RNA–Protein interactions for RNA: ENST00000493486.1

LCOR-208, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

TSL 3

Gene LCOR, Length 245 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-208ENST00000493486 AFAP1Q8N556 730 aa5.65□□□□□ -1.5
LCOR-208ENST00000493486 RIMS1Q86UR5 1692 aaKnown RBP5.65□□□□□ -1.51
LCOR-208ENST00000493486 PTPRMP28827 1452 aa5.64□□□□□ -1.51
LCOR-208ENST00000493486 TIAM1Q13009 1591 aa5.64□□□□□ -1.51
LCOR-208ENST00000493486 TESPA1A2RU30 521 aaPredicted RBP5.64□□□□□ -1.51
LCOR-208ENST00000493486 J3QL48 77 aa5.64□□□□□ -1.51
LCOR-208ENST00000493486 SNRPBP14678 240 aaKnown RBP5.64□□□□□ -1.51
LCOR-208ENST00000493486 SMCPP49901 116 aaPredicted RBP5.64□□□□□ -1.51
LCOR-208ENST00000493486 TRIM32Q13049 653 aa5.63□□□□□ -1.51
LCOR-208ENST00000493486 LCE2CQ5TA81 110 aa5.63□□□□□ -1.51
LCOR-208ENST00000493486 SULF1Q8IWU6 871 aa5.63□□□□□ -1.51
LCOR-208ENST00000493486 SNIP1Q8TAD8 396 aaKnown RBP5.63□□□□□ -1.51
LCOR-208ENST00000493486 MRGPRX2Q96LB1 330 aa5.63□□□□□ -1.51
LCOR-208ENST00000493486 ATP13A2Q9NQ11 1180 aa5.63□□□□□ -1.51
LCOR-208ENST00000493486 SALL2Q9Y467 1007 aaPredicted RBP5.63□□□□□ -1.51
LCOR-208ENST00000493486 ZNF644Q9H582 1327 aaPredicted RBP5.63□□□□□ -1.51
LCOR-208ENST00000493486 SYCP2Q9BX26 1530 aa5.63□□□□□ -1.51
LCOR-208ENST00000493486 WNT7AO00755 349 aa5.62□□□□□ -1.51
LCOR-208ENST00000493486 MSS51Q4VC12 460 aa5.62□□□□□ -1.51
LCOR-208ENST00000493486 MAGI2Q86UL8 1455 aa5.62□□□□□ -1.51
LCOR-208ENST00000493486 FER1L4A9Z1Z3 1794 aa5.62□□□□□ -1.51
LCOR-208ENST00000493486 ATP10AO60312 1499 aa5.61□□□□□ -1.51
LCOR-208ENST00000493486 KANK4Q5T7N3 995 aaPredicted RBP5.61□□□□□ -1.51
LCOR-208ENST00000493486 EFCAB2Q5VUJ9 269 aa5.61□□□□□ -1.51
LCOR-208ENST00000493486 ZNF518AQ6AHZ1 1483 aa5.61□□□□□ -1.51
LCOR-208ENST00000493486 SMYD5Q6GMV2 418 aa5.61□□□□□ -1.51
LCOR-208ENST00000493486 HPS1Q92902 700 aa5.61□□□□□ -1.51
LCOR-208ENST00000493486 LMTK3Q96Q04 1460 aa5.61□□□□□ -1.51
LCOR-208ENST00000493486 MLH3Q9UHC1 1453 aa5.61□□□□□ -1.51
LCOR-208ENST00000493486 INO80Q9ULG1 1556 aaPredicted RBP5.61□□□□□ -1.51
LCOR-208ENST00000493486 REREQ9P2R6 1566 aa5.6□□□□□ -1.51
LCOR-208ENST00000493486 EHBP1L1Q8N3D4 1523 aa5.6□□□□□ -1.51
LCOR-208ENST00000493486 MBD5Q9P267 1494 aa5.6□□□□□ -1.51
LCOR-208ENST00000493486 HNRNPMP52272 730 aaKnown RBP eCLIP5.6□□□□□ -1.515e-6■■■■■ 27.2
LCOR-208ENST00000493486 STK17AQ9UEE5 414 aa5.6□□□□□ -1.51
LCOR-208ENST00000493486 PLXNC1O60486 1568 aa5.59□□□□□ -1.51
LCOR-208ENST00000493486 NCOA2Q15596 1464 aa5.59□□□□□ -1.51
LCOR-208ENST00000493486 C9orf84Q5VXU9 1444 aa5.59□□□□□ -1.51
LCOR-208ENST00000493486 VPS8Q8N3P4 1428 aa5.59□□□□□ -1.51
LCOR-208ENST00000493486 TERTO14746 1132 aaKnown RBP5.59□□□□□ -1.51
LCOR-208ENST00000493486 WIPF1O43516 503 aa5.59□□□□□ -1.51
LCOR-208ENST00000493486 MMP16P51512 607 aa5.59□□□□□ -1.51
LCOR-208ENST00000493486 MLECQ14165 292 aa5.59□□□□□ -1.51
LCOR-208ENST00000493486 Q3C1V9 767 aa5.59□□□□□ -1.51
LCOR-208ENST00000493486 GRIPAP1Q4V328 841 aa5.59□□□□□ -1.51
LCOR-208ENST00000493486 CCDC24Q8N4L8 307 aa5.59□□□□□ -1.51
LCOR-208ENST00000493486 HLA-CQ95604 372 aa5.59□□□□□ -1.51
LCOR-208ENST00000493486 TRIM47Q96LD4 638 aa5.59□□□□□ -1.51
LCOR-208ENST00000493486 CDK11AQ9UQ88 783 aaPredicted RBP5.59□□□□□ -1.51
LCOR-208ENST00000493486 SUPT6HQ7KZ85 1726 aaKnown RBP5.59□□□□□ -1.51
LCOR-208ENST00000493486 C3P01024 1663 aa5.59□□□□□ -1.52
LCOR-208ENST00000493486 ADGBQ8N7X0 1667 aa5.59□□□□□ -1.52
LCOR-208ENST00000493486 LRRC9Q6ZRR7 1453 aa5.58□□□□□ -1.52
LCOR-208ENST00000493486 ARID4BQ4LE39 1312 aaPredicted RBP5.58□□□□□ -1.52
LCOR-208ENST00000493486 CEBPAP49715 358 aaPredicted RBP5.58□□□□□ -1.52
LCOR-208ENST00000493486 INSM1Q01101 510 aaPredicted RBP5.58□□□□□ -1.52
LCOR-208ENST00000493486 USB1Q9BQ65 265 aaKnown RBP5.58□□□□□ -1.52
LCOR-208ENST00000493486 ZNF777Q9ULD5 760 aaPredicted RBP5.58□□□□□ -1.52
LCOR-208ENST00000493486 AGLP35573 1532 aa5.58□□□□□ -1.52
LCOR-208ENST00000493486 ATP7AQ04656 1500 aa5.58□□□□□ -1.52
LCOR-208ENST00000493486 KIAA1107Q9UPP5 1409 aa5.57□□□□□ -1.52
LCOR-208ENST00000493486 MTUS2Q5JR59 1369 aa5.57□□□□□ -1.52
LCOR-208ENST00000493486 DXOO77932 396 aaKnown RBP5.57□□□□□ -1.52
LCOR-208ENST00000493486 SKOR1P84550 965 aa5.57□□□□□ -1.52
LCOR-208ENST00000493486 RC3H1Q5TC82 1133 aaKnown RBP5.57□□□□□ -1.52
LCOR-208ENST00000493486 GPIHBP1Q8IV16 184 aa5.57□□□□□ -1.52
LCOR-208ENST00000493486 SENP2Q9HC62 589 aa5.57□□□□□ -1.52
LCOR-208ENST00000493486 CAMSAP2Q08AD1 1489 aa5.57□□□□□ -1.52
LCOR-208ENST00000493486 CCNB3Q8WWL7 1395 aa5.56□□□□□ -1.52
LCOR-208ENST00000493486 ALDH1A1P00352 501 aa5.56□□□□□ -1.52
LCOR-208ENST00000493486 CD46P15529 392 aa5.56□□□□□ -1.52
LCOR-208ENST00000493486 HSPA2P54652 639 aa5.56□□□□□ -1.52
LCOR-208ENST00000493486 CFDP1Q9UEE9 299 aaPredicted RBP5.56□□□□□ -1.52
LCOR-208ENST00000493486 STRCQ7RTU9 1775 aa5.56□□□□□ -1.52
LCOR-208ENST00000493486 CLTCQ00610 1675 aaKnown RBP5.56□□□□□ -1.52
LCOR-208ENST00000493486 MAP3K1Q13233 1512 aa5.55□□□□□ -1.52
LCOR-208ENST00000493486 KDM4AO75164 1064 aa5.55□□□□□ -1.52
LCOR-208ENST00000493486 GUCA2AQ02747 115 aa5.55□□□□□ -1.52
LCOR-208ENST00000493486 REPIN1Q9BWE0 567 aaKnown RBP5.55□□□□□ -1.52
LCOR-208ENST00000493486 PREX1Q8TCU6 1659 aa5.55□□□□□ -1.52
LCOR-208ENST00000493486 A2MP01023 1474 aa5.54□□□□□ -1.52
LCOR-208ENST00000493486 MDM2Q00987 491 aaPredicted RBP5.54□□□□□ -1.52
LCOR-208ENST00000493486 SYMPKQ92797 1274 aaKnown RBP5.54□□□□□ -1.52
LCOR-208ENST00000493486 MROH1Q8NDA8 1641 aa5.54□□□□□ -1.52
LCOR-208ENST00000493486 ARHGEF5Q12774 1597 aa5.54□□□□□ -1.52
LCOR-208ENST00000493486 SPAG9O60271 1321 aaKnown RBP5.53□□□□□ -1.52
LCOR-208ENST00000493486 PLEKHH2Q8IVE3 1493 aa5.53□□□□□ -1.52
LCOR-208ENST00000493486 BMP1P13497 986 aa5.53□□□□□ -1.52
LCOR-208ENST00000493486 WNT7BP56706 349 aa5.53□□□□□ -1.52
LCOR-208ENST00000493486 KIFC2Q96AC6 838 aa5.53□□□□□ -1.52
LCOR-208ENST00000493486 MROH2AA6NES4 1674 aa5.53□□□□□ -1.52
LCOR-208ENST00000493486 CCDC141Q6ZP82 1450 aa5.52□□□□□ -1.53
LCOR-208ENST00000493486 MAST1Q9Y2H9 1570 aa5.52□□□□□ -1.53
LCOR-208ENST00000493486 HOXA2O43364 376 aa5.52□□□□□ -1.53
LCOR-208ENST00000493486 VEGFBP49765 207 aa5.52□□□□□ -1.53
LCOR-208ENST00000493486 PTCRAQ6ISU1 281 aaPredicted RBP5.52□□□□□ -1.53
LCOR-208ENST00000493486 CROCC2H7BZ55 1655 aa5.52□□□□□ -1.53
LCOR-208ENST00000493486 RTEL1-TNFRSF6BF6WH68 1400 aa5.51□□□□□ -1.53
LCOR-208ENST00000493486 MYOM3Q5VTT5 1437 aa5.51□□□□□ -1.53
LCOR-208ENST00000493486 GMPRP36959 345 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms