RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 TRAF7Q6Q0C0 670 aa8.41□□□□□ -1.06
SCLT1-206ENST00000503565 HPS1Q92902 700 aa8.41□□□□□ -1.06
SCLT1-206ENST00000503565 PBXIP1Q96AQ6 731 aa8.41□□□□□ -1.06
SCLT1-206ENST00000503565 ACIN1Q9UKV3 1341 aaKnown RBP8.4□□□□□ -1.06
SCLT1-206ENST00000503565 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.4□□□□□ -1.06
SCLT1-206ENST00000503565 ALDH1A1P00352 501 aa8.4□□□□□ -1.06
SCLT1-206ENST00000503565 NBPF14Q5TI25 921 aa8.4□□□□□ -1.06
SCLT1-206ENST00000503565 BPHLQ86WA6 291 aaPredicted RBP8.4□□□□□ -1.06
SCLT1-206ENST00000503565 MPNDQ8N594 471 aa8.4□□□□□ -1.06
SCLT1-206ENST00000503565 GPKOWQ92917 476 aaPredicted RBP eCLIP8.4□□□□□ -1.06
SCLT1-206ENST00000503565 VAC14Q08AM6 782 aa8.39□□□□□ -1.07
SCLT1-206ENST00000503565 PKDCCQ504Y2 493 aa8.39□□□□□ -1.07
SCLT1-206ENST00000503565 CDK15Q96Q40 435 aa8.39□□□□□ -1.07
SCLT1-206ENST00000503565 GZF1Q9H116 711 aaPredicted RBP8.39□□□□□ -1.07
SCLT1-206ENST00000503565 ZC3H4Q9UPT8 1303 aaKnown RBP8.38□□□□□ -1.07
SCLT1-206ENST00000503565 ST8SIA5O15466 376 aa8.38□□□□□ -1.07
SCLT1-206ENST00000503565 RFX1P22670 979 aa8.38□□□□□ -1.07
SCLT1-206ENST00000503565 GRM5P41594 1212 aa8.38□□□□□ -1.07
SCLT1-206ENST00000503565 WASHC4Q2M389 1173 aa8.38□□□□□ -1.07
SCLT1-206ENST00000503565 ERFEQ4G0M1 354 aa8.38□□□□□ -1.07
SCLT1-206ENST00000503565 RGS22Q8NE09 1264 aa8.38□□□□□ -1.07
SCLT1-206ENST00000503565 DACH1Q9UI36 760 aa8.38□□□□□ -1.07
SCLT1-206ENST00000503565 MAGEB6P1A0A0J9YX57 407 aa8.37□□□□□ -1.07
SCLT1-206ENST00000503565 AGERQ15109 404 aa8.37□□□□□ -1.07
SCLT1-206ENST00000503565 TRMT44Q8IYL2 757 aaKnown RBP8.37□□□□□ -1.07
SCLT1-206ENST00000503565 FAM174AQ8TBP5 190 aa8.37□□□□□ -1.07
SCLT1-206ENST00000503565 CARD14Q9BXL6 1004 aa8.37□□□□□ -1.07
SCLT1-206ENST00000503565 PPP1R12CQ9BZL4 782 aa8.37□□□□□ -1.07
SCLT1-206ENST00000503565 ALG2Q9H553 416 aa8.37□□□□□ -1.07
SCLT1-206ENST00000503565 AAASQ9NRG9 546 aa8.37□□□□□ -1.07
SCLT1-206ENST00000503565 TMCO4Q5TGY1 634 aa8.36□□□□□ -1.07
SCLT1-206ENST00000503565 CRIPAKQ8N1N5 446 aa8.36□□□□□ -1.07
SCLT1-206ENST00000503565 ARHGAP9Q9BRR9 750 aa8.36□□□□□ -1.07
SCLT1-206ENST00000503565 KLF16Q9BXK1 252 aaPredicted RBP8.36□□□□□ -1.07
SCLT1-206ENST00000503565 NR3C2P08235 984 aa8.35□□□□□ -1.07
SCLT1-206ENST00000503565 ADAM32Q8TC27 787 aa8.35□□□□□ -1.07
SCLT1-206ENST00000503565 UCN2Q96RP3 112 aa8.35□□□□□ -1.07
SCLT1-206ENST00000503565 GPSM3Q9Y4H4 160 aa8.35□□□□□ -1.07
SCLT1-206ENST00000503565 CARNS1A5YM72 827 aa8.34□□□□□ -1.07
SCLT1-206ENST00000503565 PALM3A6NDB9 673 aaPredicted RBP8.34□□□□□ -1.07
SCLT1-206ENST00000503565 SMCPP49901 116 aaPredicted RBP8.34□□□□□ -1.07
SCLT1-206ENST00000503565 PDE4CQ08493 712 aa8.34□□□□□ -1.07
SCLT1-206ENST00000503565 POTECB2RU33 542 aa8.33□□□□□ -1.08
SCLT1-206ENST00000503565 ADH1CP00326 375 aa8.33□□□□□ -1.08
SCLT1-206ENST00000503565 FBXO45P0C2W1 286 aa8.33□□□□□ -1.08
SCLT1-206ENST00000503565 MFAP1P55081 439 aaKnown RBP8.33□□□□□ -1.08
SCLT1-206ENST00000503565 PTK2Q05397 1052 aa8.33□□□□□ -1.08
SCLT1-206ENST00000503565 ARID5BQ14865 1188 aa8.33□□□□□ -1.08
SCLT1-206ENST00000503565 MTMR7Q9Y216 660 aa8.33□□□□□ -1.08
SCLT1-206ENST00000503565 USTQ9Y2C2 406 aa8.33□□□□□ -1.08
SCLT1-206ENST00000503565 NNTQ13423 1086 aa8.32□□□□□ -1.08
SCLT1-206ENST00000503565 MAP4K5Q9Y4K4 846 aa8.32□□□□□ -1.08
SCLT1-206ENST00000503565 WASF2Q9Y6W5 498 aa8.32□□□□□ -1.08
SCLT1-206ENST00000503565 BRD1O95696 1058 aa8.31□□□□□ -1.08
SCLT1-206ENST00000503565 TFIP11Q9UBB9 837 aaKnown RBP8.31□□□□□ -1.08
SCLT1-206ENST00000503565 ZBBXA8MT70 800 aa8.3□□□□□ -1.08
SCLT1-206ENST00000503565 AXIN1O15169 862 aa8.3□□□□□ -1.08
SCLT1-206ENST00000503565 CSB-PGBD3P0DP91 1061 aa8.3□□□□□ -1.08
SCLT1-206ENST00000503565 LMOD1P29536 600 aaPredicted RBP8.3□□□□□ -1.08
SCLT1-206ENST00000503565 KCNA1Q09470 495 aa8.3□□□□□ -1.08
SCLT1-206ENST00000503565 CTC1Q2NKJ3 1217 aa8.3□□□□□ -1.08
SCLT1-206ENST00000503565 ZBTB33Q86T24 672 aa8.3□□□□□ -1.08
SCLT1-206ENST00000503565 TIMP2P16035 220 aa8.28□□□□□ -1.08
SCLT1-206ENST00000503565 FSHRP23945 695 aa8.28□□□□□ -1.08
SCLT1-206ENST00000503565 NR5A1Q13285 461 aa8.28□□□□□ -1.08
SCLT1-206ENST00000503565 VASH1Q7L8A9 365 aaPredicted RBP8.28□□□□□ -1.08
SCLT1-206ENST00000503565 PNMA1Q8ND90 353 aa8.28□□□□□ -1.08
SCLT1-206ENST00000503565 TMEM88BA6NKF7 163 aa8.27□□□□□ -1.09
SCLT1-206ENST00000503565 PATL2C9JE40 543 aaKnown RBP8.27□□□□□ -1.09
SCLT1-206ENST00000503565 SOX11P35716 441 aa8.27□□□□□ -1.09
SCLT1-206ENST00000503565 NR1H3Q13133 447 aa8.27□□□□□ -1.09
SCLT1-206ENST00000503565 CDCA8Q53HL2 280 aa8.27□□□□□ -1.09
SCLT1-206ENST00000503565 FOXD4L5Q5VV16 416 aaPredicted RBP8.27□□□□□ -1.09
SCLT1-206ENST00000503565 FOXD4L4Q8WXT5 416 aaPredicted RBP8.27□□□□□ -1.09
SCLT1-206ENST00000503565 ITPKCQ96DU7 683 aa8.27□□□□□ -1.09
SCLT1-206ENST00000503565 KCTD15Q96SI1 283 aaPredicted RBP8.27□□□□□ -1.09
SCLT1-206ENST00000503565 ZFAND3Q9H8U3 227 aa8.27□□□□□ -1.09
SCLT1-206ENST00000503565 MAFBQ9Y5Q3 323 aaPredicted RBP8.27□□□□□ -1.09
SCLT1-206ENST00000503565 ESPNB1AK53 854 aa8.26□□□□□ -1.09
SCLT1-206ENST00000503565 TBC1D9Q6ZT07 1266 aa8.26□□□□□ -1.09
SCLT1-206ENST00000503565 TRIM46Q7Z4K8 759 aa8.26□□□□□ -1.09
SCLT1-206ENST00000503565 SLC10A4Q96EP9 437 aa8.26□□□□□ -1.09
SCLT1-206ENST00000503565 CAPN5O15484 640 aaPredicted RBP8.25□□□□□ -1.09
SCLT1-206ENST00000503565 ATG7O95352 703 aa8.25□□□□□ -1.09
SCLT1-206ENST00000503565 WDR4P57081 412 aaKnown RBP8.25□□□□□ -1.09
SCLT1-206ENST00000503565 INTS6LQ5JSJ4 861 aaKnown RBP8.25□□□□□ -1.09
SCLT1-206ENST00000503565 ATP13A2Q9NQ11 1180 aa8.25□□□□□ -1.09
SCLT1-206ENST00000503565 ZIC2O95409 532 aaPredicted RBP8.24□□□□□ -1.09
SCLT1-206ENST00000503565 BMP1P13497 986 aa8.24□□□□□ -1.09
SCLT1-206ENST00000503565 SEMA3FQ13275 785 aa8.24□□□□□ -1.09
SCLT1-206ENST00000503565 ZNF428Q96B54 188 aa8.24□□□□□ -1.09
SCLT1-206ENST00000503565 GMPR2Q9P2T1 348 aaKnown RBP8.24□□□□□ -1.09
SCLT1-206ENST00000503565 GIGYF1O75420 1035 aaPredicted RBP8.23□□□□□ -1.09
SCLT1-206ENST00000503565 PPP1R26Q5T8A7 1209 aaPredicted RBP8.23□□□□□ -1.09
SCLT1-206ENST00000503565 DZIP3Q86Y13 1208 aaKnown RBP8.23□□□□□ -1.09
SCLT1-206ENST00000503565 CCDC116Q8IYX3 515 aa8.23□□□□□ -1.09
SCLT1-206ENST00000503565 PCDHB9Q9Y5E1 797 aa8.23□□□□□ -1.09
SCLT1-206ENST00000503565 VRTNQ9H8Y1 702 aa8.22□□□□□ -1.09
SCLT1-206ENST00000503565 TMPRSS4Q9NRS4 437 aa8.22□□□□□ -1.09
SCLT1-206ENST00000503565 CDV3Q9UKY7 258 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms