RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 RGPD1P0DJD0 1748 aa19.85■□□□□ 0.77
COL15A1-204ENST00000496686 NFE2L2Q16236 605 aa19.85■□□□□ 0.77
COL15A1-204ENST00000496686 TRIM35Q9UPQ4 493 aa19.85■□□□□ 0.77
COL15A1-204ENST00000496686 ATF3P18847 181 aa19.84■□□□□ 0.77
COL15A1-204ENST00000496686 CT47B1P0C2W7 299 aaPredicted RBP19.83■□□□□ 0.77
COL15A1-204ENST00000496686 RIPK4P57078 832 aa19.83■□□□□ 0.77
COL15A1-204ENST00000496686 PAK3O75914 559 aaPredicted RBP19.82■□□□□ 0.76
COL15A1-204ENST00000496686 CALD1Q05682 793 aaKnown RBP19.82■□□□□ 0.76
COL15A1-204ENST00000496686 LMOD3Q0VAK6 560 aa19.82■□□□□ 0.76
COL15A1-204ENST00000496686 CADPS2Q86UW7 1296 aa19.82■□□□□ 0.76
COL15A1-204ENST00000496686 MSH6P52701 1360 aa19.82■□□□□ 0.76
COL15A1-204ENST00000496686 NFAT5O94916 1531 aa19.81■□□□□ 0.76
COL15A1-204ENST00000496686 HMOX1P09601 288 aa19.81■□□□□ 0.76
COL15A1-204ENST00000496686 AMPHP49418 695 aa19.81■□□□□ 0.76
COL15A1-204ENST00000496686 HSP90AB2PQ58FF8 381 aa19.81■□□□□ 0.76
COL15A1-204ENST00000496686 KCNH5Q8NCM2 988 aa19.81■□□□□ 0.76
COL15A1-204ENST00000496686 ORAI2Q96SN7 254 aa19.81■□□□□ 0.76
COL15A1-204ENST00000496686 TRPM3Q9HCF6 1732 aaPredicted RBP19.81■□□□□ 0.76
COL15A1-204ENST00000496686 SLIT3O75094 1523 aa19.81■□□□□ 0.76
COL15A1-204ENST00000496686 PHRF1Q9P1Y6 1649 aaKnown RBP19.8■□□□□ 0.76
COL15A1-204ENST00000496686 KDRP35968 1356 aa19.79■□□□□ 0.76
COL15A1-204ENST00000496686 HOXC9P31274 260 aa19.78■□□□□ 0.76
COL15A1-204ENST00000496686 USP19O94966 1318 aa19.77■□□□□ 0.76
COL15A1-204ENST00000496686 IGSF1Q8N6C5 1336 aa19.77■□□□□ 0.76
COL15A1-204ENST00000496686 KRT28Q7Z3Y7 464 aa19.77■□□□□ 0.76
COL15A1-204ENST00000496686 PHACTR3Q96KR7 559 aa19.77■□□□□ 0.76
COL15A1-204ENST00000496686 FANCIQ9NVI1 1328 aa19.76■□□□□ 0.75
COL15A1-204ENST00000496686 SOX12O15370 315 aa19.76■□□□□ 0.75
COL15A1-204ENST00000496686 FOXO3O43524 673 aa19.76■□□□□ 0.75
COL15A1-204ENST00000496686 SULT6B1Q6IMI4 303 aa19.76■□□□□ 0.75
COL15A1-204ENST00000496686 NUTM2GQ5VZR2 741 aa19.75■□□□□ 0.75
COL15A1-204ENST00000496686 IP6K1Q92551 441 aa19.74■□□□□ 0.75
COL15A1-204ENST00000496686 ALS2Q96Q42 1657 aa19.73■□□□□ 0.75
COL15A1-204ENST00000496686 NPHP3Q7Z494 1330 aa19.73■□□□□ 0.75
COL15A1-204ENST00000496686 XIRP1Q702N8 1843 aaKnown RBP19.72■□□□□ 0.75
COL15A1-204ENST00000496686 RARSP54136 660 aaKnown RBP19.72■□□□□ 0.75
COL15A1-204ENST00000496686 AEBP1Q8IUX7 1158 aa19.72■□□□□ 0.75
COL15A1-204ENST00000496686 EXOC6Q8TAG9 804 aa19.72■□□□□ 0.75
COL15A1-204ENST00000496686 IFT57Q9NWB7 429 aa19.72■□□□□ 0.75
COL15A1-204ENST00000496686 PLIN1O60240 522 aa19.71■□□□□ 0.75
COL15A1-204ENST00000496686 GNAI1P63096 354 aa19.71■□□□□ 0.75
COL15A1-204ENST00000496686 B4GALNT3Q6L9W6 998 aa19.71■□□□□ 0.75
COL15A1-204ENST00000496686 CCDC136Q96JN2 1154 aa19.71■□□□□ 0.75
COL15A1-204ENST00000496686 LTN1O94822 1766 aa19.7■□□□□ 0.74
COL15A1-204ENST00000496686 PDE3AQ14432 1141 aa19.7■□□□□ 0.74
COL15A1-204ENST00000496686 EYA1Q99502 592 aa19.7■□□□□ 0.74
COL15A1-204ENST00000496686 ZNF428Q96B54 188 aa19.69■□□□□ 0.74
COL15A1-204ENST00000496686 CRBNQ96SW2 442 aa19.69■□□□□ 0.74
COL15A1-204ENST00000496686 BCAR3O75815 825 aa19.68■□□□□ 0.74
COL15A1-204ENST00000496686 GCP02774 474 aa19.68■□□□□ 0.74
COL15A1-204ENST00000496686 ZNF853P0CG23 659 aa19.68■□□□□ 0.74
COL15A1-204ENST00000496686 ARHGEF25Q86VW2 580 aa19.68■□□□□ 0.74
COL15A1-204ENST00000496686 TNS3Q68CZ2 1445 aa19.68■□□□□ 0.74
COL15A1-204ENST00000496686 PXDNQ92626 1479 aa19.67■□□□□ 0.74
COL15A1-204ENST00000496686 EXOSC9Q06265 439 aaKnown RBP19.67■□□□□ 0.74
COL15A1-204ENST00000496686 GAS2L2Q8NHY3 880 aa19.67■□□□□ 0.74
COL15A1-204ENST00000496686 TSR2Q969E8 191 aaKnown RBP19.67■□□□□ 0.74
COL15A1-204ENST00000496686 ZNF335Q9H4Z2 1342 aaPredicted RBP19.67■□□□□ 0.74
COL15A1-204ENST00000496686 XPCQ01831 940 aaPredicted RBP19.66■□□□□ 0.74
COL15A1-204ENST00000496686 ABCC6O95255 1503 aa19.66■□□□□ 0.74
COL15A1-204ENST00000496686 MED1Q15648 1581 aaPredicted RBP19.66■□□□□ 0.74
COL15A1-204ENST00000496686 DLG5Q8TDM6 1919 aa19.65■□□□□ 0.74
COL15A1-204ENST00000496686 HTATSF1O43719 755 aaKnown RBP19.65■□□□□ 0.74
COL15A1-204ENST00000496686 CFAP44Q96MT7 982 aa19.65■□□□□ 0.74
COL15A1-204ENST00000496686 C20orf194Q5TEA3 1177 aa19.64■□□□□ 0.73
COL15A1-204ENST00000496686 NCAPD2Q15021 1401 aa19.64■□□□□ 0.73
COL15A1-204ENST00000496686 MS4A1P11836 297 aa19.63■□□□□ 0.73
COL15A1-204ENST00000496686 AAMPQ13685 434 aa19.63■□□□□ 0.73
COL15A1-204ENST00000496686 ALDH1L2Q3SY69 923 aa19.63■□□□□ 0.73
COL15A1-204ENST00000496686 SPATA31A3Q5VYP0 1347 aa19.62■□□□□ 0.73
COL15A1-204ENST00000496686 CANXP27824 592 aaKnown RBP19.62■□□□□ 0.73
COL15A1-204ENST00000496686 BRPF1P55201 1214 aaPredicted RBP19.61■□□□□ 0.73
COL15A1-204ENST00000496686 LMOD2Q6P5Q4 547 aa19.61■□□□□ 0.73
COL15A1-204ENST00000496686 BRINP3Q76B58 766 aa19.61■□□□□ 0.73
COL15A1-204ENST00000496686 CAMTA1Q9Y6Y1 1673 aa19.6■□□□□ 0.73
COL15A1-204ENST00000496686 MTHFSDQ2M296 383 aaKnown RBP19.6■□□□□ 0.73
COL15A1-204ENST00000496686 THUMPD2Q9BTF0 503 aaKnown RBP19.6■□□□□ 0.73
COL15A1-204ENST00000496686 MBIPQ9NS73 344 aa19.59■□□□□ 0.73
COL15A1-204ENST00000496686 SLAIN2Q9P270 581 aa19.59■□□□□ 0.73
COL15A1-204ENST00000496686 CRB1P82279 1406 aa19.59■□□□□ 0.73
COL15A1-204ENST00000496686 KIF16BQ96L93 1317 aa19.58■□□□□ 0.73
COL15A1-204ENST00000496686 HAP1P54257 671 aaPredicted RBP19.58■□□□□ 0.72
COL15A1-204ENST00000496686 ZKSCAN2Q63HK3 967 aa19.58■□□□□ 0.72
COL15A1-204ENST00000496686 RTF1Q92541 710 aaKnown RBP19.58■□□□□ 0.72
COL15A1-204ENST00000496686 LTV1Q96GA3 475 aaPredicted RBP19.58■□□□□ 0.72
COL15A1-204ENST00000496686 SMC4Q9NTJ3 1288 aa19.58■□□□□ 0.72
COL15A1-204ENST00000496686 LRRC37A3O60309 1634 aa19.58■□□□□ 0.72
COL15A1-204ENST00000496686 SOS2Q07890 1332 aaPredicted RBP19.57■□□□□ 0.72
COL15A1-204ENST00000496686 FAM83GA6ND36 823 aa19.57■□□□□ 0.72
COL15A1-204ENST00000496686 CHL1O00533 1208 aa19.57■□□□□ 0.72
COL15A1-204ENST00000496686 LAS1LQ9Y4W2 734 aaKnown RBP19.57■□□□□ 0.72
COL15A1-204ENST00000496686 CPDO75976 1380 aa19.57■□□□□ 0.72
COL15A1-204ENST00000496686 KIAA0232Q92628 1395 aa19.57■□□□□ 0.72
COL15A1-204ENST00000496686 PLEKHG2Q9H7P9 1386 aa19.57■□□□□ 0.72
COL15A1-204ENST00000496686 CRYBG1Q9Y4K1 1723 aa19.56■□□□□ 0.72
COL15A1-204ENST00000496686 SSH1Q8WYL5 1049 aa19.56■□□□□ 0.72
COL15A1-204ENST00000496686 MAP3K5Q99683 1374 aa19.56■□□□□ 0.72
COL15A1-204ENST00000496686 NBPF6Q5VWK0 638 aa19.55■□□□□ 0.72
COL15A1-204ENST00000496686 FRAT1Q92837 279 aaPredicted RBP19.55■□□□□ 0.72
COL15A1-204ENST00000496686 NBPF4Q96M43 638 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms