RNA–Protein interactions for RNA: ENST00000494829.1

RUNX1-217, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 3,622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-217ENST00000494829 PTCH1Q13635 1447 aa7.47□□□□□ -1.21
RUNX1-217ENST00000494829 PLEKHG3A1L390 1219 aa7.46□□□□□ -1.21
RUNX1-217ENST00000494829 EIF4A2Q14240 407 aaKnown RBP7.46□□□□□ -1.21
RUNX1-217ENST00000494829 NUTM2GQ5VZR2 741 aa7.46□□□□□ -1.21
RUNX1-217ENST00000494829 SSH1Q8WYL5 1049 aa7.46□□□□□ -1.21
RUNX1-217ENST00000494829 TBX22Q9Y458 520 aa7.46□□□□□ -1.21
RUNX1-217ENST00000494829 CHD2O14647 1828 aaKnown RBP7.46□□□□□ -1.21
RUNX1-217ENST00000494829 AATKQ6ZMQ8 1374 aa7.46□□□□□ -1.21
RUNX1-217ENST00000494829 FMN2Q9NZ56 1722 aa7.46□□□□□ -1.22
RUNX1-217ENST00000494829 TCERG1O14776 1098 aaKnown RBP7.45□□□□□ -1.22
RUNX1-217ENST00000494829 PDE4AP27815 886 aa7.45□□□□□ -1.22
RUNX1-217ENST00000494829 ZNF219Q9P2Y4 722 aaPredicted RBP7.45□□□□□ -1.22
RUNX1-217ENST00000494829 ZNF142P52746 1687 aaPredicted RBP7.45□□□□□ -1.22
RUNX1-217ENST00000494829 KRT24Q2M2I5 525 aa7.45□□□□□ -1.22
RUNX1-217ENST00000494829 COG3Q96JB2 828 aa7.45□□□□□ -1.22
RUNX1-217ENST00000494829 EID1Q9Y6B2 187 aa7.45□□□□□ -1.22
RUNX1-217ENST00000494829 BACH2Q9BYV9 841 aa7.45□□□□□ -1.22
RUNX1-217ENST00000494829 FOXO3O43524 673 aa7.44□□□□□ -1.22
RUNX1-217ENST00000494829 FCHSD2O94868 740 aa7.44□□□□□ -1.22
RUNX1-217ENST00000494829 HDGFP51858 240 aaKnown RBP7.44□□□□□ -1.22
RUNX1-217ENST00000494829 USP31Q70CQ4 1352 aa7.44□□□□□ -1.22
RUNX1-217ENST00000494829 MAP3K19Q56UN5 1328 aa7.44□□□□□ -1.22
RUNX1-217ENST00000494829 TRIM27P14373 513 aa7.44□□□□□ -1.22
RUNX1-217ENST00000494829 THEMISQ8N1K5 641 aaPredicted RBP7.44□□□□□ -1.22
RUNX1-217ENST00000494829 NGEFQ8N5V2 710 aa7.44□□□□□ -1.22
RUNX1-217ENST00000494829 LAS1LQ9Y4W2 734 aaKnown RBP7.44□□□□□ -1.22
RUNX1-217ENST00000494829 MAPK8IP3Q9UPT6 1336 aa7.43□□□□□ -1.22
RUNX1-217ENST00000494829 ELL2O00472 640 aaPredicted RBP7.43□□□□□ -1.22
RUNX1-217ENST00000494829 C8orf34Q49A92 452 aa7.43□□□□□ -1.22
RUNX1-217ENST00000494829 NWD1Q149M9 1564 aa7.43□□□□□ -1.22
RUNX1-217ENST00000494829 NFE2L2Q16236 605 aa7.43□□□□□ -1.22
RUNX1-217ENST00000494829 NOB1Q9ULX3 412 aaKnown RBP7.43□□□□□ -1.22
RUNX1-217ENST00000494829 ZNF853P0CG23 659 aa7.42□□□□□ -1.22
RUNX1-217ENST00000494829 RGS3P49796 1198 aa7.42□□□□□ -1.22
RUNX1-217ENST00000494829 PDE3AQ14432 1141 aa7.42□□□□□ -1.22
RUNX1-217ENST00000494829 SULT6B1Q6IMI4 303 aa7.42□□□□□ -1.22
RUNX1-217ENST00000494829 MBIPQ9NS73 344 aa7.42□□□□□ -1.22
RUNX1-217ENST00000494829 C8orf58Q8NAV2 365 aa7.42□□□□□ -1.22
RUNX1-217ENST00000494829 CENPQQ7L2Z9 268 aaPredicted RBP7.42□□□□□ -1.22
RUNX1-217ENST00000494829 ZNF692Q9BU19 519 aaPredicted RBP7.42□□□□□ -1.22
RUNX1-217ENST00000494829 RGPD2P0DJD1 1756 aa7.42□□□□□ -1.22
RUNX1-217ENST00000494829 SEC24BO95487 1268 aa7.41□□□□□ -1.22
RUNX1-217ENST00000494829 MKRN4PQ13434 485 aaPredicted RBP7.41□□□□□ -1.22
RUNX1-217ENST00000494829 MCM10Q7L590 875 aa7.41□□□□□ -1.22
RUNX1-217ENST00000494829 NPM2Q86SE8 214 aaKnown RBP7.41□□□□□ -1.22
RUNX1-217ENST00000494829 ANP32EQ9BTT0 268 aa7.41□□□□□ -1.22
RUNX1-217ENST00000494829 MYH16Q9H6N6 1097 aa7.41□□□□□ -1.22
RUNX1-217ENST00000494829 STRCP1A6NGW2 1772 aa7.41□□□□□ -1.22
RUNX1-217ENST00000494829 SMC4Q9NTJ3 1288 aa7.41□□□□□ -1.22
RUNX1-217ENST00000494829 VAMP4O75379 141 aa7.41□□□□□ -1.22
RUNX1-217ENST00000494829 TMEM57Q8N5G2 664 aa7.41□□□□□ -1.22
RUNX1-217ENST00000494829 MIS18AQ9NYP9 233 aa7.41□□□□□ -1.22
RUNX1-217ENST00000494829 SETD1BQ9UPS6 1966 aaKnown RBP7.4□□□□□ -1.22
RUNX1-217ENST00000494829 CANXP27824 592 aaKnown RBP7.4□□□□□ -1.22
RUNX1-217ENST00000494829 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.4□□□□□ -1.22
RUNX1-217ENST00000494829 IL16Q14005 1332 aa7.4□□□□□ -1.22
RUNX1-217ENST00000494829 XPCQ01831 940 aaPredicted RBP7.4□□□□□ -1.22
RUNX1-217ENST00000494829 PIK3R4Q99570 1358 aa7.4□□□□□ -1.22
RUNX1-217ENST00000494829 LTN1O94822 1766 aa7.4□□□□□ -1.23
RUNX1-217ENST00000494829 MVPQ14764 893 aaKnown RBP7.4□□□□□ -1.23
RUNX1-217ENST00000494829 NGDNQ8NEJ9 315 aaKnown RBP7.4□□□□□ -1.23
RUNX1-217ENST00000494829 EYA1Q99502 592 aa7.39□□□□□ -1.23
RUNX1-217ENST00000494829 USP54Q70EL1 1684 aa7.39□□□□□ -1.23
RUNX1-217ENST00000494829 PLEKHG5O94827 1062 aa7.39□□□□□ -1.23
RUNX1-217ENST00000494829 USHBP1Q8N6Y0 703 aa7.39□□□□□ -1.23
RUNX1-217ENST00000494829 ORAI2Q96SN7 254 aa7.39□□□□□ -1.23
RUNX1-217ENST00000494829 USP19O94966 1318 aa7.39□□□□□ -1.23
RUNX1-217ENST00000494829 VIRMAQ69YN4 1812 aaKnown RBP7.39□□□□□ -1.23
RUNX1-217ENST00000494829 MTHFSDQ2M296 383 aaKnown RBP7.39□□□□□ -1.23
RUNX1-217ENST00000494829 MRPL50Q8N5N7 158 aaKnown RBP7.39□□□□□ -1.23
RUNX1-217ENST00000494829 CRB1P82279 1406 aa7.38□□□□□ -1.23
RUNX1-217ENST00000494829 ZKSCAN2Q63HK3 967 aa7.38□□□□□ -1.23
RUNX1-217ENST00000494829 ATF7IPQ6VMQ6 1270 aa7.38□□□□□ -1.23
RUNX1-217ENST00000494829 DZIP1LQ8IYY4 767 aaKnown RBP7.38□□□□□ -1.23
RUNX1-217ENST00000494829 MS4A1P11836 297 aa7.38□□□□□ -1.23
RUNX1-217ENST00000494829 DDX17Q92841 729 aaKnown RBP7.38□□□□□ -1.23
RUNX1-217ENST00000494829 C1orf115Q9H7X2 142 aa7.38□□□□□ -1.23
RUNX1-217ENST00000494829 NFAT5O94916 1531 aa7.38□□□□□ -1.23
RUNX1-217ENST00000494829 RGS12O14924 1447 aa7.38□□□□□ -1.23
RUNX1-217ENST00000494829 NLRP6P59044 892 aa7.38□□□□□ -1.23
RUNX1-217ENST00000494829 SLC4A3P48751 1232 aa7.37□□□□□ -1.23
RUNX1-217ENST00000494829 ANKLE2Q86XL3 938 aa7.37□□□□□ -1.23
RUNX1-217ENST00000494829 ANKARQ7Z5J8 1434 aa7.37□□□□□ -1.23
RUNX1-217ENST00000494829 HOXC9P31274 260 aa7.37□□□□□ -1.23
RUNX1-217ENST00000494829 PDZRN3Q9UPQ7 1066 aa7.37□□□□□ -1.23
RUNX1-217ENST00000494829 NPHP4O75161 1426 aaPredicted RBP7.37□□□□□ -1.23
RUNX1-217ENST00000494829 ITPRIPQ8IWB1 547 aa7.37□□□□□ -1.23
RUNX1-217ENST00000494829 SIRT2Q8IXJ6 389 aa7.37□□□□□ -1.23
RUNX1-217ENST00000494829 LTV1Q96GA3 475 aaPredicted RBP7.37□□□□□ -1.23
RUNX1-217ENST00000494829 DNAJC5Q9H3Z4 198 aa7.37□□□□□ -1.23
RUNX1-217ENST00000494829 ZBTB40Q9NUA8 1239 aa7.37□□□□□ -1.23
RUNX1-217ENST00000494829 IFT57Q9NWB7 429 aa7.37□□□□□ -1.23
RUNX1-217ENST00000494829 SBNO1A3KN83 1393 aa7.36□□□□□ -1.23
RUNX1-217ENST00000494829 KDRP35968 1356 aa7.36□□□□□ -1.23
RUNX1-217ENST00000494829 CFAP44Q96MT7 982 aa7.36□□□□□ -1.23
RUNX1-217ENST00000494829 IPO9Q96P70 1041 aaKnown RBP7.36□□□□□ -1.23
RUNX1-217ENST00000494829 IGSF1Q8N6C5 1336 aa7.36□□□□□ -1.23
RUNX1-217ENST00000494829 TTC21AQ8NDW8 1320 aa7.36□□□□□ -1.23
RUNX1-217ENST00000494829 ABTB2Q8N961 1025 aa7.36□□□□□ -1.23
RUNX1-217ENST00000494829 ADGRL3Q9HAR2 1447 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms