□□□ -0.43
KLHL3-204ENST00000504208 RSPH6AQ9H0K4 717 aa12.34□□□□□ -0.43
KLHL3-204ENST00000504208 TOM1O60784 492 aa12.33□□□□□ -0.44
KLHL3-204ENST00000504208 RARSP54136 660 aaKnown RBP12.33□□□□□ -0.44
KLHL3-204ENST00000504208 PSME1Q06323 249 aa12.33□□□□□ -0.44
KLHL3-204ENST00000504208 NEUROD2Q15784 382 aa12.33□□□□□ -0.44
KLHL3-204ENST00000504208 TRIM35Q9UPQ4 493 aa12.33□□□□□ -0.44
KLHL3-204ENST00000504208 RRP7AQ9Y3A4 280 aaKnown RBP12.33□□□□□ -0.44
KLHL3-204ENST00000504208 COL22A1Q8NFW1 1626 aaPredicted RBP12.33□□□□□ -0.44
KLHL3-204ENST00000504208 SLIT3O75094 1523 aa12.32□□□□□ -0.44
KLHL3-204ENST00000504208 LMOD3Q0VAK6 560 aa12.32□□□□□ -0.44
KLHL3-204ENST00000504208 CENPQQ7L2Z9 268 aaPredicted RBP12.32□□□□□ -0.44
KLHL3-204ENST00000504208 SBNO1A3KN83 1393 aa12.32□□□□□ -0.44
KLHL3-204ENST00000504208 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
KLHL3-204ENST00000504208 RIPK4P57078 832 aa12.31□□□□□ -0.44
KLHL3-204ENST00000504208 KRT28Q7Z3Y7 464 aa12.31□□□□□ -0.44
KLHL3-204ENST00000504208 NFAT5O94916 1531 aa12.31□□□□□ -0.44
KLHL3-204ENST00000504208 KIF24Q5T7B8 1368 aa12.31□□□□□ -0.44
KLHL3-204ENST00000504208 PEAK1Q9H792 1746 aa12.31□□□□□ -0.44
KLHL3-204ENST00000504208 NFE2L2Q16236 605 aa12.3□□□□□ -0.44
KLHL3-204ENST00000504208 C20orf194Q5TEA3 1177 aa12.3□□□□□ -0.44
KLHL3-204ENST00000504208 BCAR3O75815 825 aa12.3□□□□□ -0.44
KLHL3-204ENST00000504208 PIP4K2BP78356 416 aa12.3□□□□□ -0.44
KLHL3-204ENST00000504208 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
KLHL3-204ENST00000504208 EMILIN1Q9Y6C2 1016 aa12.3□□□□□ -0.44
KLHL3-204ENST00000504208 RGPD5Q99666 1765 aa12.29□□□□□ -0.44
KLHL3-204ENST00000504208 SOS2Q07890 1332 aaPredicted RBP12.29□□□□□ -0.44
KLHL3-204ENST00000504208 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
KLHL3-204ENST00000504208 PRKAR2BP31323 418 aa12.29□□□□□ -0.44
KLHL3-204ENST00000504208 ARHGEF10O15013 1369 aa12.28□□□□□ -0.44
KLHL3-204ENST00000504208 PPM1GO15355 546 aaPredicted RBP12.28□□□□□ -0.44
KLHL3-204ENST00000504208 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
KLHL3-204ENST00000504208 ABTB2Q8N961 1025 aa12.28□□□□□ -0.44
KLHL3-204ENST00000504208 CANXP27824 592 aaKnown RBP12.27□□□□□ -0.44
KLHL3-204ENST00000504208 ALDH1L2Q3SY69 923 aa12.27□□□□□ -0.44
KLHL3-204ENST00000504208 NUTM2GQ5VZR2 741 aa12.27□□□□□ -0.44
KLHL3-204ENST00000504208 SPATA31A3Q5VYP0 1347 aa12.27□□□□□ -0.45
KLHL3-204ENST00000504208 LMOD2Q6P5Q4 547 aa12.26□□□□□ -0.45
KLHL3-204ENST00000504208 NLRP6P59044 892 aa12.26□□□□□ -0.45
KLHL3-204ENST00000504208 GNAI1P63096 354 aa12.26□□□□□ -0.45
KLHL3-204ENST00000504208 IFT57Q9NWB7 429 aa12.26□□□□□ -0.45
KLHL3-204ENST00000504208 USP19O94966 1318 aa12.25□□□□□ -0.45
KLHL3-204ENST00000504208 IPO8O15397 1037 aaKnown RBP12.25□□□□□ -0.45
KLHL3-204ENST00000504208 HAP1P54257 671 aaPredicted RBP12.25□□□□□ -0.45
KLHL3-204ENST00000504208 ZKSCAN2Q63HK3 967 aa12.25□□□□□ -0.45
KLHL3-204ENST00000504208 PLCH1Q4KWH8 1693 aa12.24□□□□□ -0.45
KLHL3-204ENST00000504208 RGPD2P0DJD1 1756 aa12.24□□□□□ -0.45
KLHL3-204ENST00000504208 COL18A1P39060 1754 aa12.24□□□□□ -0.45
KLHL3-204ENST00000504208 ZNF853P0CG23 659 aa12.24□□□□□ -0.45
KLHL3-204ENST00000504208 KCNA4P22459 653 aa12.24□□□□□ -0.45
KLHL3-204ENST00000504208 RRS1Q15050 365 aaKnown RBP12.24□□□□□ -0.45
KLHL3-204ENST00000504208 CLUAP1Q96AJ1 413 aa12.24□□□□□ -0.45
KLHL3-204ENST00000504208 FAM208AQ9UK61 1670 aaKnown RBP12.24□□□□□ -0.45
KLHL3-204ENST00000504208 FLT4P35916 1363 aa12.24□□□□□ -0.45
KLHL3-204ENST00000504208 SOX12O15370 315 aa12.23□□□□□ -0.45
KLHL3-204ENST00000504208 FBLN1P23142 703 aa12.23□□□□□ -0.45
KLHL3-204ENST00000504208 HSPA1LP34931 641 aa12.23□□□□□ -0.45
KLHL3-204ENST00000504208 EXOSC9Q06265 439 aaKnown RBP12.23□□□□□ -0.45
KLHL3-204ENST00000504208 EIF4A2Q14240 407 aaKnown RBP12.23□□□□□ -0.45
KLHL3-204ENST00000504208 ABCC6O95255 1503 aa12.23□□□□□ -0.45
KLHL3-204ENST00000504208 KIF16BQ96L93 1317 aa12.23□□□□□ -0.45
KLHL3-204ENST00000504208 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
KLHL3-204ENST00000504208 ARHGAP45Q92619 1136 aa12.22□□□□□ -0.45
KLHL3-204ENST00000504208 PHACTR3Q96KR7 559 aa12.22□□□□□ -0.45
KLHL3-204ENST00000504208 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
KLHL3-204ENST00000504208 CHMP4BQ9H444 224 aaKnown RBP12.22□□□□□ -0.45
KLHL3-204ENST00000504208 LMO7Q8WWI1 1683 aa12.22□□□□□ -0.45
KLHL3-204ENST00000504208 RGPD1P0DJD0 1748 aa12.22□□□□□ -0.45
KLHL3-204ENST00000504208 HMOX1P09601 288 aa12.22□□□□□ -0.45
KLHL3-204ENST00000504208 COL14A1Q05707 1796 aaKnown RBP12.21□□□□□ -0.45
KLHL3-204ENST00000504208 DZIP1LQ8IYY4 767 aaKnown RBP12.21□□□□□ -0.46
KLHL3-204ENST00000504208 FRAT1Q92837 279 aaPredicted RBP12.21□□□□□ -0.46
KLHL3-204ENST00000504208 TSR2Q969E8 191 aaKnown RBP12.21□□□□□ -0.46
KLHL3-204ENST00000504208 KDRP35968 1356 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms