RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ZBTB22O15209 634 aa14.94□□□□□ -0.02
USP46-204ENST00000503060 RARSP54136 660 aaKnown RBP14.94□□□□□ -0.02
USP46-204ENST00000503060 USP6P35125 1406 aa14.93□□□□□ -0.02
USP46-204ENST00000503060 IL13P35225 146 aa14.93□□□□□ -0.02
USP46-204ENST00000503060 RIPK4P57078 832 aa14.93□□□□□ -0.02
USP46-204ENST00000503060 PDE3AQ14432 1141 aa14.93□□□□□ -0.02
USP46-204ENST00000503060 IL16Q14005 1332 aa14.93□□□□□ -0.02
USP46-204ENST00000503060 FANCIQ9NVI1 1328 aa14.93□□□□□ -0.02
USP46-204ENST00000503060 PIK3R4Q99570 1358 aa14.92□□□□□ -0.02
USP46-204ENST00000503060 PRKAR2BP31323 418 aa14.92□□□□□ -0.02
USP46-204ENST00000503060 ADAMTSL3P82987 1691 aa14.91□□□□□ -0.02
USP46-204ENST00000503060 TCERG1O14776 1098 aaKnown RBP14.91□□□□□ -0.02
USP46-204ENST00000503060 RRS1Q15050 365 aaKnown RBP14.91□□□□□ -0.02
USP46-204ENST00000503060 KDM2BQ8NHM5 1336 aa14.91□□□□□ -0.02
USP46-204ENST00000503060 OVOS2A0A0J9YW53 1432 aa14.91□□□□□ -0.02
USP46-204ENST00000503060 OVOS2Q6IE36 1432 aa14.91□□□□□ -0.02
USP46-204ENST00000503060 CANXP27824 592 aaKnown RBP14.91□□□□□ -0.02
USP46-204ENST00000503060 NEFMP07197 916 aa14.9□□□□□ -0.02
USP46-204ENST00000503060 ZNF142P52746 1687 aaPredicted RBP14.9□□□□□ -0.02
USP46-204ENST00000503060 SSH2Q76I76 1423 aa14.9□□□□□ -0.02
USP46-204ENST00000503060 CT47B1P0C2W7 299 aaPredicted RBP14.9□□□□□ -0.02
USP46-204ENST00000503060 TSR2Q969E8 191 aaKnown RBP14.9□□□□□ -0.02
USP46-204ENST00000503060 HMOX1P09601 288 aa14.89□□□□□ -0.03
USP46-204ENST00000503060 KCNA6P17658 529 aa14.89□□□□□ -0.03
USP46-204ENST00000503060 CENPQQ7L2Z9 268 aaPredicted RBP14.89□□□□□ -0.03
USP46-204ENST00000503060 ANKLE2Q86XL3 938 aa14.88□□□□□ -0.03
USP46-204ENST00000503060 FRAT1Q92837 279 aaPredicted RBP14.88□□□□□ -0.03
USP46-204ENST00000503060 NALCNQ8IZF0 1738 aa14.88□□□□□ -0.03
USP46-204ENST00000503060 TTC21AQ8NDW8 1320 aa14.87□□□□□ -0.03
USP46-204ENST00000503060 EXOSC9Q06265 439 aaKnown RBP14.87□□□□□ -0.03
USP46-204ENST00000503060 NFE2L2Q16236 605 aa14.87□□□□□ -0.03
USP46-204ENST00000503060 PMFBP1Q8TBY8 1022 aa14.87□□□□□ -0.03
USP46-204ENST00000503060 PANK1Q8TE04 598 aa14.87□□□□□ -0.03
USP46-204ENST00000503060 PHACTR3Q96KR7 559 aa14.87□□□□□ -0.03
USP46-204ENST00000503060 ANKARQ7Z5J8 1434 aa14.87□□□□□ -0.03
USP46-204ENST00000503060 USP31Q70CQ4 1352 aa14.86□□□□□ -0.03
USP46-204ENST00000503060 MS4A1P11836 297 aa14.86□□□□□ -0.03
USP46-204ENST00000503060 BCL2L13Q9BXK5 485 aa14.86□□□□□ -0.03
USP46-204ENST00000503060 RGPD8O14715 1765 aaPredicted RBP14.86□□□□□ -0.03
USP46-204ENST00000503060 NGDNQ8NEJ9 315 aaKnown RBP14.85□□□□□ -0.03
USP46-204ENST00000503060 COG6Q9Y2V7 657 aa14.85□□□□□ -0.03
USP46-204ENST00000503060 RBM10P98175 930 aaKnown RBP14.85□□□□□ -0.03
USP46-204ENST00000503060 FMN2Q9NZ56 1722 aa14.85□□□□□ -0.03
USP46-204ENST00000503060 CHD2O14647 1828 aaKnown RBP14.84□□□□□ -0.03
USP46-204ENST00000503060 EIF4A2Q14240 407 aaKnown RBP14.83□□□□□ -0.04
USP46-204ENST00000503060 CLUAP1Q96AJ1 413 aa14.83□□□□□ -0.04
USP46-204ENST00000503060 TNNQ9UQP3 1299 aa14.83□□□□□ -0.04
USP46-204ENST00000503060 PEAK1Q9H792 1746 aa14.83□□□□□ -0.04
USP46-204ENST00000503060 SETD1BQ9UPS6 1966 aaKnown RBP14.82□□□□□ -0.04
USP46-204ENST00000503060 RLBP1P12271 317 aa14.82□□□□□ -0.04
USP46-204ENST00000503060 SKAP1Q86WV1 359 aa14.82□□□□□ -0.04
USP46-204ENST00000503060 CALD1Q05682 793 aaKnown RBP14.82□□□□□ -0.04
USP46-204ENST00000503060 MSH5O43196 834 aa14.81□□□□□ -0.04
USP46-204ENST00000503060 ZKSCAN2Q63HK3 967 aa14.81□□□□□ -0.04
USP46-204ENST00000503060 SMC4Q9NTJ3 1288 aa14.81□□□□□ -0.04
USP46-204ENST00000503060 PDE4AP27815 886 aa14.81□□□□□ -0.04
USP46-204ENST00000503060 SSH1Q8WYL5 1049 aa14.81□□□□□ -0.04
USP46-204ENST00000503060 LMOD3Q0VAK6 560 aa14.8□□□□□ -0.04
USP46-204ENST00000503060 TICAM2Q86XR7 235 aa14.8□□□□□ -0.04
USP46-204ENST00000503060 PIK3C2AO00443 1686 aa14.8□□□□□ -0.04
USP46-204ENST00000503060 HSP90AB2PQ58FF8 381 aa14.8□□□□□ -0.04
USP46-204ENST00000503060 THUMPD2Q9BTF0 503 aaKnown RBP14.8□□□□□ -0.04
USP46-204ENST00000503060 AEBP1Q8IUX7 1158 aa14.79□□□□□ -0.04
USP46-204ENST00000503060 BACH2Q9BYV9 841 aa14.79□□□□□ -0.04
USP46-204ENST00000503060 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.79□□□□□ -0.04
USP46-204ENST00000503060 MAP3K19Q56UN5 1328 aa14.79□□□□□ -0.04
USP46-204ENST00000503060 SOX12O15370 315 aa14.78□□□□□ -0.04
USP46-204ENST00000503060 SULT6B1Q6IMI4 303 aa14.78□□□□□ -0.04
USP46-204ENST00000503060 IFT57Q9NWB7 429 aa14.78□□□□□ -0.04
USP46-204ENST00000503060 LAS1LQ9Y4W2 734 aaKnown RBP14.78□□□□□ -0.04
USP46-204ENST00000503060 RGPD1P0DJD0 1748 aa14.78□□□□□ -0.04
USP46-204ENST00000503060 DLG5Q8TDM6 1919 aa14.78□□□□□ -0.04
USP46-204ENST00000503060 IGHDP01880 384 aa14.78□□□□□ -0.04
USP46-204ENST00000503060 GNAI1P63096 354 aa14.78□□□□□ -0.04
USP46-204ENST00000503060 DZIP1LQ8IYY4 767 aaKnown RBP14.78□□□□□ -0.04
USP46-204ENST00000503060 DNAJC5Q9H3Z4 198 aa14.78□□□□□ -0.04
USP46-204ENST00000503060 SBNO1A3KN83 1393 aa14.78□□□□□ -0.04
USP46-204ENST00000503060 NPHP4O75161 1426 aaPredicted RBP14.78□□□□□ -0.04
USP46-204ENST00000503060 ZNF853P0CG23 659 aa14.77□□□□□ -0.04
USP46-204ENST00000503060 MVPQ14764 893 aaKnown RBP14.77□□□□□ -0.05
USP46-204ENST00000503060 ALDH1L2Q3SY69 923 aa14.77□□□□□ -0.05
USP46-204ENST00000503060 FLT4P35916 1363 aa14.77□□□□□ -0.05
USP46-204ENST00000503060 FTSJ3Q8IY81 847 aaKnown RBP14.76□□□□□ -0.05
USP46-204ENST00000503060 BRPF3Q9ULD4 1205 aa14.76□□□□□ -0.05
USP46-204ENST00000503060 NLRP6P59044 892 aa14.76□□□□□ -0.05
USP46-204ENST00000503060 ZNF428Q96B54 188 aa14.76□□□□□ -0.05
USP46-204ENST00000503060 ADGRL3Q9HAR2 1447 aa14.76□□□□□ -0.05
USP46-204ENST00000503060 TRIM27P14373 513 aa14.75□□□□□ -0.05
USP46-204ENST00000503060 ATF7IPQ6VMQ6 1270 aa14.75□□□□□ -0.05
USP46-204ENST00000503060 ARHGEF10O15013 1369 aa14.75□□□□□ -0.05
USP46-204ENST00000503060 USP54Q70EL1 1684 aa14.75□□□□□ -0.05
USP46-204ENST00000503060 KIF16BQ96L93 1317 aa14.75□□□□□ -0.05
USP46-204ENST00000503060 NOB1Q9ULX3 412 aaKnown RBP14.75□□□□□ -0.05
USP46-204ENST00000503060 PHF8Q9UPP1 1060 aa14.75□□□□□ -0.05
USP46-204ENST00000503060 ANP32AP39687 249 aaKnown RBP14.74□□□□□ -0.05
USP46-204ENST00000503060 MBIPQ9NS73 344 aa14.74□□□□□ -0.05
USP46-204ENST00000503060 PCDHB15Q9Y5E8 787 aa14.74□□□□□ -0.05
USP46-204ENST00000503060 MARF1Q9Y4F3 1742 aaKnown RBP14.74□□□□□ -0.05
USP46-204ENST00000503060 FAM83GA6ND36 823 aa14.74□□□□□ -0.05
USP46-204ENST00000503060 RBM33Q96EV2 1170 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms