RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 PATL2C9JE40 543 aaKnown RBP9.58□□□□□ -0.88
RFC1-204ENST00000502706 MAN1A2O60476 641 aa9.58□□□□□ -0.88
RFC1-204ENST00000502706 TMEM151AQ8N4L1 468 aa9.58□□□□□ -0.88
RFC1-204ENST00000502706 PPP1R15AO75807 674 aaPredicted RBP9.57□□□□□ -0.88
RFC1-204ENST00000502706 IRF5Q13568 498 aa9.57□□□□□ -0.88
RFC1-204ENST00000502706 E9PSI1 815 aa9.56□□□□□ -0.88
RFC1-204ENST00000502706 PPFIA3O75145 1194 aa9.56□□□□□ -0.88
RFC1-204ENST00000502706 SKIV2LQ15477 1246 aaKnown RBP9.56□□□□□ -0.88
RFC1-204ENST00000502706 ATP1B4Q9UN42 357 aaPredicted RBP9.56□□□□□ -0.88
RFC1-204ENST00000502706 ACIN1Q9UKV3 1341 aaKnown RBP9.56□□□□□ -0.88
RFC1-204ENST00000502706 RNF225M0QZC1 329 aaPredicted RBP9.55□□□□□ -0.88
RFC1-204ENST00000502706 GDF11O95390 407 aa9.55□□□□□ -0.88
RFC1-204ENST00000502706 FAM174AQ8TBP5 190 aa9.55□□□□□ -0.88
RFC1-204ENST00000502706 RASSF7Q02833 373 aa9.54□□□□□ -0.88
RFC1-204ENST00000502706 ZNF428Q96B54 188 aa9.54□□□□□ -0.88
RFC1-204ENST00000502706 ZNF330Q9Y3S2 320 aaPredicted RBP9.54□□□□□ -0.88
RFC1-204ENST00000502706 DESI1Q6ICB0 168 aa9.53□□□□□ -0.88
RFC1-204ENST00000502706 CDK15Q96Q40 435 aa9.53□□□□□ -0.88
RFC1-204ENST00000502706 SPDYE5A6NIY4 337 aa9.52□□□□□ -0.89
RFC1-204ENST00000502706 ZIC2O95409 532 aaPredicted RBP9.52□□□□□ -0.89
RFC1-204ENST00000502706 C6orf118Q5T5N4 469 aa9.52□□□□□ -0.89
RFC1-204ENST00000502706 PRR7Q8TB68 274 aa9.52□□□□□ -0.89
RFC1-204ENST00000502706 COG6Q9Y2V7 657 aa9.52□□□□□ -0.89
RFC1-204ENST00000502706 HMGB1P09429 215 aaKnown RBP9.51□□□□□ -0.89
RFC1-204ENST00000502706 ZFAND3Q9H8U3 227 aa9.51□□□□□ -0.89
RFC1-204ENST00000502706 UPP2O95045 317 aa9.5□□□□□ -0.89
RFC1-204ENST00000502706 ITPKCQ96DU7 683 aa9.5□□□□□ -0.89
RFC1-204ENST00000502706 BMP2P12643 396 aa9.49□□□□□ -0.89
RFC1-204ENST00000502706 NR5A1Q13285 461 aa9.49□□□□□ -0.89
RFC1-204ENST00000502706 SPIRE2Q8WWL2 714 aa9.49□□□□□ -0.89
RFC1-204ENST00000502706 ADAMTS8Q9UP79 889 aa9.49□□□□□ -0.89
RFC1-204ENST00000502706 MTMR2Q13614 643 aa9.48□□□□□ -0.89
RFC1-204ENST00000502706 ARID5BQ14865 1188 aa9.48□□□□□ -0.89
RFC1-204ENST00000502706 NR3C2P08235 984 aa9.47□□□□□ -0.89
RFC1-204ENST00000502706 KRT76Q01546 638 aa9.47□□□□□ -0.89
RFC1-204ENST00000502706 LINC00528Q8N1L1 170 aa9.47□□□□□ -0.89
RFC1-204ENST00000502706 NDUFV2P19404 249 aa9.46□□□□□ -0.9
RFC1-204ENST00000502706 CTHP32929 405 aa9.46□□□□□ -0.9
RFC1-204ENST00000502706 KCNA1Q09470 495 aa9.46□□□□□ -0.9
RFC1-204ENST00000502706 WWC1Q8IX03 1113 aa9.46□□□□□ -0.9
RFC1-204ENST00000502706 MEIOBQ8N635 442 aa9.46□□□□□ -0.9
RFC1-204ENST00000502706 PROCA1Q8NCQ7 364 aaPredicted RBP9.46□□□□□ -0.9
RFC1-204ENST00000502706 BANK1Q8NDB2 785 aa9.46□□□□□ -0.9
RFC1-204ENST00000502706 DNMT3LQ9UJW3 386 aa9.46□□□□□ -0.9
RFC1-204ENST00000502706 SOS2Q07890 1332 aaPredicted RBP9.46□□□□□ -0.9
RFC1-204ENST00000502706 CUX2O14529 1486 aa9.46□□□□□ -0.9
RFC1-204ENST00000502706 MOXD2PA6NHM9 499 aa9.45□□□□□ -0.9
RFC1-204ENST00000502706 SPTLC1O15269 473 aa9.45□□□□□ -0.9
RFC1-204ENST00000502706 LYPD8Q6UX82 237 aa9.45□□□□□ -0.9
RFC1-204ENST00000502706 FOXJ1Q92949 421 aa9.45□□□□□ -0.9
RFC1-204ENST00000502706 CNTNAP3BQ96NU0 1288 aa9.45□□□□□ -0.9
RFC1-204ENST00000502706 CNTNAP3Q9BZ76 1288 aa9.45□□□□□ -0.9
RFC1-204ENST00000502706 GPR161Q8N6U8 529 aaKnown RBP9.44□□□□□ -0.9
RFC1-204ENST00000502706 CALR3Q96L12 384 aaKnown RBP9.44□□□□□ -0.9
RFC1-204ENST00000502706 ERCC6Q03468 1493 aa9.43□□□□□ -0.9
RFC1-204ENST00000502706 BRD1O95696 1058 aa9.43□□□□□ -0.9
RFC1-204ENST00000502706 SSTR3P32745 418 aaPredicted RBP9.43□□□□□ -0.9
RFC1-204ENST00000502706 GRM5P41594 1212 aa9.43□□□□□ -0.9
RFC1-204ENST00000502706 POLR3EQ9NVU0 708 aa9.43□□□□□ -0.9
RFC1-204ENST00000502706 IGHA1P01876 353 aa9.42□□□□□ -0.9
RFC1-204ENST00000502706 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.42□□□□□ -0.9
RFC1-204ENST00000502706 AMOTL2Q9Y2J4 779 aa9.42□□□□□ -0.9
RFC1-204ENST00000502706 ZNF385CQ66K41 422 aaPredicted RBP9.41□□□□□ -0.9
RFC1-204ENST00000502706 BEGAINQ9BUH8 593 aa9.41□□□□□ -0.9
RFC1-204ENST00000502706 SNRKQ9NRH2 765 aa9.41□□□□□ -0.9
RFC1-204ENST00000502706 DNMT3AQ9Y6K1 912 aaPredicted RBP9.41□□□□□ -0.9
RFC1-204ENST00000502706 AGERQ15109 404 aa9.4□□□□□ -0.9
RFC1-204ENST00000502706 BPHLQ86WA6 291 aaPredicted RBP9.4□□□□□ -0.9
RFC1-204ENST00000502706 SVOPQ8N4V2 548 aa9.4□□□□□ -0.9
RFC1-204ENST00000502706 TSEN34Q9BSV6 310 aaKnown RBP9.4□□□□□ -0.9
RFC1-204ENST00000502706 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.4□□□□□ -0.9
RFC1-204ENST00000502706 COL25A1Q9BXS0 654 aaPredicted RBP9.4□□□□□ -0.9
RFC1-204ENST00000502706 NCAPD3P42695 1498 aa9.4□□□□□ -0.91
RFC1-204ENST00000502706 F12P00748 615 aaPredicted RBP9.39□□□□□ -0.91
RFC1-204ENST00000502706 HSP90B1P14625 803 aaKnown RBP9.39□□□□□ -0.91
RFC1-204ENST00000502706 GJA5P36382 358 aa9.39□□□□□ -0.91
RFC1-204ENST00000502706 C4orf48Q5BLP8 95 aa9.39□□□□□ -0.91
RFC1-204ENST00000502706 GPAT2Q6NUI2 795 aa9.39□□□□□ -0.91
RFC1-204ENST00000502706 NANOS1Q8WY41 292 aaKnown RBP9.39□□□□□ -0.91
RFC1-204ENST00000502706 PTSQ03393 145 aa9.38□□□□□ -0.91
RFC1-204ENST00000502706 TMEM259Q4ZIN3 620 aa9.38□□□□□ -0.91
RFC1-204ENST00000502706 MAP10Q9P2G4 905 aa9.38□□□□□ -0.91
RFC1-204ENST00000502706 USTQ9Y2C2 406 aa9.38□□□□□ -0.91
RFC1-204ENST00000502706 TTLL8A6PVC2 850 aa9.37□□□□□ -0.91
RFC1-204ENST00000502706 RFC5P40937 340 aa9.37□□□□□ -0.91
RFC1-204ENST00000502706 FOXK2Q01167 660 aa9.37□□□□□ -0.91
RFC1-204ENST00000502706 CCDC27Q2M243 656 aa9.37□□□□□ -0.91
RFC1-204ENST00000502706 PRM3Q9NNZ6 103 aa9.37□□□□□ -0.91
RFC1-204ENST00000502706 IRS1P35568 1242 aa9.36□□□□□ -0.91
RFC1-204ENST00000502706 PBXIP1Q96AQ6 731 aa9.36□□□□□ -0.91
RFC1-204ENST00000502706 GDPD2Q9HCC8 539 aa9.36□□□□□ -0.91
RFC1-204ENST00000502706 ATAD2BQ9ULI0 1458 aa9.35□□□□□ -0.91
RFC1-204ENST00000502706 CFAP99D6REC4 459 aa9.35□□□□□ -0.91
RFC1-204ENST00000502706 SLURP2P0DP57 97 aa9.35□□□□□ -0.91
RFC1-204ENST00000502706 CSB-PGBD3P0DP91 1061 aa9.35□□□□□ -0.91
RFC1-204ENST00000502706 CDK11BP21127 795 aaKnown RBP9.35□□□□□ -0.91
RFC1-204ENST00000502706 FSHRP23945 695 aa9.35□□□□□ -0.91
RFC1-204ENST00000502706 CLK2P49760 499 aaKnown RBP9.35□□□□□ -0.91
RFC1-204ENST00000502706 SMARCA2P51531 1590 aa9.35□□□□□ -0.91
RFC1-204ENST00000502706 MYSM1Q5VVJ2 828 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms