RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 TTC21BQ7Z4L5 1316 aa11.53□□□□□ -0.56
TM9SF4-207ENST00000495749 NLRP6P59044 892 aa11.53□□□□□ -0.56
TM9SF4-207ENST00000495749 THEMISQ8N1K5 641 aaPredicted RBP11.53□□□□□ -0.56
TM9SF4-207ENST00000495749 TMEM57Q8N5G2 664 aa11.52□□□□□ -0.57
TM9SF4-207ENST00000495749 PDZRN3Q9UPQ7 1066 aa11.52□□□□□ -0.57
TM9SF4-207ENST00000495749 EIF4A2Q14240 407 aaKnown RBP11.52□□□□□ -0.57
TM9SF4-207ENST00000495749 CCDC27Q2M243 656 aa11.52□□□□□ -0.57
TM9SF4-207ENST00000495749 RIMS1Q86UR5 1692 aaKnown RBP11.51□□□□□ -0.57
TM9SF4-207ENST00000495749 AMPHP49418 695 aa11.51□□□□□ -0.57
TM9SF4-207ENST00000495749 NFE2L2Q16236 605 aa11.51□□□□□ -0.57
TM9SF4-207ENST00000495749 NECTIN2Q92692 538 aa11.51□□□□□ -0.57
TM9SF4-207ENST00000495749 UPF2Q9HAU5 1272 aaKnown RBP11.51□□□□□ -0.57
TM9SF4-207ENST00000495749 NLRP1Q9C000 1473 aa11.51□□□□□ -0.57
TM9SF4-207ENST00000495749 SPATA31D1Q6ZQQ2 1576 aa11.51□□□□□ -0.57
TM9SF4-207ENST00000495749 C8orf58Q8NAV2 365 aa11.5□□□□□ -0.57
TM9SF4-207ENST00000495749 FBXO41Q8TF61 875 aa11.5□□□□□ -0.57
TM9SF4-207ENST00000495749 CPS1P31327 1500 aa11.5□□□□□ -0.57
TM9SF4-207ENST00000495749 ADAMTS13Q76LX8 1427 aa11.5□□□□□ -0.57
TM9SF4-207ENST00000495749 USHBP1Q8N6Y0 703 aa11.5□□□□□ -0.57
TM9SF4-207ENST00000495749 ZNF692Q9BU19 519 aaPredicted RBP11.5□□□□□ -0.57
TM9SF4-207ENST00000495749 MBIPQ9NS73 344 aa11.5□□□□□ -0.57
TM9SF4-207ENST00000495749 PTPRUQ92729 1446 aa11.49□□□□□ -0.57
TM9SF4-207ENST00000495749 MVPQ14764 893 aaKnown RBP11.49□□□□□ -0.57
TM9SF4-207ENST00000495749 RWDD1Q9H446 243 aaPredicted RBP11.49□□□□□ -0.57
TM9SF4-207ENST00000495749 VIRMAQ69YN4 1812 aaKnown RBP11.49□□□□□ -0.57
TM9SF4-207ENST00000495749 SHPRHQ149N8 1683 aa11.49□□□□□ -0.57
TM9SF4-207ENST00000495749 ATF7IPQ6VMQ6 1270 aa11.49□□□□□ -0.57
TM9SF4-207ENST00000495749 ABTB2Q8N961 1025 aa11.49□□□□□ -0.57
TM9SF4-207ENST00000495749 SPRYD3Q8NCJ5 442 aa11.48□□□□□ -0.57
TM9SF4-207ENST00000495749 PNNQ9H307 717 aaKnown RBP11.48□□□□□ -0.57
TM9SF4-207ENST00000495749 TBC1D32Q96NH3 1257 aa11.48□□□□□ -0.57
TM9SF4-207ENST00000495749 APBB1O00213 710 aa11.47□□□□□ -0.57
TM9SF4-207ENST00000495749 AAMPQ13685 434 aa11.47□□□□□ -0.57
TM9SF4-207ENST00000495749 MAP3K19Q56UN5 1328 aa11.47□□□□□ -0.57
TM9SF4-207ENST00000495749 IQSEC2Q5JU85 1478 aa11.47□□□□□ -0.57
TM9SF4-207ENST00000495749 ESCO1Q5FWF5 840 aa11.47□□□□□ -0.57
TM9SF4-207ENST00000495749 TBC1D2Q9BYX2 928 aa11.47□□□□□ -0.57
TM9SF4-207ENST00000495749 EDC4Q6P2E9 1401 aaKnown RBP11.47□□□□□ -0.57
TM9SF4-207ENST00000495749 CPSF1Q10570 1443 aaKnown RBP11.46□□□□□ -0.57
TM9SF4-207ENST00000495749 TWISTNBQ3B726 338 aaPredicted RBP11.46□□□□□ -0.57
TM9SF4-207ENST00000495749 PNPLA6Q8IY17 1366 aa11.46□□□□□ -0.57
TM9SF4-207ENST00000495749 PODXL2Q9NZ53 605 aa11.46□□□□□ -0.57
TM9SF4-207ENST00000495749 C3P01024 1663 aa11.46□□□□□ -0.57
TM9SF4-207ENST00000495749 VAMP4O75379 141 aa11.46□□□□□ -0.58
TM9SF4-207ENST00000495749 ANTXR1Q9H6X2 564 aa11.46□□□□□ -0.58
TM9SF4-207ENST00000495749 TBX22Q9Y458 520 aa11.45□□□□□ -0.58
TM9SF4-207ENST00000495749 ARXQ96QS3 562 aa11.45□□□□□ -0.58
TM9SF4-207ENST00000495749 LNPKQ9C0E8 428 aa11.45□□□□□ -0.58
TM9SF4-207ENST00000495749 COL3A1P02461 1466 aaPredicted RBP11.45□□□□□ -0.58
TM9SF4-207ENST00000495749 ZNF428Q96B54 188 aa11.44□□□□□ -0.58
TM9SF4-207ENST00000495749 PLEKHG1Q9ULL1 1385 aa11.44□□□□□ -0.58
TM9SF4-207ENST00000495749 PLEKHG3A1L390 1219 aa11.44□□□□□ -0.58
TM9SF4-207ENST00000495749 GNAI1P63096 354 aa11.44□□□□□ -0.58
TM9SF4-207ENST00000495749 MFAP1P55081 439 aaKnown RBP11.43□□□□□ -0.58
TM9SF4-207ENST00000495749 ANKLE2Q86XL3 938 aa11.43□□□□□ -0.58
TM9SF4-207ENST00000495749 PSME1Q06323 249 aa11.43□□□□□ -0.58
TM9SF4-207ENST00000495749 MTHFSDQ2M296 383 aaKnown RBP11.43□□□□□ -0.58
TM9SF4-207ENST00000495749 ORAI2Q96SN7 254 aa11.43□□□□□ -0.58
TM9SF4-207ENST00000495749 EYA1Q99502 592 aa11.43□□□□□ -0.58
TM9SF4-207ENST00000495749 ATP7BP35670 1465 aa11.43□□□□□ -0.58
TM9SF4-207ENST00000495749 NRXN3Q9Y4C0 1643 aa11.42□□□□□ -0.58
TM9SF4-207ENST00000495749 IPO8O15397 1037 aaKnown RBP11.42□□□□□ -0.58
TM9SF4-207ENST00000495749 SLC4A10Q6U841 1118 aa11.42□□□□□ -0.58
TM9SF4-207ENST00000495749 DDX17Q92841 729 aaKnown RBP11.42□□□□□ -0.58
TM9SF4-207ENST00000495749 DDX19BQ9UMR2 479 aa11.41□□□□□ -0.58
TM9SF4-207ENST00000495749 FAM135BQ49AJ0 1406 aa11.41□□□□□ -0.58
TM9SF4-207ENST00000495749 LRRC7Q96NW7 1537 aa11.41□□□□□ -0.58
TM9SF4-207ENST00000495749 RTF1Q92541 710 aaKnown RBP11.41□□□□□ -0.58
TM9SF4-207ENST00000495749 SIRT1Q96EB6 747 aa11.41□□□□□ -0.58
TM9SF4-207ENST00000495749 CFAP44Q96MT7 982 aa11.41□□□□□ -0.58
TM9SF4-207ENST00000495749 C22orf23Q9BZE7 217 aa11.41□□□□□ -0.58
TM9SF4-207ENST00000495749 ANKRD45Q5TZF3 282 aa11.41□□□□□ -0.58
TM9SF4-207ENST00000495749 F6X3S4 739 aa11.4□□□□□ -0.58
TM9SF4-207ENST00000495749 MRPL50Q8N5N7 158 aaKnown RBP11.4□□□□□ -0.58
TM9SF4-207ENST00000495749 GZF1Q9H116 711 aaPredicted RBP11.4□□□□□ -0.58
TM9SF4-207ENST00000495749 USP6P35125 1406 aa11.39□□□□□ -0.59
TM9SF4-207ENST00000495749 FAM43AQ8N2R8 423 aa11.39□□□□□ -0.59
TM9SF4-207ENST00000495749 IFT57Q9NWB7 429 aa11.39□□□□□ -0.59
TM9SF4-207ENST00000495749 PHF8Q9UPP1 1060 aa11.39□□□□□ -0.59
TM9SF4-207ENST00000495749 LRRC59Q96AG4 307 aaKnown RBP11.39□□□□□ -0.59
TM9SF4-207ENST00000495749 ZBTB40Q9NUA8 1239 aa11.39□□□□□ -0.59
TM9SF4-207ENST00000495749 TSPYL4Q9UJ04 414 aa11.39□□□□□ -0.59
TM9SF4-207ENST00000495749 MAP2P11137 1827 aaKnown RBP11.39□□□□□ -0.59
TM9SF4-207ENST00000495749 DLC1Q96QB1 1528 aa11.39□□□□□ -0.59
TM9SF4-207ENST00000495749 IL16Q14005 1332 aa11.38□□□□□ -0.59
TM9SF4-207ENST00000495749 KIF16BQ96L93 1317 aa11.38□□□□□ -0.59
TM9SF4-207ENST00000495749 SLC4A2P04920 1241 aa11.38□□□□□ -0.59
TM9SF4-207ENST00000495749 LMTK3Q96Q04 1460 aa11.38□□□□□ -0.59
TM9SF4-207ENST00000495749 CT47B1P0C2W7 299 aaPredicted RBP11.38□□□□□ -0.59
TM9SF4-207ENST00000495749 MCM4P33991 863 aa11.38□□□□□ -0.59
TM9SF4-207ENST00000495749 HSPA2P54652 639 aa11.38□□□□□ -0.59
TM9SF4-207ENST00000495749 CALD1Q05682 793 aaKnown RBP11.38□□□□□ -0.59
TM9SF4-207ENST00000495749 HDAC1Q13547 482 aaPredicted RBP11.38□□□□□ -0.59
TM9SF4-207ENST00000495749 L1TD1Q5T7N2 865 aaKnown RBP11.38□□□□□ -0.59
TM9SF4-207ENST00000495749 G2E3Q7L622 706 aa11.38□□□□□ -0.59
TM9SF4-207ENST00000495749 LMOD3Q0VAK6 560 aa11.37□□□□□ -0.59
TM9SF4-207ENST00000495749 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
TM9SF4-207ENST00000495749 USP32Q8NFA0 1604 aa11.37□□□□□ -0.59
TM9SF4-207ENST00000495749 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.37□□□□□ -0.59
TM9SF4-207ENST00000495749 PROSER2Q86WR7 435 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms