RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 PMFBP1Q8TBY8 1022 aa16.74■□□□□ 0.27
GARNL3-220ENST00000496711 MVPQ14764 893 aaKnown RBP16.73■□□□□ 0.27
GARNL3-220ENST00000496711 RGS3P49796 1198 aa16.73■□□□□ 0.27
GARNL3-220ENST00000496711 CALD1Q05682 793 aaKnown RBP16.73■□□□□ 0.27
GARNL3-220ENST00000496711 FAM161AQ3B820 660 aa16.73■□□□□ 0.27
GARNL3-220ENST00000496711 FTSJ3Q8IY81 847 aaKnown RBP16.73■□□□□ 0.27
GARNL3-220ENST00000496711 DZIP1LQ8IYY4 767 aaKnown RBP16.73■□□□□ 0.27
GARNL3-220ENST00000496711 PHACTR3Q96KR7 559 aa16.73■□□□□ 0.27
GARNL3-220ENST00000496711 SSH2Q76I76 1423 aa16.73■□□□□ 0.27
GARNL3-220ENST00000496711 SSH1Q8WYL5 1049 aa16.72■□□□□ 0.27
GARNL3-220ENST00000496711 ZBTB47Q9UFB7 747 aaPredicted RBP16.71■□□□□ 0.27
GARNL3-220ENST00000496711 PIK3C2AO00443 1686 aa16.71■□□□□ 0.27
GARNL3-220ENST00000496711 KIF16BQ96L93 1317 aa16.71■□□□□ 0.27
GARNL3-220ENST00000496711 USP31Q70CQ4 1352 aa16.71■□□□□ 0.27
GARNL3-220ENST00000496711 NUTM2FA1L443 756 aa16.71■□□□□ 0.27
GARNL3-220ENST00000496711 PAK3O75914 559 aaPredicted RBP16.71■□□□□ 0.27
GARNL3-220ENST00000496711 USP54Q70EL1 1684 aa16.7■□□□□ 0.26
GARNL3-220ENST00000496711 C8orf34Q49A92 452 aa16.7■□□□□ 0.26
GARNL3-220ENST00000496711 PIK3R4Q99570 1358 aa16.7■□□□□ 0.26
GARNL3-220ENST00000496711 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
GARNL3-220ENST00000496711 LMOD3Q0VAK6 560 aa16.69■□□□□ 0.26
GARNL3-220ENST00000496711 ALDH1L2Q3SY69 923 aa16.69■□□□□ 0.26
GARNL3-220ENST00000496711 CHD2O14647 1828 aaKnown RBP16.69■□□□□ 0.26
GARNL3-220ENST00000496711 TTC21AQ8NDW8 1320 aa16.69■□□□□ 0.26
GARNL3-220ENST00000496711 ANKARQ7Z5J8 1434 aa16.69■□□□□ 0.26
GARNL3-220ENST00000496711 TRIM27P14373 513 aa16.69■□□□□ 0.26
GARNL3-220ENST00000496711 ATF7IPQ6VMQ6 1270 aa16.69■□□□□ 0.26
GARNL3-220ENST00000496711 ZNF428Q96B54 188 aa16.69■□□□□ 0.26
GARNL3-220ENST00000496711 PCDHB15Q9Y5E8 787 aa16.69■□□□□ 0.26
GARNL3-220ENST00000496711 IFT57Q9NWB7 429 aa16.68■□□□□ 0.26
GARNL3-220ENST00000496711 MARF1Q9Y4F3 1742 aaKnown RBP16.68■□□□□ 0.26
GARNL3-220ENST00000496711 GNAI1P63096 354 aa16.67■□□□□ 0.26
GARNL3-220ENST00000496711 DDX19BQ9UMR2 479 aa16.67■□□□□ 0.26
GARNL3-220ENST00000496711 EIF4A2Q14240 407 aaKnown RBP16.66■□□□□ 0.26
GARNL3-220ENST00000496711 RWDD1Q9H446 243 aaPredicted RBP16.66■□□□□ 0.26
GARNL3-220ENST00000496711 NOB1Q9ULX3 412 aaKnown RBP16.66■□□□□ 0.26
GARNL3-220ENST00000496711 LAS1LQ9Y4W2 734 aaKnown RBP16.66■□□□□ 0.26
GARNL3-220ENST00000496711 IPO8O15397 1037 aaKnown RBP16.65■□□□□ 0.26
GARNL3-220ENST00000496711 THUMPD2Q9BTF0 503 aaKnown RBP16.65■□□□□ 0.26
GARNL3-220ENST00000496711 ADAMTSL3P82987 1691 aa16.65■□□□□ 0.26
GARNL3-220ENST00000496711 ZNF853P0CG23 659 aa16.65■□□□□ 0.26
GARNL3-220ENST00000496711 DDRGK1Q96HY6 314 aa16.65■□□□□ 0.26
GARNL3-220ENST00000496711 BRPF1P55201 1214 aaPredicted RBP16.64■□□□□ 0.25
GARNL3-220ENST00000496711 ITPRIPQ8IWB1 547 aa16.64■□□□□ 0.25
GARNL3-220ENST00000496711 NGDNQ8NEJ9 315 aaKnown RBP16.63■□□□□ 0.25
GARNL3-220ENST00000496711 ARHGEF10O15013 1369 aa16.62■□□□□ 0.25
GARNL3-220ENST00000496711 KCNA6P17658 529 aa16.62■□□□□ 0.25
GARNL3-220ENST00000496711 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
GARNL3-220ENST00000496711 MBIPQ9NS73 344 aa16.62■□□□□ 0.25
GARNL3-220ENST00000496711 SBNO1A3KN83 1393 aa16.61■□□□□ 0.25
GARNL3-220ENST00000496711 FLT4P35916 1363 aa16.61■□□□□ 0.25
GARNL3-220ENST00000496711 SULT6B1Q6IMI4 303 aa16.61■□□□□ 0.25
GARNL3-220ENST00000496711 AEBP1Q8IUX7 1158 aa16.61■□□□□ 0.25
GARNL3-220ENST00000496711 TMEM57Q8N5G2 664 aa16.61■□□□□ 0.25
GARNL3-220ENST00000496711 VAMP4O75379 141 aa16.61■□□□□ 0.25
GARNL3-220ENST00000496711 PDZRN3Q9UPQ7 1066 aa16.61■□□□□ 0.25
GARNL3-220ENST00000496711 HSP90AB2PQ58FF8 381 aa16.6■□□□□ 0.25
GARNL3-220ENST00000496711 MAP3K19Q56UN5 1328 aa16.59■□□□□ 0.25
GARNL3-220ENST00000496711 SETD1BQ9UPS6 1966 aaKnown RBP16.59■□□□□ 0.25
GARNL3-220ENST00000496711 HDAC1Q13547 482 aaPredicted RBP16.59■□□□□ 0.25
GARNL3-220ENST00000496711 FAM83GA6ND36 823 aa16.59■□□□□ 0.25
GARNL3-220ENST00000496711 SOX12O15370 315 aa16.58■□□□□ 0.24
GARNL3-220ENST00000496711 TWISTNBQ3B726 338 aaPredicted RBP16.58■□□□□ 0.24
GARNL3-220ENST00000496711 MRPL50Q8N5N7 158 aaKnown RBP16.58■□□□□ 0.24
GARNL3-220ENST00000496711 TSPYL6Q8N831 410 aa16.58■□□□□ 0.24
GARNL3-220ENST00000496711 ARHGAP45Q92619 1136 aa16.58■□□□□ 0.24
GARNL3-220ENST00000496711 LTN1O94822 1766 aa16.58■□□□□ 0.24
GARNL3-220ENST00000496711 ZBTB40Q9NUA8 1239 aa16.57■□□□□ 0.24
GARNL3-220ENST00000496711 KDRP35968 1356 aa16.56■□□□□ 0.24
GARNL3-220ENST00000496711 DCTN1Q14203 1278 aa16.56■□□□□ 0.24
GARNL3-220ENST00000496711 ANKLE2Q86XL3 938 aa16.56■□□□□ 0.24
GARNL3-220ENST00000496711 LRRC37A3O60309 1634 aa16.56■□□□□ 0.24
GARNL3-220ENST00000496711 KIF24Q5T7B8 1368 aa16.55■□□□□ 0.24
GARNL3-220ENST00000496711 C8orf58Q8NAV2 365 aa16.54■□□□□ 0.24
GARNL3-220ENST00000496711 CHMP4BQ9H444 224 aaKnown RBP16.54■□□□□ 0.24
GARNL3-220ENST00000496711 ABCC4O15439 1325 aa16.54■□□□□ 0.24
GARNL3-220ENST00000496711 ELL2O00472 640 aaPredicted RBP16.53■□□□□ 0.24
GARNL3-220ENST00000496711 IGSF1Q8N6C5 1336 aa16.53■□□□□ 0.24
GARNL3-220ENST00000496711 ADGRL3Q9HAR2 1447 aa16.52■□□□□ 0.24
GARNL3-220ENST00000496711 AMPHP49418 695 aa16.52■□□□□ 0.24
GARNL3-220ENST00000496711 SMC5Q8IY18 1101 aa16.52■□□□□ 0.24
GARNL3-220ENST00000496711 KIAA0232Q92628 1395 aa16.52■□□□□ 0.24
GARNL3-220ENST00000496711 CRB1P82279 1406 aa16.52■□□□□ 0.23
GARNL3-220ENST00000496711 HAP1P54257 671 aaPredicted RBP16.52■□□□□ 0.23
GARNL3-220ENST00000496711 NLRP6P59044 892 aa16.52■□□□□ 0.23
GARNL3-220ENST00000496711 NWD1Q149M9 1564 aa16.51■□□□□ 0.23
GARNL3-220ENST00000496711 NBR1Q14596 966 aa16.51■□□□□ 0.23
GARNL3-220ENST00000496711 API5Q9BZZ5 524 aaKnown RBP16.51■□□□□ 0.23
GARNL3-220ENST00000496711 CHL1O00533 1208 aa16.5■□□□□ 0.23
GARNL3-220ENST00000496711 MCM10Q7L590 875 aa16.5■□□□□ 0.23
GARNL3-220ENST00000496711 RTL1A6NKG5 1358 aa16.5■□□□□ 0.23
GARNL3-220ENST00000496711 PHRF1Q9P1Y6 1649 aaKnown RBP16.49■□□□□ 0.23
GARNL3-220ENST00000496711 USP19O94966 1318 aa16.49■□□□□ 0.23
GARNL3-220ENST00000496711 NPHP4O75161 1426 aaPredicted RBP16.49■□□□□ 0.23
GARNL3-220ENST00000496711 ZBTB7BO15156 539 aaPredicted RBP16.48■□□□□ 0.23
GARNL3-220ENST00000496711 EYA1Q99502 592 aa16.48■□□□□ 0.23
GARNL3-220ENST00000496711 DAXXQ9UER7 740 aaPredicted RBP16.48■□□□□ 0.23
GARNL3-220ENST00000496711 PHF8Q9UPP1 1060 aa16.48■□□□□ 0.23
GARNL3-220ENST00000496711 NFAT5O94916 1531 aa16.48■□□□□ 0.23
GARNL3-220ENST00000496711 FAM208AQ9UK61 1670 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms