RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ABCC3O15438 1527 aa8.27□□□□□ -1.09
SSBP1-213ENST00000496622 EVI5O60447 810 aa8.27□□□□□ -1.09
SSBP1-213ENST00000496622 CEP152O94986 1710 aa8.26□□□□□ -1.09
SSBP1-213ENST00000496622 TET3O43151 1660 aa8.26□□□□□ -1.09
SSBP1-213ENST00000496622 SETD1BQ9UPS6 1966 aaKnown RBP8.26□□□□□ -1.09
SSBP1-213ENST00000496622 NHSL1Q5SYE7 1610 aa8.26□□□□□ -1.09
SSBP1-213ENST00000496622 TMF1P82094 1093 aa8.26□□□□□ -1.09
SSBP1-213ENST00000496622 AXIN2Q9Y2T1 843 aa8.26□□□□□ -1.09
SSBP1-213ENST00000496622 CPS1P31327 1500 aa8.26□□□□□ -1.09
SSBP1-213ENST00000496622 ERBB3P21860 1342 aa8.26□□□□□ -1.09
SSBP1-213ENST00000496622 PER1O15534 1290 aaPredicted RBP8.26□□□□□ -1.09
SSBP1-213ENST00000496622 C1QTNF8P60827 252 aa8.26□□□□□ -1.09
SSBP1-213ENST00000496622 AGLP35573 1532 aa8.26□□□□□ -1.09
SSBP1-213ENST00000496622 PRELPP51888 382 aa8.25□□□□□ -1.09
SSBP1-213ENST00000496622 TRPM1Q7Z4N2 1603 aa8.25□□□□□ -1.09
SSBP1-213ENST00000496622 RNF17Q9BXT8 1623 aaKnown RBP8.25□□□□□ -1.09
SSBP1-213ENST00000496622 SPHKAPQ2M3C7 1700 aa8.25□□□□□ -1.09
SSBP1-213ENST00000496622 MROH2AA6NES4 1674 aa8.24□□□□□ -1.09
SSBP1-213ENST00000496622 SEMA3EO15041 775 aa8.24□□□□□ -1.09
SSBP1-213ENST00000496622 ESF1Q9H501 851 aaKnown RBP8.24□□□□□ -1.09
SSBP1-213ENST00000496622 SIGLEC1Q9BZZ2 1709 aa8.24□□□□□ -1.09
SSBP1-213ENST00000496622 EIF2AK4Q9P2K8 1649 aaKnown RBP8.24□□□□□ -1.09
SSBP1-213ENST00000496622 TMC1Q8TDI8 760 aa8.23□□□□□ -1.09
SSBP1-213ENST00000496622 MLLT3P42568 568 aaPredicted RBP8.23□□□□□ -1.09
SSBP1-213ENST00000496622 POTEEQ6S8J3 1075 aa8.23□□□□□ -1.09
SSBP1-213ENST00000496622 C14orf93Q9H972 538 aaKnown RBP8.23□□□□□ -1.09
SSBP1-213ENST00000496622 ZSWIM6Q9HCJ5 1215 aa8.23□□□□□ -1.09
SSBP1-213ENST00000496622 PIP4K2BP78356 416 aa8.22□□□□□ -1.09
SSBP1-213ENST00000496622 TMEM132AQ24JP5 1023 aa8.22□□□□□ -1.09
SSBP1-213ENST00000496622 IL27Q8NEV9 243 aa8.22□□□□□ -1.09
SSBP1-213ENST00000496622 NAP1L2Q9ULW6 460 aaPredicted RBP8.22□□□□□ -1.09
SSBP1-213ENST00000496622 LMTK2Q8IWU2 1503 aa8.22□□□□□ -1.09
SSBP1-213ENST00000496622 SLC12A5Q9H2X9 1139 aa8.22□□□□□ -1.09
SSBP1-213ENST00000496622 SLC52A1Q9NWF4 448 aa8.22□□□□□ -1.09
SSBP1-213ENST00000496622 GRXCR2A6NFK2 248 aa8.21□□□□□ -1.09
SSBP1-213ENST00000496622 ZNF454Q8N9F8 522 aa8.21□□□□□ -1.1
SSBP1-213ENST00000496622 SCAF11Q99590 1463 aaKnown RBP8.21□□□□□ -1.1
SSBP1-213ENST00000496622 TBC1D12O60347 775 aa8.2□□□□□ -1.1
SSBP1-213ENST00000496622 TNNT2P45379 298 aaPredicted RBP8.2□□□□□ -1.1
SSBP1-213ENST00000496622 PRIM1P49642 420 aaKnown RBP8.2□□□□□ -1.1
SSBP1-213ENST00000496622 SYNMO15061 1565 aa8.2□□□□□ -1.1
SSBP1-213ENST00000496622 ZMYM3Q14202 1370 aa8.2□□□□□ -1.1
SSBP1-213ENST00000496622 HSP90B1P14625 803 aaKnown RBP8.2□□□□□ -1.1
SSBP1-213ENST00000496622 PDIA6Q15084 440 aa8.2□□□□□ -1.1
SSBP1-213ENST00000496622 CARD14Q9BXL6 1004 aa8.2□□□□□ -1.1
SSBP1-213ENST00000496622 IGSF3O75054 1194 aa8.19□□□□□ -1.1
SSBP1-213ENST00000496622 PNISRQ8TF01 805 aaKnown RBP8.19□□□□□ -1.1
SSBP1-213ENST00000496622 CENPJQ9HC77 1338 aaPredicted RBP8.19□□□□□ -1.1
SSBP1-213ENST00000496622 WAPLQ7Z5K2 1190 aa8.19□□□□□ -1.1
SSBP1-213ENST00000496622 STAC3Q96MF2 364 aa8.19□□□□□ -1.1
SSBP1-213ENST00000496622 KNSTRNQ9Y448 316 aa8.19□□□□□ -1.1
SSBP1-213ENST00000496622 SUPT16HQ9Y5B9 1047 aaKnown RBP8.19□□□□□ -1.1
SSBP1-213ENST00000496622 PCDHGA10Q9Y5H3 936 aa8.19□□□□□ -1.1
SSBP1-213ENST00000496622 PIK3C2GO75747 1445 aa8.19□□□□□ -1.1
SSBP1-213ENST00000496622 CDAN1Q8IWY9 1227 aa8.18□□□□□ -1.1
SSBP1-213ENST00000496622 MINK1Q8N4C8 1332 aaPredicted RBP8.18□□□□□ -1.1
SSBP1-213ENST00000496622 ADGRB3O60242 1522 aa8.18□□□□□ -1.1
SSBP1-213ENST00000496622 CAMSAP1Q5T5Y3 1602 aa8.18□□□□□ -1.1
SSBP1-213ENST00000496622 PSEN2P49810 448 aa8.18□□□□□ -1.1
SSBP1-213ENST00000496622 PRAM1Q96QH2 718 aa8.18□□□□□ -1.1
SSBP1-213ENST00000496622 C3P01024 1663 aa8.17□□□□□ -1.1
SSBP1-213ENST00000496622 ARHGAP31Q2M1Z3 1444 aa8.17□□□□□ -1.1
SSBP1-213ENST00000496622 BCCIPQ9P287 314 aaKnown RBP eCLIP8.17□□□□□ -1.1
SSBP1-213ENST00000496622 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
SSBP1-213ENST00000496622 KRTAP3-2Q9BYR7 98 aa8.17□□□□□ -1.1
SSBP1-213ENST00000496622 CHMP4BQ9H444 224 aaKnown RBP8.17□□□□□ -1.1
SSBP1-213ENST00000496622 ZNF142P52746 1687 aaPredicted RBP8.17□□□□□ -1.1
SSBP1-213ENST00000496622 KTN1Q86UP2 1357 aaKnown RBP8.17□□□□□ -1.1
SSBP1-213ENST00000496622 RPGRIP1LQ68CZ1 1315 aa8.17□□□□□ -1.1
SSBP1-213ENST00000496622 MYBBP1AQ9BQG0 1328 aaKnown RBP8.17□□□□□ -1.1
SSBP1-213ENST00000496622 ADAM33Q9BZ11 813 aa8.16□□□□□ -1.1
SSBP1-213ENST00000496622 MYOM2P54296 1465 aa8.16□□□□□ -1.1
SSBP1-213ENST00000496622 ERVK-7P63135 1459 aa8.16□□□□□ -1.1
SSBP1-213ENST00000496622 ARHGEF1Q92888 912 aaKnown RBP8.16□□□□□ -1.1
SSBP1-213ENST00000496622 EIF3AQ14152 1382 aaKnown RBP8.16□□□□□ -1.1
SSBP1-213ENST00000496622 NUTM2FA1L443 756 aa8.16□□□□□ -1.1
SSBP1-213ENST00000496622 SRPK2P78362 688 aaKnown RBP8.16□□□□□ -1.1
SSBP1-213ENST00000496622 NBR1Q14596 966 aa8.16□□□□□ -1.1
SSBP1-213ENST00000496622 RALBP1Q15311 655 aa8.16□□□□□ -1.1
SSBP1-213ENST00000496622 TSR1Q2NL82 804 aaKnown RBP8.16□□□□□ -1.1
SSBP1-213ENST00000496622 POGKQ9P215 609 aa8.16□□□□□ -1.1
SSBP1-213ENST00000496622 KIF1BO60333 1816 aa8.15□□□□□ -1.1
SSBP1-213ENST00000496622 FOSBP53539 338 aa8.15□□□□□ -1.1
SSBP1-213ENST00000496622 TXNDC2Q86VQ3 553 aa8.15□□□□□ -1.1
SSBP1-213ENST00000496622 SLC26A8Q96RN1 970 aa8.15□□□□□ -1.1
SSBP1-213ENST00000496622 NRXN1Q9ULB1 1477 aa8.15□□□□□ -1.1
SSBP1-213ENST00000496622 ALKQ9UM73 1620 aa8.15□□□□□ -1.11
SSBP1-213ENST00000496622 LRRC7Q96NW7 1537 aa8.15□□□□□ -1.11
SSBP1-213ENST00000496622 LTKP29376 864 aa8.15□□□□□ -1.11
SSBP1-213ENST00000496622 NLRP13Q86W25 1043 aa8.15□□□□□ -1.11
SSBP1-213ENST00000496622 PARD3Q8TEW0 1356 aa8.14□□□□□ -1.11
SSBP1-213ENST00000496622 ZNF335Q9H4Z2 1342 aaPredicted RBP8.14□□□□□ -1.11
SSBP1-213ENST00000496622 CDCA8Q53HL2 280 aa8.14□□□□□ -1.11
SSBP1-213ENST00000496622 NEXMIFQ5QGS0 1516 aa8.14□□□□□ -1.11
SSBP1-213ENST00000496622 FBLN1P23142 703 aa8.14□□□□□ -1.11
SSBP1-213ENST00000496622 ADGRB1O14514 1584 aa8.14□□□□□ -1.11
SSBP1-213ENST00000496622 PLEKHH1Q9ULM0 1364 aa8.13□□□□□ -1.11
SSBP1-213ENST00000496622 PIK3C2BO00750 1634 aa8.13□□□□□ -1.11
SSBP1-213ENST00000496622 PPP2R1AP30153 589 aa8.13□□□□□ -1.11
SSBP1-213ENST00000496622 ADAMTS8Q9UP79 889 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms