RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 SEC24BO95487 1268 aa19.05■□□□□ 0.64
UBXN11-216ENST00000496466 IL13P35225 146 aa19.05■□□□□ 0.64
UBXN11-216ENST00000496466 AATKQ6ZMQ8 1374 aa19.04■□□□□ 0.64
UBXN11-216ENST00000496466 TRIM27P14373 513 aa19.04■□□□□ 0.64
UBXN11-216ENST00000496466 THEMISQ8N1K5 641 aaPredicted RBP19.03■□□□□ 0.64
UBXN11-216ENST00000496466 PHACTR3Q96KR7 559 aa19.03■□□□□ 0.64
UBXN11-216ENST00000496466 TBX22Q9Y458 520 aa19.03■□□□□ 0.64
UBXN11-216ENST00000496466 ACEP12821 1306 aa19.03■□□□□ 0.64
UBXN11-216ENST00000496466 ATF7IPQ6VMQ6 1270 aa19.02■□□□□ 0.64
UBXN11-216ENST00000496466 CDK12Q9NYV4 1490 aaPredicted RBP19.02■□□□□ 0.64
UBXN11-216ENST00000496466 DNAJC5Q9H3Z4 198 aa19.02■□□□□ 0.64
UBXN11-216ENST00000496466 NOB1Q9ULX3 412 aaKnown RBP19.02■□□□□ 0.64
UBXN11-216ENST00000496466 TTC21BQ7Z4L5 1316 aa19.01■□□□□ 0.63
UBXN11-216ENST00000496466 PLEKHG3A1L390 1219 aa19.01■□□□□ 0.63
UBXN11-216ENST00000496466 DDX19BQ9UMR2 479 aa19■□□□□ 0.63
UBXN11-216ENST00000496466 TOPAZ1Q8N9V7 1692 aa19■□□□□ 0.63
UBXN11-216ENST00000496466 NFKBIBQ15653 356 aa19■□□□□ 0.63
UBXN11-216ENST00000496466 ITPRIPQ8IWB1 547 aa18.99■□□□□ 0.63
UBXN11-216ENST00000496466 NFE2L2Q16236 605 aa18.98■□□□□ 0.63
UBXN11-216ENST00000496466 HDAC1Q13547 482 aaPredicted RBP18.97■□□□□ 0.63
UBXN11-216ENST00000496466 ALDH1L2Q3SY69 923 aa18.97■□□□□ 0.63
UBXN11-216ENST00000496466 NRKQ7Z2Y5 1582 aa18.97■□□□□ 0.63
UBXN11-216ENST00000496466 USP6P35125 1406 aa18.97■□□□□ 0.63
UBXN11-216ENST00000496466 TMEM57Q8N5G2 664 aa18.97■□□□□ 0.63
UBXN11-216ENST00000496466 KIF16BQ96L93 1317 aa18.97■□□□□ 0.63
UBXN11-216ENST00000496466 PTCH1Q13635 1447 aa18.96■□□□□ 0.63
UBXN11-216ENST00000496466 IPO8O15397 1037 aaKnown RBP18.96■□□□□ 0.63
UBXN11-216ENST00000496466 THUMPD2Q9BTF0 503 aaKnown RBP18.96■□□□□ 0.63
UBXN11-216ENST00000496466 OVOS2A0A0J9YW53 1432 aa18.94■□□□□ 0.62
UBXN11-216ENST00000496466 OVOS2Q6IE36 1432 aa18.94■□□□□ 0.62
UBXN11-216ENST00000496466 ZBTB40Q9NUA8 1239 aa18.94■□□□□ 0.62
UBXN11-216ENST00000496466 DIP2AQ14689 1571 aa18.92■□□□□ 0.62
UBXN11-216ENST00000496466 SSH2Q76I76 1423 aa18.92■□□□□ 0.62
UBXN11-216ENST00000496466 KCNA6P17658 529 aa18.92■□□□□ 0.62
UBXN11-216ENST00000496466 BRPF1P55201 1214 aaPredicted RBP18.92■□□□□ 0.62
UBXN11-216ENST00000496466 ZNF428Q96B54 188 aa18.92■□□□□ 0.62
UBXN11-216ENST00000496466 SOX12O15370 315 aa18.91■□□□□ 0.62
UBXN11-216ENST00000496466 EIF4A2Q14240 407 aaKnown RBP18.91■□□□□ 0.62
UBXN11-216ENST00000496466 TBC1D32Q96NH3 1257 aa18.91■□□□□ 0.62
UBXN11-216ENST00000496466 UPF2Q9HAU5 1272 aaKnown RBP18.91■□□□□ 0.62
UBXN11-216ENST00000496466 CALD1Q05682 793 aaKnown RBP18.91■□□□□ 0.62
UBXN11-216ENST00000496466 SMC5Q8IY18 1101 aa18.91■□□□□ 0.62
UBXN11-216ENST00000496466 CEP170BQ9Y4F5 1589 aaPredicted RBP18.91■□□□□ 0.62
UBXN11-216ENST00000496466 AEBP1Q8IUX7 1158 aa18.9■□□□□ 0.62
UBXN11-216ENST00000496466 VAMP4O75379 141 aa18.9■□□□□ 0.62
UBXN11-216ENST00000496466 BECN1Q14457 450 aa18.9■□□□□ 0.62
UBXN11-216ENST00000496466 XRN1Q8IZH2 1706 aaKnown RBP18.9■□□□□ 0.62
UBXN11-216ENST00000496466 NGDNQ8NEJ9 315 aaKnown RBP18.89■□□□□ 0.61
UBXN11-216ENST00000496466 IFT57Q9NWB7 429 aa18.89■□□□□ 0.61
UBXN11-216ENST00000496466 GNAI1P63096 354 aa18.89■□□□□ 0.61
UBXN11-216ENST00000496466 HSP90AB2PQ58FF8 381 aa18.89■□□□□ 0.61
UBXN11-216ENST00000496466 RIMS1Q86UR5 1692 aaKnown RBP18.88■□□□□ 0.61
UBXN11-216ENST00000496466 RGPD8O14715 1765 aaPredicted RBP18.88■□□□□ 0.61
UBXN11-216ENST00000496466 FAM83GA6ND36 823 aa18.88■□□□□ 0.61
UBXN11-216ENST00000496466 ZNF853P0CG23 659 aa18.88■□□□□ 0.61
UBXN11-216ENST00000496466 MRPL50Q8N5N7 158 aaKnown RBP18.88■□□□□ 0.61
UBXN11-216ENST00000496466 USP31Q70CQ4 1352 aa18.88■□□□□ 0.61
UBXN11-216ENST00000496466 SULT6B1Q6IMI4 303 aa18.88■□□□□ 0.61
UBXN11-216ENST00000496466 PEAK1Q9H792 1746 aa18.87■□□□□ 0.61
UBXN11-216ENST00000496466 TTC21AQ8NDW8 1320 aa18.87■□□□□ 0.61
UBXN11-216ENST00000496466 TSPYL6Q8N831 410 aa18.86■□□□□ 0.61
UBXN11-216ENST00000496466 MBIPQ9NS73 344 aa18.86■□□□□ 0.61
UBXN11-216ENST00000496466 NALCNQ8IZF0 1738 aa18.86■□□□□ 0.61
UBXN11-216ENST00000496466 FRAT2O75474 233 aaPredicted RBP18.86■□□□□ 0.61
UBXN11-216ENST00000496466 DLG5Q8TDM6 1919 aa18.86■□□□□ 0.61
UBXN11-216ENST00000496466 DCTN1Q14203 1278 aa18.85■□□□□ 0.61
UBXN11-216ENST00000496466 ARHGAP45Q92619 1136 aa18.85■□□□□ 0.61
UBXN11-216ENST00000496466 LMOD3Q0VAK6 560 aa18.84■□□□□ 0.61
UBXN11-216ENST00000496466 GSE1Q14687 1217 aa18.84■□□□□ 0.61
UBXN11-216ENST00000496466 MAP3K19Q56UN5 1328 aa18.84■□□□□ 0.61
UBXN11-216ENST00000496466 PIK3R4Q99570 1358 aa18.84■□□□□ 0.61
UBXN11-216ENST00000496466 ELL2O00472 640 aaPredicted RBP18.83■□□□□ 0.61
UBXN11-216ENST00000496466 NUCB1Q02818 461 aa18.83■□□□□ 0.61
UBXN11-216ENST00000496466 CFAP44Q96MT7 982 aa18.83■□□□□ 0.61
UBXN11-216ENST00000496466 ZBTB7BO15156 539 aaPredicted RBP18.83■□□□□ 0.6
UBXN11-216ENST00000496466 ANKLE2Q86XL3 938 aa18.83■□□□□ 0.6
UBXN11-216ENST00000496466 ANO8Q9HCE9 1232 aaPredicted RBP18.82■□□□□ 0.6
UBXN11-216ENST00000496466 TWISTNBQ3B726 338 aaPredicted RBP18.81■□□□□ 0.6
UBXN11-216ENST00000496466 RBM33Q96EV2 1170 aaKnown RBP18.81■□□□□ 0.6
UBXN11-216ENST00000496466 TBC1D2Q9BYX2 928 aa18.81■□□□□ 0.6
UBXN11-216ENST00000496466 ANKARQ7Z5J8 1434 aa18.81■□□□□ 0.6
UBXN11-216ENST00000496466 C8orf58Q8NAV2 365 aa18.8■□□□□ 0.6
UBXN11-216ENST00000496466 CHMP4BQ9H444 224 aaKnown RBP18.8■□□□□ 0.6
UBXN11-216ENST00000496466 NLRP6P59044 892 aa18.79■□□□□ 0.6
UBXN11-216ENST00000496466 NUTM2GQ5VZR2 741 aa18.79■□□□□ 0.6
UBXN11-216ENST00000496466 C22orf23Q9BZE7 217 aa18.79■□□□□ 0.6
UBXN11-216ENST00000496466 PIK3C2AO00443 1686 aa18.79■□□□□ 0.6
UBXN11-216ENST00000496466 ABCC4O15439 1325 aa18.79■□□□□ 0.6
UBXN11-216ENST00000496466 MFAP1P55081 439 aaKnown RBP18.79■□□□□ 0.6
UBXN11-216ENST00000496466 CHD1LQ86WJ1 897 aa18.79■□□□□ 0.6
UBXN11-216ENST00000496466 SLKQ9H2G2 1235 aaPredicted RBP18.79■□□□□ 0.6
UBXN11-216ENST00000496466 ANTXR1Q9H6X2 564 aa18.79■□□□□ 0.6
UBXN11-216ENST00000496466 RGPD1P0DJD0 1748 aa18.79■□□□□ 0.6
UBXN11-216ENST00000496466 FMN2Q9NZ56 1722 aa18.78■□□□□ 0.6
UBXN11-216ENST00000496466 LNPKQ9C0E8 428 aa18.78■□□□□ 0.6
UBXN11-216ENST00000496466 SBNO1A3KN83 1393 aa18.78■□□□□ 0.6
UBXN11-216ENST00000496466 MCM10Q7L590 875 aa18.77■□□□□ 0.6
UBXN11-216ENST00000496466 FLT4P35916 1363 aa18.77■□□□□ 0.6
UBXN11-216ENST00000496466 AMPHP49418 695 aa18.77■□□□□ 0.59
UBXN11-216ENST00000496466 C1orf115Q9H7X2 142 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms