RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 PHACTR3Q96KR7 559 aa13.88□□□□□ -0.19
PHACTR4-204ENST00000493669 DNAJC5Q9H3Z4 198 aa13.88□□□□□ -0.19
PHACTR4-204ENST00000493669 SBNO1A3KN83 1393 aa13.88□□□□□ -0.19
PHACTR4-204ENST00000493669 EIF4A2Q14240 407 aaKnown RBP13.88□□□□□ -0.19
PHACTR4-204ENST00000493669 PMFBP1Q8TBY8 1022 aa13.88□□□□□ -0.19
PHACTR4-204ENST00000493669 IFT57Q9NWB7 429 aa13.88□□□□□ -0.19
PHACTR4-204ENST00000493669 ADGRL3Q9HAR2 1447 aa13.88□□□□□ -0.19
PHACTR4-204ENST00000493669 ALDH1L2Q3SY69 923 aa13.87□□□□□ -0.19
PHACTR4-204ENST00000493669 FLT4P35916 1363 aa13.87□□□□□ -0.19
PHACTR4-204ENST00000493669 GNAI1P63096 354 aa13.87□□□□□ -0.19
PHACTR4-204ENST00000493669 PANK1Q8TE04 598 aa13.87□□□□□ -0.19
PHACTR4-204ENST00000493669 ARHGEF10O15013 1369 aa13.87□□□□□ -0.19
PHACTR4-204ENST00000493669 COG6Q9Y2V7 657 aa13.87□□□□□ -0.19
PHACTR4-204ENST00000493669 NWD1Q149M9 1564 aa13.86□□□□□ -0.19
PHACTR4-204ENST00000493669 KIF16BQ96L93 1317 aa13.86□□□□□ -0.19
PHACTR4-204ENST00000493669 BRPF1P55201 1214 aaPredicted RBP13.86□□□□□ -0.19
PHACTR4-204ENST00000493669 SMC4Q9NTJ3 1288 aa13.86□□□□□ -0.19
PHACTR4-204ENST00000493669 DLG5Q8TDM6 1919 aa13.86□□□□□ -0.19
PHACTR4-204ENST00000493669 ZNF853P0CG23 659 aa13.85□□□□□ -0.19
PHACTR4-204ENST00000493669 MAP3K19Q56UN5 1328 aa13.84□□□□□ -0.19
PHACTR4-204ENST00000493669 DZIP1LQ8IYY4 767 aaKnown RBP13.84□□□□□ -0.19
PHACTR4-204ENST00000493669 SSH1Q8WYL5 1049 aa13.84□□□□□ -0.19
PHACTR4-204ENST00000493669 BCL2L13Q9BXK5 485 aa13.84□□□□□ -0.19
PHACTR4-204ENST00000493669 IPO8O15397 1037 aaKnown RBP13.84□□□□□ -0.19
PHACTR4-204ENST00000493669 MVPQ14764 893 aaKnown RBP13.84□□□□□ -0.19
PHACTR4-204ENST00000493669 MARF1Q9Y4F3 1742 aaKnown RBP13.83□□□□□ -0.19
PHACTR4-204ENST00000493669 RLBP1P12271 317 aa13.83□□□□□ -0.2
PHACTR4-204ENST00000493669 PDE4AP27815 886 aa13.83□□□□□ -0.2
PHACTR4-204ENST00000493669 BACH2Q9BYV9 841 aa13.83□□□□□ -0.2
PHACTR4-204ENST00000493669 FTSJ3Q8IY81 847 aaKnown RBP13.83□□□□□ -0.2
PHACTR4-204ENST00000493669 CFAP44Q96MT7 982 aa13.83□□□□□ -0.2
PHACTR4-204ENST00000493669 SULT6B1Q6IMI4 303 aa13.82□□□□□ -0.2
PHACTR4-204ENST00000493669 ATF7IPQ6VMQ6 1270 aa13.82□□□□□ -0.2
PHACTR4-204ENST00000493669 HSP90AB2PQ58FF8 381 aa13.82□□□□□ -0.2
PHACTR4-204ENST00000493669 PHF8Q9UPP1 1060 aa13.82□□□□□ -0.2
PHACTR4-204ENST00000493669 KDRP35968 1356 aa13.82□□□□□ -0.2
PHACTR4-204ENST00000493669 RTL1A6NKG5 1358 aa13.81□□□□□ -0.2
PHACTR4-204ENST00000493669 ANP32AP39687 249 aaKnown RBP13.81□□□□□ -0.2
PHACTR4-204ENST00000493669 NLRP6P59044 892 aa13.81□□□□□ -0.2
PHACTR4-204ENST00000493669 DDX19BQ9UMR2 479 aa13.8□□□□□ -0.2
PHACTR4-204ENST00000493669 TRIM27P14373 513 aa13.8□□□□□ -0.2
PHACTR4-204ENST00000493669 IGSF1Q8N6C5 1336 aa13.8□□□□□ -0.2
PHACTR4-204ENST00000493669 AMPHP49418 695 aa13.79□□□□□ -0.2
PHACTR4-204ENST00000493669 AEBP1Q8IUX7 1158 aa13.79□□□□□ -0.2
PHACTR4-204ENST00000493669 HAP1P54257 671 aaPredicted RBP13.79□□□□□ -0.2
PHACTR4-204ENST00000493669 ARHGAP45Q92619 1136 aa13.79□□□□□ -0.2
PHACTR4-204ENST00000493669 MBIPQ9NS73 344 aa13.79□□□□□ -0.2
PHACTR4-204ENST00000493669 VAMP4O75379 141 aa13.79□□□□□ -0.2
PHACTR4-204ENST00000493669 IGHDP01880 384 aa13.79□□□□□ -0.2
PHACTR4-204ENST00000493669 NOB1Q9ULX3 412 aaKnown RBP13.79□□□□□ -0.2
PHACTR4-204ENST00000493669 TNNQ9UQP3 1299 aa13.79□□□□□ -0.2
PHACTR4-204ENST00000493669 RWDD1Q9H446 243 aaPredicted RBP13.78□□□□□ -0.2
PHACTR4-204ENST00000493669 LAS1LQ9Y4W2 734 aaKnown RBP13.78□□□□□ -0.2
PHACTR4-204ENST00000493669 THUMPD2Q9BTF0 503 aaKnown RBP13.78□□□□□ -0.2
PHACTR4-204ENST00000493669 ABTB2Q8N961 1025 aa13.77□□□□□ -0.2
PHACTR4-204ENST00000493669 MSH5O43196 834 aa13.77□□□□□ -0.21
PHACTR4-204ENST00000493669 CHMP4BQ9H444 224 aaKnown RBP13.77□□□□□ -0.21
PHACTR4-204ENST00000493669 HOXC9P31274 260 aa13.76□□□□□ -0.21
PHACTR4-204ENST00000493669 PCDHB15Q9Y5E8 787 aa13.76□□□□□ -0.21
PHACTR4-204ENST00000493669 PHRF1Q9P1Y6 1649 aaKnown RBP13.76□□□□□ -0.21
PHACTR4-204ENST00000493669 SOX12O15370 315 aa13.76□□□□□ -0.21
PHACTR4-204ENST00000493669 FAM161AQ3B820 660 aa13.76□□□□□ -0.21
PHACTR4-204ENST00000493669 KIAA0232Q92628 1395 aa13.76□□□□□ -0.21
PHACTR4-204ENST00000493669 TWISTNBQ3B726 338 aaPredicted RBP13.75□□□□□ -0.21
PHACTR4-204ENST00000493669 MRPL50Q8N5N7 158 aaKnown RBP13.75□□□□□ -0.21
PHACTR4-204ENST00000493669 GAS2L2Q8NHY3 880 aa13.75□□□□□ -0.21
PHACTR4-204ENST00000493669 NFAT5O94916 1531 aa13.75□□□□□ -0.21
PHACTR4-204ENST00000493669 KIF1AQ12756 1690 aa13.75□□□□□ -0.21
PHACTR4-204ENST00000493669 CHL1O00533 1208 aa13.75□□□□□ -0.21
PHACTR4-204ENST00000493669 HTATSF1O43719 755 aaKnown RBP13.75□□□□□ -0.21
PHACTR4-204ENST00000493669 EYA1Q99502 592 aa13.75□□□□□ -0.21
PHACTR4-204ENST00000493669 FAM83GA6ND36 823 aa13.74□□□□□ -0.21
PHACTR4-204ENST00000493669 ITPRIPQ8IWB1 547 aa13.74□□□□□ -0.21
PHACTR4-204ENST00000493669 IPO9Q96P70 1041 aaKnown RBP13.74□□□□□ -0.21
PHACTR4-204ENST00000493669 ANP32EQ9BTT0 268 aa13.74□□□□□ -0.21
PHACTR4-204ENST00000493669 CRB1P82279 1406 aa13.74□□□□□ -0.21
PHACTR4-204ENST00000493669 PAK3O75914 559 aaPredicted RBP13.74□□□□□ -0.21
PHACTR4-204ENST00000493669 HDAC1Q13547 482 aaPredicted RBP13.74□□□□□ -0.21
PHACTR4-204ENST00000493669 KCNH5Q8NCM2 988 aa13.74□□□□□ -0.21
PHACTR4-204ENST00000493669 ESCO1Q5FWF5 840 aa13.73□□□□□ -0.21
PHACTR4-204ENST00000493669 SKAP1Q86WV1 359 aa13.73□□□□□ -0.21
PHACTR4-204ENST00000493669 NCOA3Q9Y6Q9 1424 aa13.73□□□□□ -0.21
PHACTR4-204ENST00000493669 TMEM57Q8N5G2 664 aa13.73□□□□□ -0.21
PHACTR4-204ENST00000493669 TSPYL6Q8N831 410 aa13.73□□□□□ -0.21
PHACTR4-204ENST00000493669 LTN1O94822 1766 aa13.73□□□□□ -0.21
PHACTR4-204ENST00000493669 PSME1Q06323 249 aa13.72□□□□□ -0.21
PHACTR4-204ENST00000493669 C14orf37Q86TY3 774 aa13.72□□□□□ -0.21
PHACTR4-204ENST00000493669 ZBTB40Q9NUA8 1239 aa13.72□□□□□ -0.21
PHACTR4-204ENST00000493669 LRRC37A3O60309 1634 aa13.72□□□□□ -0.21
PHACTR4-204ENST00000493669 DCTN1Q14203 1278 aa13.72□□□□□ -0.21
PHACTR4-204ENST00000493669 C8orf58Q8NAV2 365 aa13.72□□□□□ -0.21
PHACTR4-204ENST00000493669 API5Q9BZZ5 524 aaKnown RBP13.72□□□□□ -0.21
PHACTR4-204ENST00000493669 MST1RQ04912 1400 aa13.72□□□□□ -0.21
PHACTR4-204ENST00000493669 SLIT3O75094 1523 aa13.71□□□□□ -0.21
PHACTR4-204ENST00000493669 RGS3P49796 1198 aa13.71□□□□□ -0.21
PHACTR4-204ENST00000493669 ERICH6Q7L0X2 663 aa13.71□□□□□ -0.21
PHACTR4-204ENST00000493669 RTF1Q92541 710 aaKnown RBP13.71□□□□□ -0.21
PHACTR4-204ENST00000493669 IP6K1Q92551 441 aa13.71□□□□□ -0.21
PHACTR4-204ENST00000493669 VIRMAQ69YN4 1812 aaKnown RBP13.71□□□□□ -0.21
PHACTR4-204ENST00000493669 ABCC4O15439 1325 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms