RNA–Protein interactions for RNA: ENST00000497289.5

RPN1-207, Transcript of ribophorin I, humanhuman

TSL 2 BASIC

Gene RPN1, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-207ENST00000497289 NFE2L2Q16236 605 aa20.54■□□□□ 0.88
RPN1-207ENST00000497289 KIF24Q5T7B8 1368 aa20.54■□□□□ 0.88
RPN1-207ENST00000497289 NCOA3Q9Y6Q9 1424 aa20.54■□□□□ 0.88
RPN1-207ENST00000497289 HSPA2P54652 639 aa20.53■□□□□ 0.88
RPN1-207ENST00000497289 TRPM3Q9HCF6 1732 aaPredicted RBP20.53■□□□□ 0.88
RPN1-207ENST00000497289 PSME1Q06323 249 aa20.53■□□□□ 0.88
RPN1-207ENST00000497289 C19orf44Q9H6X5 657 aa20.53■□□□□ 0.88
RPN1-207ENST00000497289 DCCP43146 1447 aa20.52■□□□□ 0.88
RPN1-207ENST00000497289 HSP90AB2PQ58FF8 381 aa20.52■□□□□ 0.88
RPN1-207ENST00000497289 PHACTR3Q96KR7 559 aa20.51■□□□□ 0.87
RPN1-207ENST00000497289 C1orf167Q5SNV9 1468 aa20.51■□□□□ 0.87
RPN1-207ENST00000497289 AMPHP49418 695 aa20.51■□□□□ 0.87
RPN1-207ENST00000497289 CRBNQ96SW2 442 aa20.51■□□□□ 0.87
RPN1-207ENST00000497289 FANCIQ9NVI1 1328 aa20.51■□□□□ 0.87
RPN1-207ENST00000497289 ARHGEF10O15013 1369 aa20.51■□□□□ 0.87
RPN1-207ENST00000497289 TMEM94Q12767 1356 aa20.5■□□□□ 0.87
RPN1-207ENST00000497289 NUTM2GQ5VZR2 741 aa20.5■□□□□ 0.87
RPN1-207ENST00000497289 BCAR3O75815 825 aa20.49■□□□□ 0.87
RPN1-207ENST00000497289 XIRP1Q702N8 1843 aaKnown RBP20.49■□□□□ 0.87
RPN1-207ENST00000497289 NFAT5O94916 1531 aa20.49■□□□□ 0.87
RPN1-207ENST00000497289 RTL1A6NKG5 1358 aa20.49■□□□□ 0.87
RPN1-207ENST00000497289 CT47B1P0C2W7 299 aaPredicted RBP20.48■□□□□ 0.87
RPN1-207ENST00000497289 LMOD3Q0VAK6 560 aa20.48■□□□□ 0.87
RPN1-207ENST00000497289 ORAI2Q96SN7 254 aa20.48■□□□□ 0.87
RPN1-207ENST00000497289 PHRF1Q9P1Y6 1649 aaKnown RBP20.48■□□□□ 0.87
RPN1-207ENST00000497289 CALD1Q05682 793 aaKnown RBP20.48■□□□□ 0.87
RPN1-207ENST00000497289 C20orf194Q5TEA3 1177 aa20.48■□□□□ 0.87
RPN1-207ENST00000497289 SULT6B1Q6IMI4 303 aa20.48■□□□□ 0.87
RPN1-207ENST00000497289 MST1RQ04912 1400 aa20.47■□□□□ 0.87
RPN1-207ENST00000497289 TSR2Q969E8 191 aaKnown RBP20.47■□□□□ 0.87
RPN1-207ENST00000497289 ATF3P18847 181 aa20.46■□□□□ 0.87
RPN1-207ENST00000497289 RARSP54136 660 aaKnown RBP20.46■□□□□ 0.87
RPN1-207ENST00000497289 AEBP1Q8IUX7 1158 aa20.46■□□□□ 0.87
RPN1-207ENST00000497289 HOXC9P31274 260 aa20.45■□□□□ 0.86
RPN1-207ENST00000497289 SLIT3O75094 1523 aa20.45■□□□□ 0.86
RPN1-207ENST00000497289 ALS2Q96Q42 1657 aa20.44■□□□□ 0.86
RPN1-207ENST00000497289 FOXO3O43524 673 aa20.44■□□□□ 0.86
RPN1-207ENST00000497289 CANXP27824 592 aaKnown RBP20.44■□□□□ 0.86
RPN1-207ENST00000497289 TSHZ2Q9NRE2 1034 aa20.44■□□□□ 0.86
RPN1-207ENST00000497289 KCNH5Q8NCM2 988 aa20.43■□□□□ 0.86
RPN1-207ENST00000497289 IGSF1Q8N6C5 1336 aa20.43■□□□□ 0.86
RPN1-207ENST00000497289 KDRP35968 1356 aa20.42■□□□□ 0.86
RPN1-207ENST00000497289 EXOSC9Q06265 439 aaKnown RBP20.42■□□□□ 0.86
RPN1-207ENST00000497289 PDE3AQ14432 1141 aa20.41■□□□□ 0.86
RPN1-207ENST00000497289 MSH6P52701 1360 aa20.41■□□□□ 0.86
RPN1-207ENST00000497289 GNAI1P63096 354 aa20.4■□□□□ 0.86
RPN1-207ENST00000497289 KRT28Q7Z3Y7 464 aa20.4■□□□□ 0.86
RPN1-207ENST00000497289 IFT57Q9NWB7 429 aa20.4■□□□□ 0.86
RPN1-207ENST00000497289 CADPS2Q86UW7 1296 aa20.39■□□□□ 0.86
RPN1-207ENST00000497289 XPCQ01831 940 aaPredicted RBP20.39■□□□□ 0.85
RPN1-207ENST00000497289 EYA1Q99502 592 aa20.39■□□□□ 0.85
RPN1-207ENST00000497289 FRAT1Q92837 279 aaPredicted RBP20.38■□□□□ 0.85
RPN1-207ENST00000497289 THUMPD2Q9BTF0 503 aaKnown RBP20.38■□□□□ 0.85
RPN1-207ENST00000497289 LAS1LQ9Y4W2 734 aaKnown RBP20.38■□□□□ 0.85
RPN1-207ENST00000497289 IP6K1Q92551 441 aa20.37■□□□□ 0.85
RPN1-207ENST00000497289 USP19O94966 1318 aa20.36■□□□□ 0.85
RPN1-207ENST00000497289 ZNF853P0CG23 659 aa20.36■□□□□ 0.85
RPN1-207ENST00000497289 BCL2L13Q9BXK5 485 aa20.36■□□□□ 0.85
RPN1-207ENST00000497289 RGPD2P0DJD1 1756 aa20.35■□□□□ 0.85
RPN1-207ENST00000497289 FAM83GA6ND36 823 aa20.35■□□□□ 0.85
RPN1-207ENST00000497289 CFAP44Q96MT7 982 aa20.35■□□□□ 0.85
RPN1-207ENST00000497289 LMOD2Q6P5Q4 547 aa20.34■□□□□ 0.85
RPN1-207ENST00000497289 SMC4Q9NTJ3 1288 aa20.34■□□□□ 0.85
RPN1-207ENST00000497289 ZNF428Q96B54 188 aa20.33■□□□□ 0.85
RPN1-207ENST00000497289 MBIPQ9NS73 344 aa20.33■□□□□ 0.84
RPN1-207ENST00000497289 GCP02774 474 aa20.32■□□□□ 0.84
RPN1-207ENST00000497289 GAS2L2Q8NHY3 880 aa20.32■□□□□ 0.84
RPN1-207ENST00000497289 LTV1Q96GA3 475 aaPredicted RBP20.32■□□□□ 0.84
RPN1-207ENST00000497289 LRRC37A3O60309 1634 aa20.32■□□□□ 0.84
RPN1-207ENST00000497289 MED1Q15648 1581 aaPredicted RBP20.32■□□□□ 0.84
RPN1-207ENST00000497289 NPHP3Q7Z494 1330 aa20.32■□□□□ 0.84
RPN1-207ENST00000497289 ALDH1L2Q3SY69 923 aa20.32■□□□□ 0.84
RPN1-207ENST00000497289 ZKSCAN2Q63HK3 967 aa20.32■□□□□ 0.84
RPN1-207ENST00000497289 MS4A1P11836 297 aa20.31■□□□□ 0.84
RPN1-207ENST00000497289 DCTN1Q14203 1278 aa20.31■□□□□ 0.84
RPN1-207ENST00000497289 PANK1Q8TE04 598 aa20.31■□□□□ 0.84
RPN1-207ENST00000497289 SSH1Q8WYL5 1049 aa20.31■□□□□ 0.84
RPN1-207ENST00000497289 ZBTB7CA1YPR0 619 aa20.3■□□□□ 0.84
RPN1-207ENST00000497289 MTHFSDQ2M296 383 aaKnown RBP20.3■□□□□ 0.84
RPN1-207ENST00000497289 RGPD5Q99666 1765 aa20.3■□□□□ 0.84
RPN1-207ENST00000497289 CAMTA1Q9Y6Y1 1673 aa20.3■□□□□ 0.84
RPN1-207ENST00000497289 PXDNQ92626 1479 aa20.3■□□□□ 0.84
RPN1-207ENST00000497289 ARHGEF25Q86VW2 580 aa20.3■□□□□ 0.84
RPN1-207ENST00000497289 CRYBG1Q9Y4K1 1723 aa20.3■□□□□ 0.84
RPN1-207ENST00000497289 COG6Q9Y2V7 657 aa20.29■□□□□ 0.84
RPN1-207ENST00000497289 KIF16BQ96L93 1317 aa20.29■□□□□ 0.84
RPN1-207ENST00000497289 ZNF335Q9H4Z2 1342 aaPredicted RBP20.29■□□□□ 0.84
RPN1-207ENST00000497289 TNS3Q68CZ2 1445 aa20.29■□□□□ 0.84
RPN1-207ENST00000497289 AAMPQ13685 434 aa20.28■□□□□ 0.84
RPN1-207ENST00000497289 RTF1Q92541 710 aaKnown RBP20.28■□□□□ 0.84
RPN1-207ENST00000497289 MCM10Q7L590 875 aa20.27■□□□□ 0.84
RPN1-207ENST00000497289 CRB1P82279 1406 aa20.27■□□□□ 0.84
RPN1-207ENST00000497289 KDM2BQ8NHM5 1336 aa20.27■□□□□ 0.83
RPN1-207ENST00000497289 CENPQQ7L2Z9 268 aaPredicted RBP20.26■□□□□ 0.83
RPN1-207ENST00000497289 HTATSF1O43719 755 aaKnown RBP20.26■□□□□ 0.83
RPN1-207ENST00000497289 VAMP4O75379 141 aa20.26■□□□□ 0.83
RPN1-207ENST00000497289 FTSJ3Q8IY81 847 aaKnown RBP20.26■□□□□ 0.83
RPN1-207ENST00000497289 DZIP1LQ8IYY4 767 aaKnown RBP20.26■□□□□ 0.83
RPN1-207ENST00000497289 TNNQ9UQP3 1299 aa20.26■□□□□ 0.83
RPN1-207ENST00000497289 PLEKHG5O94827 1062 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms