RNA–Protein interactions for RNA: ENST00000498402.2

LRRC41-205, Transcript of leucine rich repeat containing 41, humanhuman

TSL 2

Gene LRRC41, Length 2,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-205ENST00000498402 PTCH1Q13635 1447 aa22.43■■□□□ 1.18
LRRC41-205ENST00000498402 OVOS2Q6IE36 1432 aa22.43■■□□□ 1.18
LRRC41-205ENST00000498402 DIP2AQ14689 1571 aa22.43■■□□□ 1.18
LRRC41-205ENST00000498402 NUTM2FA1L443 756 aa22.43■■□□□ 1.18
LRRC41-205ENST00000498402 ATF7IPQ6VMQ6 1270 aa22.43■■□□□ 1.18
LRRC41-205ENST00000498402 NOB1Q9ULX3 412 aaKnown RBP22.43■■□□□ 1.18
LRRC41-205ENST00000498402 ALDH1L2Q3SY69 923 aa22.42■■□□□ 1.18
LRRC41-205ENST00000498402 DLG5Q8TDM6 1919 aa22.42■■□□□ 1.18
LRRC41-205ENST00000498402 RWDD1Q9H446 243 aaPredicted RBP22.42■■□□□ 1.18
LRRC41-205ENST00000498402 NALCNQ8IZF0 1738 aa22.41■■□□□ 1.18
LRRC41-205ENST00000498402 VIRMAQ69YN4 1812 aaKnown RBP22.41■■□□□ 1.18
LRRC41-205ENST00000498402 KIF16BQ96L93 1317 aa22.4■■□□□ 1.18
LRRC41-205ENST00000498402 LAS1LQ9Y4W2 734 aaKnown RBP22.4■■□□□ 1.18
LRRC41-205ENST00000498402 SSH2Q76I76 1423 aa22.4■■□□□ 1.18
LRRC41-205ENST00000498402 ZNF428Q96B54 188 aa22.4■■□□□ 1.18
LRRC41-205ENST00000498402 DDRGK1Q96HY6 314 aa22.4■■□□□ 1.18
LRRC41-205ENST00000498402 THUMPD2Q9BTF0 503 aaKnown RBP22.4■■□□□ 1.18
LRRC41-205ENST00000498402 IFT57Q9NWB7 429 aa22.39■■□□□ 1.17
LRRC41-205ENST00000498402 IPO8O15397 1037 aaKnown RBP22.38■■□□□ 1.17
LRRC41-205ENST00000498402 DDX19BQ9UMR2 479 aa22.38■■□□□ 1.17
LRRC41-205ENST00000498402 ZNF853P0CG23 659 aa22.38■■□□□ 1.17
LRRC41-205ENST00000498402 GNAI1P63096 354 aa22.38■■□□□ 1.17
LRRC41-205ENST00000498402 LMOD3Q0VAK6 560 aa22.38■■□□□ 1.17
LRRC41-205ENST00000498402 USP31Q70CQ4 1352 aa22.37■■□□□ 1.17
LRRC41-205ENST00000498402 BRPF1P55201 1214 aaPredicted RBP22.37■■□□□ 1.17
LRRC41-205ENST00000498402 XRN1Q8IZH2 1706 aaKnown RBP22.37■■□□□ 1.17
LRRC41-205ENST00000498402 EIF4A2Q14240 407 aaKnown RBP22.37■■□□□ 1.17
LRRC41-205ENST00000498402 ITPRIPQ8IWB1 547 aa22.36■■□□□ 1.17
LRRC41-205ENST00000498402 PEAK1Q9H792 1746 aa22.36■■□□□ 1.17
LRRC41-205ENST00000498402 PDZRN3Q9UPQ7 1066 aa22.35■■□□□ 1.17
LRRC41-205ENST00000498402 VAMP4O75379 141 aa22.35■■□□□ 1.17
LRRC41-205ENST00000498402 TMEM57Q8N5G2 664 aa22.35■■□□□ 1.17
LRRC41-205ENST00000498402 RGPD8O14715 1765 aaPredicted RBP22.35■■□□□ 1.17
LRRC41-205ENST00000498402 TTC21AQ8NDW8 1320 aa22.34■■□□□ 1.17
LRRC41-205ENST00000498402 MBIPQ9NS73 344 aa22.34■■□□□ 1.17
LRRC41-205ENST00000498402 RIMS1Q86UR5 1692 aaKnown RBP22.33■■□□□ 1.17
LRRC41-205ENST00000498402 CFAP44Q96MT7 982 aa22.32■■□□□ 1.16
LRRC41-205ENST00000498402 RGPD1P0DJD0 1748 aa22.32■■□□□ 1.16
LRRC41-205ENST00000498402 HDAC1Q13547 482 aaPredicted RBP22.32■■□□□ 1.16
LRRC41-205ENST00000498402 AEBP1Q8IUX7 1158 aa22.32■■□□□ 1.16
LRRC41-205ENST00000498402 TRHP20396 242 aaPredicted RBP22.31■■□□□ 1.16
LRRC41-205ENST00000498402 SULT6B1Q6IMI4 303 aa22.31■■□□□ 1.16
LRRC41-205ENST00000498402 TSPYL6Q8N831 410 aa22.31■■□□□ 1.16
LRRC41-205ENST00000498402 CEP170BQ9Y4F5 1589 aaPredicted RBP22.31■■□□□ 1.16
LRRC41-205ENST00000498402 MRPL50Q8N5N7 158 aaKnown RBP22.3■■□□□ 1.16
LRRC41-205ENST00000498402 ZBTB40Q9NUA8 1239 aa22.3■■□□□ 1.16
LRRC41-205ENST00000498402 FAM83GA6ND36 823 aa22.3■■□□□ 1.16
LRRC41-205ENST00000498402 NBR1Q14596 966 aa22.29■■□□□ 1.16
LRRC41-205ENST00000498402 HSP90AB2PQ58FF8 381 aa22.29■■□□□ 1.16
LRRC41-205ENST00000498402 ARHGAP45Q92619 1136 aa22.29■■□□□ 1.16
LRRC41-205ENST00000498402 PIK3R4Q99570 1358 aa22.28■■□□□ 1.16
LRRC41-205ENST00000498402 NGDNQ8NEJ9 315 aaKnown RBP22.28■■□□□ 1.16
LRRC41-205ENST00000498402 ANKARQ7Z5J8 1434 aa22.28■■□□□ 1.16
LRRC41-205ENST00000498402 FMN2Q9NZ56 1722 aa22.28■■□□□ 1.16
LRRC41-205ENST00000498402 DCTN1Q14203 1278 aa22.27■■□□□ 1.16
LRRC41-205ENST00000498402 TWISTNBQ3B726 338 aaPredicted RBP22.27■■□□□ 1.16
LRRC41-205ENST00000498402 KCNA6P17658 529 aa22.26■■□□□ 1.15
LRRC41-205ENST00000498402 C8orf58Q8NAV2 365 aa22.26■■□□□ 1.15
LRRC41-205ENST00000498402 MAP3K19Q56UN5 1328 aa22.26■■□□□ 1.15
LRRC41-205ENST00000498402 PIK3C2AO00443 1686 aa22.25■■□□□ 1.15
LRRC41-205ENST00000498402 SOX12O15370 315 aa22.25■■□□□ 1.15
LRRC41-205ENST00000498402 USP19O94966 1318 aa22.24■■□□□ 1.15
LRRC41-205ENST00000498402 ELL2O00472 640 aaPredicted RBP22.24■■□□□ 1.15
LRRC41-205ENST00000498402 SBNO1A3KN83 1393 aa22.24■■□□□ 1.15
LRRC41-205ENST00000498402 ARHGEF10O15013 1369 aa22.24■■□□□ 1.15
LRRC41-205ENST00000498402 SMC5Q8IY18 1101 aa22.23■■□□□ 1.15
LRRC41-205ENST00000498402 SEC24BO95487 1268 aa22.22■■□□□ 1.15
LRRC41-205ENST00000498402 FLT4P35916 1363 aa22.22■■□□□ 1.15
LRRC41-205ENST00000498402 ABCC4O15439 1325 aa22.2■■□□□ 1.14
LRRC41-205ENST00000498402 ZBTB7BO15156 539 aaPredicted RBP22.2■■□□□ 1.14
LRRC41-205ENST00000498402 CHMP4BQ9H444 224 aaKnown RBP22.2■■□□□ 1.14
LRRC41-205ENST00000498402 CHD2O14647 1828 aaKnown RBP22.19■■□□□ 1.14
LRRC41-205ENST00000498402 CHL1O00533 1208 aa22.19■■□□□ 1.14
LRRC41-205ENST00000498402 SLC4A3P48751 1232 aa22.18■■□□□ 1.14
LRRC41-205ENST00000498402 DAXXQ9UER7 740 aaPredicted RBP22.18■■□□□ 1.14
LRRC41-205ENST00000498402 MARF1Q9Y4F3 1742 aaKnown RBP22.18■■□□□ 1.14
LRRC41-205ENST00000498402 USP54Q70EL1 1684 aa22.18■■□□□ 1.14
LRRC41-205ENST00000498402 MCM10Q7L590 875 aa22.18■■□□□ 1.14
LRRC41-205ENST00000498402 ZNF142P52746 1687 aaPredicted RBP22.17■■□□□ 1.14
LRRC41-205ENST00000498402 AMPHP49418 695 aa22.17■■□□□ 1.14
LRRC41-205ENST00000498402 KDRP35968 1356 aa22.16■■□□□ 1.14
LRRC41-205ENST00000498402 NLRP6P59044 892 aa22.16■■□□□ 1.14
LRRC41-205ENST00000498402 ANKLE2Q86XL3 938 aa22.16■■□□□ 1.14
LRRC41-205ENST00000498402 API5Q9BZZ5 524 aaKnown RBP22.16■■□□□ 1.14
LRRC41-205ENST00000498402 CRB1P82279 1406 aa22.16■■□□□ 1.14
LRRC41-205ENST00000498402 IGSF1Q8N6C5 1336 aa22.15■■□□□ 1.14
LRRC41-205ENST00000498402 KIAA0232Q92628 1395 aa22.15■■□□□ 1.14
LRRC41-205ENST00000498402 RTL5Q5HYW3 569 aaPredicted RBP22.15■■□□□ 1.14
LRRC41-205ENST00000498402 HAP1P54257 671 aaPredicted RBP22.14■■□□□ 1.13
LRRC41-205ENST00000498402 NUCB1Q02818 461 aa22.14■■□□□ 1.13
LRRC41-205ENST00000498402 EYA1Q99502 592 aa22.14■■□□□ 1.13
LRRC41-205ENST00000498402 KIF24Q5T7B8 1368 aa22.13■■□□□ 1.13
LRRC41-205ENST00000498402 MTHFSDQ2M296 383 aaKnown RBP22.13■■□□□ 1.13
LRRC41-205ENST00000498402 KRT24Q2M2I5 525 aa22.11■■□□□ 1.13
LRRC41-205ENST00000498402 ADAMTSL3P82987 1691 aa22.11■■□□□ 1.13
LRRC41-205ENST00000498402 FOXO3O43524 673 aa22.11■■□□□ 1.13
LRRC41-205ENST00000498402 UPF2Q9HAU5 1272 aaKnown RBP22.11■■□□□ 1.13
LRRC41-205ENST00000498402 HOXC9P31274 260 aa22.1■■□□□ 1.13
LRRC41-205ENST00000498402 NUTM2GQ5VZR2 741 aa22.1■■□□□ 1.13
LRRC41-205ENST00000498402 ABTB2Q8N961 1025 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms