RNA–Protein interactions for RNA: ENST00000503114.1

TRIM41-203, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 1,904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-203ENST00000503114 TMEM2Q9UHN6 1383 aa24.2■■□□□ 1.47
TRIM41-203ENST00000503114 SMC5Q8IY18 1101 aa24.2■■□□□ 1.46
TRIM41-203ENST00000503114 HMOX1P09601 288 aa24.2■■□□□ 1.46
TRIM41-203ENST00000503114 TBC1D32Q96NH3 1257 aa24.19■■□□□ 1.46
TRIM41-203ENST00000503114 ZRANB1Q9UGI0 708 aa24.19■■□□□ 1.46
TRIM41-203ENST00000503114 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.18■■□□□ 1.46
TRIM41-203ENST00000503114 COG3Q96JB2 828 aa24.18■■□□□ 1.46
TRIM41-203ENST00000503114 IFT57Q9NWB7 429 aa24.18■■□□□ 1.46
TRIM41-203ENST00000503114 PTCH1Q13635 1447 aa24.18■■□□□ 1.46
TRIM41-203ENST00000503114 ADAMTS13Q76LX8 1427 aa24.18■■□□□ 1.46
TRIM41-203ENST00000503114 ZNF853P0CG23 659 aa24.18■■□□□ 1.46
TRIM41-203ENST00000503114 UPF2Q9HAU5 1272 aaKnown RBP24.18■■□□□ 1.46
TRIM41-203ENST00000503114 PIK3R4Q99570 1358 aa24.17■■□□□ 1.46
TRIM41-203ENST00000503114 BECN1Q14457 450 aa24.16■■□□□ 1.46
TRIM41-203ENST00000503114 ZNF692Q9BU19 519 aaPredicted RBP24.16■■□□□ 1.46
TRIM41-203ENST00000503114 PRR36Q9H6K5 1346 aa24.16■■□□□ 1.46
TRIM41-203ENST00000503114 NALCNQ8IZF0 1738 aa24.16■■□□□ 1.46
TRIM41-203ENST00000503114 GNAI1P63096 354 aa24.16■■□□□ 1.46
TRIM41-203ENST00000503114 NCKAP5LQ9HCH0 1330 aa24.16■■□□□ 1.46
TRIM41-203ENST00000503114 ROBO2Q9HCK4 1378 aa24.16■■□□□ 1.46
TRIM41-203ENST00000503114 VAMP4O75379 141 aa24.15■■□□□ 1.46
TRIM41-203ENST00000503114 ARHGAP45Q92619 1136 aa24.15■■□□□ 1.46
TRIM41-203ENST00000503114 LMOD3Q0VAK6 560 aa24.13■■□□□ 1.45
TRIM41-203ENST00000503114 MRPL50Q8N5N7 158 aaKnown RBP24.13■■□□□ 1.45
TRIM41-203ENST00000503114 THUMPD2Q9BTF0 503 aaKnown RBP24.13■■□□□ 1.45
TRIM41-203ENST00000503114 PLEKHG1Q9ULL1 1385 aa24.11■■□□□ 1.45
TRIM41-203ENST00000503114 RRS1Q15050 365 aaKnown RBP24.11■■□□□ 1.45
TRIM41-203ENST00000503114 MBIPQ9NS73 344 aa24.11■■□□□ 1.45
TRIM41-203ENST00000503114 OVOS2A0A0J9YW53 1432 aa24.1■■□□□ 1.45
TRIM41-203ENST00000503114 OVOS2Q6IE36 1432 aa24.1■■□□□ 1.45
TRIM41-203ENST00000503114 RGPD1P0DJD0 1748 aa24.09■■□□□ 1.45
TRIM41-203ENST00000503114 NUCB1Q02818 461 aa24.09■■□□□ 1.45
TRIM41-203ENST00000503114 TSPYL6Q8N831 410 aa24.09■■□□□ 1.45
TRIM41-203ENST00000503114 CFAP44Q96MT7 982 aa24.09■■□□□ 1.45
TRIM41-203ENST00000503114 CHMP4BQ9H444 224 aaKnown RBP24.08■■□□□ 1.45
TRIM41-203ENST00000503114 ABCC4O15439 1325 aa24.07■■□□□ 1.44
TRIM41-203ENST00000503114 PEAK1Q9H792 1746 aa24.07■■□□□ 1.44
TRIM41-203ENST00000503114 ZBTB7BO15156 539 aaPredicted RBP24.06■■□□□ 1.44
TRIM41-203ENST00000503114 GSE1Q14687 1217 aa24.06■■□□□ 1.44
TRIM41-203ENST00000503114 TTC21BQ7Z4L5 1316 aa24.06■■□□□ 1.44
TRIM41-203ENST00000503114 FRAT2O75474 233 aaPredicted RBP24.06■■□□□ 1.44
TRIM41-203ENST00000503114 PLEKHG3A1L390 1219 aa24.05■■□□□ 1.44
TRIM41-203ENST00000503114 USP6P35125 1406 aa24.05■■□□□ 1.44
TRIM41-203ENST00000503114 TWISTNBQ3B726 338 aaPredicted RBP24.04■■□□□ 1.44
TRIM41-203ENST00000503114 ANTXR1Q9H6X2 564 aa24.03■■□□□ 1.44
TRIM41-203ENST00000503114 FMN2Q9NZ56 1722 aa24.03■■□□□ 1.44
TRIM41-203ENST00000503114 TBC1D2Q9BYX2 928 aa24.02■■□□□ 1.44
TRIM41-203ENST00000503114 ACEP12821 1306 aa24.02■■□□□ 1.44
TRIM41-203ENST00000503114 USP31Q70CQ4 1352 aa24.02■■□□□ 1.44
TRIM41-203ENST00000503114 PTPRUQ92729 1446 aa24.02■■□□□ 1.44
TRIM41-203ENST00000503114 LTKP29376 864 aa24.02■■□□□ 1.44
TRIM41-203ENST00000503114 EIF4A2Q14240 407 aaKnown RBP24.02■■□□□ 1.44
TRIM41-203ENST00000503114 SSH2Q76I76 1423 aa24.01■■□□□ 1.43
TRIM41-203ENST00000503114 CHD1LQ86WJ1 897 aa24.01■■□□□ 1.43
TRIM41-203ENST00000503114 C8orf58Q8NAV2 365 aa24.01■■□□□ 1.43
TRIM41-203ENST00000503114 C22orf23Q9BZE7 217 aa24.01■■□□□ 1.43
TRIM41-203ENST00000503114 SLIT1O75093 1534 aa24.01■■□□□ 1.43
TRIM41-203ENST00000503114 GCC1Q96CN9 775 aa24■■□□□ 1.43
TRIM41-203ENST00000503114 KIF24Q5T7B8 1368 aa24■■□□□ 1.43
TRIM41-203ENST00000503114 FAM83GA6ND36 823 aa24■■□□□ 1.43
TRIM41-203ENST00000503114 ARHGAP23Q9P227 1491 aa23.99■■□□□ 1.43
TRIM41-203ENST00000503114 RIMS1Q86UR5 1692 aaKnown RBP23.98■■□□□ 1.43
TRIM41-203ENST00000503114 API5Q9BZZ5 524 aaKnown RBP23.98■■□□□ 1.43
TRIM41-203ENST00000503114 MFAP1P55081 439 aaKnown RBP23.98■■□□□ 1.43
TRIM41-203ENST00000503114 LNPKQ9C0E8 428 aa23.98■■□□□ 1.43
TRIM41-203ENST00000503114 ELL2O00472 640 aaPredicted RBP23.97■■□□□ 1.43
TRIM41-203ENST00000503114 AEBP1Q8IUX7 1158 aa23.97■■□□□ 1.43
TRIM41-203ENST00000503114 DCTN1Q14203 1278 aa23.96■■□□□ 1.43
TRIM41-203ENST00000503114 SULT6B1Q6IMI4 303 aa23.96■■□□□ 1.43
TRIM41-203ENST00000503114 BMP2KLQ5H9B9 411 aa23.95■■□□□ 1.42
TRIM41-203ENST00000503114 SLKQ9H2G2 1235 aaPredicted RBP23.95■■□□□ 1.42
TRIM41-203ENST00000503114 DIP2AQ14689 1571 aa23.95■■□□□ 1.42
TRIM41-203ENST00000503114 FER1L4A9Z1Z3 1794 aa23.94■■□□□ 1.42
TRIM41-203ENST00000503114 SIRT2Q8IXJ6 389 aa23.94■■□□□ 1.42
TRIM41-203ENST00000503114 RGPD8O14715 1765 aaPredicted RBP23.94■■□□□ 1.42
TRIM41-203ENST00000503114 KIAA0232Q92628 1395 aa23.93■■□□□ 1.42
TRIM41-203ENST00000503114 C1orf115Q9H7X2 142 aa23.93■■□□□ 1.42
TRIM41-203ENST00000503114 TTC21AQ8NDW8 1320 aa23.93■■□□□ 1.42
TRIM41-203ENST00000503114 AEBP2Q6ZN18 517 aaPredicted RBP23.92■■□□□ 1.42
TRIM41-203ENST00000503114 ARHGEF10O15013 1369 aa23.92■■□□□ 1.42
TRIM41-203ENST00000503114 RGS12O14924 1447 aa23.92■■□□□ 1.42
TRIM41-203ENST00000503114 CHL1O00533 1208 aa23.92■■□□□ 1.42
TRIM41-203ENST00000503114 RBM25P49756 843 aaKnown RBP23.91■■□□□ 1.42
TRIM41-203ENST00000503114 HAP1P54257 671 aaPredicted RBP23.91■■□□□ 1.42
TRIM41-203ENST00000503114 XRN1Q8IZH2 1706 aaKnown RBP23.9■■□□□ 1.42
TRIM41-203ENST00000503114 ANKRD45Q5TZF3 282 aa23.9■■□□□ 1.42
TRIM41-203ENST00000503114 HSP90AB2PQ58FF8 381 aa23.9■■□□□ 1.42
TRIM41-203ENST00000503114 EID1Q9Y6B2 187 aa23.9■■□□□ 1.42
TRIM41-203ENST00000503114 PIK3C2AO00443 1686 aa23.89■■□□□ 1.42
TRIM41-203ENST00000503114 INTS3Q68E01 1043 aaKnown RBP23.89■■□□□ 1.42
TRIM41-203ENST00000503114 CRB1P82279 1406 aa23.89■■□□□ 1.41
TRIM41-203ENST00000503114 SLC26A8Q96RN1 970 aa23.88■■□□□ 1.41
TRIM41-203ENST00000503114 TBX22Q9Y458 520 aa23.88■■□□□ 1.41
TRIM41-203ENST00000503114 NUTM2FA1L443 756 aa23.88■■□□□ 1.41
TRIM41-203ENST00000503114 AMOTL2Q9Y2J4 779 aa23.87■■□□□ 1.41
TRIM41-203ENST00000503114 USP54Q70EL1 1684 aa23.87■■□□□ 1.41
TRIM41-203ENST00000503114 SBNO1A3KN83 1393 aa23.86■■□□□ 1.41
TRIM41-203ENST00000503114 CEBPAP49715 358 aaPredicted RBP23.86■■□□□ 1.41
TRIM41-203ENST00000503114 FLT4P35916 1363 aa23.85■■□□□ 1.41
TRIM41-203ENST00000503114 MARF1Q9Y4F3 1742 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms