RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 ZBTB40Q9NUA8 1239 aa21.03■□□□□ 0.96
VCAN-204ENST00000502527 ROBO2Q9HCK4 1378 aa21.02■□□□□ 0.96
VCAN-204ENST00000502527 UBR1Q8IWV7 1749 aa21.02■□□□□ 0.96
VCAN-204ENST00000502527 BCL11AQ9H165 835 aa21.01■□□□□ 0.95
VCAN-204ENST00000502527 PRR36Q9H6K5 1346 aa21.01■□□□□ 0.95
VCAN-204ENST00000502527 ADAMTS13Q76LX8 1427 aa21.01■□□□□ 0.95
VCAN-204ENST00000502527 RRS1Q15050 365 aaKnown RBP21■□□□□ 0.95
VCAN-204ENST00000502527 C3P01024 1663 aa21■□□□□ 0.95
VCAN-204ENST00000502527 AKAP12Q02952 1782 aa21■□□□□ 0.95
VCAN-204ENST00000502527 PLEKHG1Q9ULL1 1385 aa21■□□□□ 0.95
VCAN-204ENST00000502527 ZNF853P0CG23 659 aa20.99■□□□□ 0.95
VCAN-204ENST00000502527 ITSN1Q15811 1721 aa20.99■□□□□ 0.95
VCAN-204ENST00000502527 VAMP4O75379 141 aa20.98■□□□□ 0.95
VCAN-204ENST00000502527 BECN1Q14457 450 aa20.98■□□□□ 0.95
VCAN-204ENST00000502527 SMC5Q8IY18 1101 aa20.98■□□□□ 0.95
VCAN-204ENST00000502527 ARHGAP45Q92619 1136 aa20.98■□□□□ 0.95
VCAN-204ENST00000502527 THUMPD2Q9BTF0 503 aaKnown RBP20.98■□□□□ 0.95
VCAN-204ENST00000502527 CHMP4BQ9H444 224 aaKnown RBP20.98■□□□□ 0.95
VCAN-204ENST00000502527 NFKBIBQ15653 356 aa20.98■□□□□ 0.95
VCAN-204ENST00000502527 TTC21BQ7Z4L5 1316 aa20.96■□□□□ 0.95
VCAN-204ENST00000502527 PLEKHG3A1L390 1219 aa20.96■□□□□ 0.95
VCAN-204ENST00000502527 MRPL50Q8N5N7 158 aaKnown RBP20.96■□□□□ 0.95
VCAN-204ENST00000502527 CFAP44Q96MT7 982 aa20.96■□□□□ 0.95
VCAN-204ENST00000502527 MBIPQ9NS73 344 aa20.96■□□□□ 0.95
VCAN-204ENST00000502527 TBC1D32Q96NH3 1257 aa20.95■□□□□ 0.94
VCAN-204ENST00000502527 LTKP29376 864 aa20.95■□□□□ 0.94
VCAN-204ENST00000502527 ACEP12821 1306 aa20.94■□□□□ 0.94
VCAN-204ENST00000502527 TSPYL6Q8N831 410 aa20.93■□□□□ 0.94
VCAN-204ENST00000502527 PTCH1Q13635 1447 aa20.93■□□□□ 0.94
VCAN-204ENST00000502527 PIK3R4Q99570 1358 aa20.93■□□□□ 0.94
VCAN-204ENST00000502527 TWISTNBQ3B726 338 aaPredicted RBP20.92■□□□□ 0.94
VCAN-204ENST00000502527 EID1Q9Y6B2 187 aa20.92■□□□□ 0.94
VCAN-204ENST00000502527 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.91■□□□□ 0.94
VCAN-204ENST00000502527 NRKQ7Z2Y5 1582 aa20.91■□□□□ 0.94
VCAN-204ENST00000502527 NUCB1Q02818 461 aa20.91■□□□□ 0.94
VCAN-204ENST00000502527 ZBTB7BO15156 539 aaPredicted RBP20.9■□□□□ 0.94
VCAN-204ENST00000502527 EIF4A2Q14240 407 aaKnown RBP20.9■□□□□ 0.94
VCAN-204ENST00000502527 TOPAZ1Q8N9V7 1692 aa20.9■□□□□ 0.94
VCAN-204ENST00000502527 OVOS2A0A0J9YW53 1432 aa20.9■□□□□ 0.94
VCAN-204ENST00000502527 USP6P35125 1406 aa20.9■□□□□ 0.94
VCAN-204ENST00000502527 OVOS2Q6IE36 1432 aa20.9■□□□□ 0.94
VCAN-204ENST00000502527 ELL2O00472 640 aaPredicted RBP20.89■□□□□ 0.93
VCAN-204ENST00000502527 SULT6B1Q6IMI4 303 aa20.88■□□□□ 0.93
VCAN-204ENST00000502527 C8orf58Q8NAV2 365 aa20.88■□□□□ 0.93
VCAN-204ENST00000502527 ABCC4O15439 1325 aa20.88■□□□□ 0.93
VCAN-204ENST00000502527 FAM83GA6ND36 823 aa20.87■□□□□ 0.93
VCAN-204ENST00000502527 SLC26A8Q96RN1 970 aa20.87■□□□□ 0.93
VCAN-204ENST00000502527 API5Q9BZZ5 524 aaKnown RBP20.87■□□□□ 0.93
VCAN-204ENST00000502527 PTPRUQ92729 1446 aa20.87■□□□□ 0.93
VCAN-204ENST00000502527 NUTM2FA1L443 756 aa20.86■□□□□ 0.93
VCAN-204ENST00000502527 CEBPAP49715 358 aaPredicted RBP20.86■□□□□ 0.93
VCAN-204ENST00000502527 GCC1Q96CN9 775 aa20.86■□□□□ 0.93
VCAN-204ENST00000502527 USP31Q70CQ4 1352 aa20.86■□□□□ 0.93
VCAN-204ENST00000502527 HAP1P54257 671 aaPredicted RBP20.85■□□□□ 0.93
VCAN-204ENST00000502527 CHD1LQ86WJ1 897 aa20.85■□□□□ 0.93
VCAN-204ENST00000502527 AEBP1Q8IUX7 1158 aa20.85■□□□□ 0.93
VCAN-204ENST00000502527 DLG5Q8TDM6 1919 aa20.85■□□□□ 0.93
VCAN-204ENST00000502527 DCTN1Q14203 1278 aa20.85■□□□□ 0.93
VCAN-204ENST00000502527 AMOTL2Q9Y2J4 779 aa20.85■□□□□ 0.93
VCAN-204ENST00000502527 TBX22Q9Y458 520 aa20.85■□□□□ 0.93
VCAN-204ENST00000502527 TTC21AQ8NDW8 1320 aa20.84■□□□□ 0.93
VCAN-204ENST00000502527 SLIT1O75093 1534 aa20.84■□□□□ 0.93
VCAN-204ENST00000502527 SSH2Q76I76 1423 aa20.84■□□□□ 0.93
VCAN-204ENST00000502527 C22orf23Q9BZE7 217 aa20.84■□□□□ 0.93
VCAN-204ENST00000502527 ARHGAP23Q9P227 1491 aa20.83■□□□□ 0.93
VCAN-204ENST00000502527 LNPKQ9C0E8 428 aa20.83■□□□□ 0.93
VCAN-204ENST00000502527 KIF24Q5T7B8 1368 aa20.83■□□□□ 0.92
VCAN-204ENST00000502527 HSP90AB2PQ58FF8 381 aa20.82■□□□□ 0.92
VCAN-204ENST00000502527 FRAT2O75474 233 aaPredicted RBP20.82■□□□□ 0.92
VCAN-204ENST00000502527 MFAP1P55081 439 aaKnown RBP20.82■□□□□ 0.92
VCAN-204ENST00000502527 GSE1Q14687 1217 aa20.82■□□□□ 0.92
VCAN-204ENST00000502527 NALCNQ8IZF0 1738 aa20.81■□□□□ 0.92
VCAN-204ENST00000502527 TBC1D2Q9BYX2 928 aa20.81■□□□□ 0.92
VCAN-204ENST00000502527 CHL1O00533 1208 aa20.81■□□□□ 0.92
VCAN-204ENST00000502527 ANKRD45Q5TZF3 282 aa20.79■□□□□ 0.92
VCAN-204ENST00000502527 THEMISQ8N1K5 641 aaPredicted RBP20.79■□□□□ 0.92
VCAN-204ENST00000502527 C1orf115Q9H7X2 142 aa20.79■□□□□ 0.92
VCAN-204ENST00000502527 ARHGEF10O15013 1369 aa20.79■□□□□ 0.92
VCAN-204ENST00000502527 KIAA0232Q92628 1395 aa20.79■□□□□ 0.92
VCAN-204ENST00000502527 BMP2KLQ5H9B9 411 aa20.78■□□□□ 0.92
VCAN-204ENST00000502527 PEAK1Q9H792 1746 aa20.78■□□□□ 0.92
VCAN-204ENST00000502527 NGDNQ8NEJ9 315 aaKnown RBP20.77■□□□□ 0.92
VCAN-204ENST00000502527 SLKQ9H2G2 1235 aaPredicted RBP20.77■□□□□ 0.92
VCAN-204ENST00000502527 ANTXR1Q9H6X2 564 aa20.77■□□□□ 0.92
VCAN-204ENST00000502527 MAP3K19Q56UN5 1328 aa20.77■□□□□ 0.91
VCAN-204ENST00000502527 RGPD1P0DJD0 1748 aa20.76■□□□□ 0.91
VCAN-204ENST00000502527 MCM10Q7L590 875 aa20.76■□□□□ 0.91
VCAN-204ENST00000502527 SIRT2Q8IXJ6 389 aa20.76■□□□□ 0.91
VCAN-204ENST00000502527 DIP2AQ14689 1571 aa20.76■□□□□ 0.91
VCAN-204ENST00000502527 SBNO1A3KN83 1393 aa20.76■□□□□ 0.91
VCAN-204ENST00000502527 SOX12O15370 315 aa20.76■□□□□ 0.91
VCAN-204ENST00000502527 INTS3Q68E01 1043 aaKnown RBP20.76■□□□□ 0.91
VCAN-204ENST00000502527 FLT4P35916 1363 aa20.75■□□□□ 0.91
VCAN-204ENST00000502527 CRB1P82279 1406 aa20.73■□□□□ 0.91
VCAN-204ENST00000502527 PTPRCP08575 1304 aa20.72■□□□□ 0.91
VCAN-204ENST00000502527 PLPPR3Q6T4P5 718 aa20.72■□□□□ 0.91
VCAN-204ENST00000502527 AMPHP49418 695 aa20.71■□□□□ 0.91
VCAN-204ENST00000502527 RBM25P49756 843 aaKnown RBP20.71■□□□□ 0.91
VCAN-204ENST00000502527 KRT24Q2M2I5 525 aa20.71■□□□□ 0.91
VCAN-204ENST00000502527 RTF1Q92541 710 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms