RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 NUDT7P0C024 238 aa10.77□□□□□ -0.69
SPTA1-208ENST00000492934 NGLY1Q96IV0 654 aa10.77□□□□□ -0.69
SPTA1-208ENST00000492934 QTRT2Q9H974 415 aaKnown RBP10.77□□□□□ -0.69
SPTA1-208ENST00000492934 NPHP3Q7Z494 1330 aa10.77□□□□□ -0.69
SPTA1-208ENST00000492934 ADGRF5Q8IZF2 1346 aa10.77□□□□□ -0.69
SPTA1-208ENST00000492934 ANKRD30BQ9BXX2 1392 aa10.77□□□□□ -0.69
SPTA1-208ENST00000492934 POTEEQ6S8J3 1075 aa10.76□□□□□ -0.69
SPTA1-208ENST00000492934 LRPPRCP42704 1394 aaKnown RBP10.76□□□□□ -0.69
SPTA1-208ENST00000492934 KIF1AQ12756 1690 aa10.76□□□□□ -0.69
SPTA1-208ENST00000492934 FMN2Q9NZ56 1722 aa10.75□□□□□ -0.69
SPTA1-208ENST00000492934 RGL3Q3MIN7 710 aa10.75□□□□□ -0.69
SPTA1-208ENST00000492934 ESCO1Q5FWF5 840 aa10.75□□□□□ -0.69
SPTA1-208ENST00000492934 STK26Q9P289 416 aa10.75□□□□□ -0.69
SPTA1-208ENST00000492934 USP21Q9UK80 565 aa10.75□□□□□ -0.69
SPTA1-208ENST00000492934 LHX6Q9UPM6 363 aa10.75□□□□□ -0.69
SPTA1-208ENST00000492934 ATAD2Q6PL18 1390 aa10.75□□□□□ -0.69
SPTA1-208ENST00000492934 ATRNO75882 1429 aa10.75□□□□□ -0.69
SPTA1-208ENST00000492934 KIF3CO14782 793 aa10.74□□□□□ -0.69
SPTA1-208ENST00000492934 XPCQ01831 940 aaPredicted RBP10.74□□□□□ -0.69
SPTA1-208ENST00000492934 AXIN2Q9Y2T1 843 aa10.74□□□□□ -0.69
SPTA1-208ENST00000492934 MARF1Q9Y4F3 1742 aaKnown RBP10.74□□□□□ -0.69
SPTA1-208ENST00000492934 PLEKHH1Q9ULM0 1364 aa10.74□□□□□ -0.69
SPTA1-208ENST00000492934 YTHDC2Q9H6S0 1430 aaKnown RBP10.74□□□□□ -0.69
SPTA1-208ENST00000492934 NUTM2FA1L443 756 aa10.73□□□□□ -0.69
SPTA1-208ENST00000492934 FBXO22Q8NEZ5 403 aa10.73□□□□□ -0.69
SPTA1-208ENST00000492934 TRPC5Q9UL62 973 aaPredicted RBP10.73□□□□□ -0.69
SPTA1-208ENST00000492934 FOXO3O43524 673 aa10.72□□□□□ -0.69
SPTA1-208ENST00000492934 WAPLQ7Z5K2 1190 aa10.72□□□□□ -0.69
SPTA1-208ENST00000492934 HS6ST3Q8IZP7 471 aa10.72□□□□□ -0.69
SPTA1-208ENST00000492934 MPHOSPH9Q99550 1183 aa10.72□□□□□ -0.69
SPTA1-208ENST00000492934 ABCC11Q96J66 1382 aa10.72□□□□□ -0.69
SPTA1-208ENST00000492934 USP32Q8NFA0 1604 aa10.72□□□□□ -0.69
SPTA1-208ENST00000492934 C2orf72A6NCS6 295 aa10.71□□□□□ -0.69
SPTA1-208ENST00000492934 SLC34A2O95436 690 aa10.71□□□□□ -0.69
SPTA1-208ENST00000492934 TMEM132EQ6IEE7 984 aa10.71□□□□□ -0.69
SPTA1-208ENST00000492934 FNBP4Q8N3X1 1017 aaPredicted RBP10.71□□□□□ -0.69
SPTA1-208ENST00000492934 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.71□□□□□ -0.69
SPTA1-208ENST00000492934 EP400Q96L91 3159 aa10.7□□□□□ -0.7
SPTA1-208ENST00000492934 BCL9LQ86UU0 1499 aa10.7□□□□□ -0.7
SPTA1-208ENST00000492934 NRXN1Q9ULB1 1477 aa10.7□□□□□ -0.7
SPTA1-208ENST00000492934 PCDHGA4Q9Y5G9 962 aa10.7□□□□□ -0.7
SPTA1-208ENST00000492934 TNS3Q68CZ2 1445 aa10.69□□□□□ -0.7
SPTA1-208ENST00000492934 AMER1Q5JTC6 1135 aaPredicted RBP10.69□□□□□ -0.7
SPTA1-208ENST00000492934 ADGRD1Q6QNK2 874 aa10.69□□□□□ -0.7
SPTA1-208ENST00000492934 ABCA3Q99758 1704 aa10.69□□□□□ -0.7
SPTA1-208ENST00000492934 ADGRB2O60241 1585 aa10.68□□□□□ -0.7
SPTA1-208ENST00000492934 GLI3P10071 1580 aa10.68□□□□□ -0.7
SPTA1-208ENST00000492934 PLCH1Q4KWH8 1693 aa10.67□□□□□ -0.7
SPTA1-208ENST00000492934 SPATA31A3Q5VYP0 1347 aa10.67□□□□□ -0.7
SPTA1-208ENST00000492934 ARHGAP33O14559 1287 aa10.67□□□□□ -0.7
SPTA1-208ENST00000492934 MFRPQ9BY79 579 aa10.67□□□□□ -0.7
SPTA1-208ENST00000492934 SLIT2O94813 1529 aa10.67□□□□□ -0.7
SPTA1-208ENST00000492934 DLC1Q96QB1 1528 aa10.67□□□□□ -0.7
SPTA1-208ENST00000492934 RALGAPBQ86X10 1494 aa10.67□□□□□ -0.7
SPTA1-208ENST00000492934 DHX57Q6P158 1386 aaKnown RBP10.66□□□□□ -0.7
SPTA1-208ENST00000492934 HAP1P54257 671 aaPredicted RBP10.66□□□□□ -0.7
SPTA1-208ENST00000492934 SAFB2Q14151 953 aaKnown RBP eCLIP10.66□□□□□ -0.7
SPTA1-208ENST00000492934 SRCAPQ6ZRS2 3230 aa10.65□□□□□ -0.7
SPTA1-208ENST00000492934 RAB3GAP2Q9H2M9 1393 aa10.65□□□□□ -0.7
SPTA1-208ENST00000492934 CFAP70Q5T0N1 1121 aa10.65□□□□□ -0.7
SPTA1-208ENST00000492934 PRAM1Q96QH2 718 aa10.65□□□□□ -0.7
SPTA1-208ENST00000492934 C14orf93Q9H972 538 aaKnown RBP10.65□□□□□ -0.7
SPTA1-208ENST00000492934 ANKARQ7Z5J8 1434 aa10.65□□□□□ -0.7
SPTA1-208ENST00000492934 RGPD8O14715 1765 aaPredicted RBP10.65□□□□□ -0.71
SPTA1-208ENST00000492934 ADGRB1O14514 1584 aa10.65□□□□□ -0.71
SPTA1-208ENST00000492934 ACIN1Q9UKV3 1341 aaKnown RBP10.64□□□□□ -0.71
SPTA1-208ENST00000492934 PSDA5PKW4 1024 aaPredicted RBP10.64□□□□□ -0.71
SPTA1-208ENST00000492934 KRT28Q7Z3Y7 464 aa10.64□□□□□ -0.71
SPTA1-208ENST00000492934 GJD4Q96KN9 370 aaPredicted RBP10.64□□□□□ -0.71
SPTA1-208ENST00000492934 NWD2Q9ULI1 1742 aa10.64□□□□□ -0.71
SPTA1-208ENST00000492934 ARHGEF10O15013 1369 aa10.64□□□□□ -0.71
SPTA1-208ENST00000492934 TK2O00142 265 aa10.63□□□□□ -0.71
SPTA1-208ENST00000492934 UNC5CLQ8IV45 518 aa10.63□□□□□ -0.71
SPTA1-208ENST00000492934 SIRT1Q96EB6 747 aa10.63□□□□□ -0.71
SPTA1-208ENST00000492934 SBNO1A3KN83 1393 aa10.63□□□□□ -0.71
SPTA1-208ENST00000492934 LMOD2Q6P5Q4 547 aa10.62□□□□□ -0.71
SPTA1-208ENST00000492934 RYDENQ9NUL5 291 aaKnown RBP10.62□□□□□ -0.71
SPTA1-208ENST00000492934 POGKQ9P215 609 aa10.62□□□□□ -0.71
SPTA1-208ENST00000492934 TULP4Q9NRJ4 1543 aa10.62□□□□□ -0.71
SPTA1-208ENST00000492934 EIF3AQ14152 1382 aaKnown RBP10.62□□□□□ -0.71
SPTA1-208ENST00000492934 TRPM3Q9HCF6 1732 aaPredicted RBP10.61□□□□□ -0.71
SPTA1-208ENST00000492934 BLMP54132 1417 aaPredicted RBP10.61□□□□□ -0.71
SPTA1-208ENST00000492934 PSME1Q06323 249 aa10.61□□□□□ -0.71
SPTA1-208ENST00000492934 CABLES1Q8TDN4 633 aa10.61□□□□□ -0.71
SPTA1-208ENST00000492934 NRAPQ86VF7 1730 aa10.61□□□□□ -0.71
SPTA1-208ENST00000492934 HRO43593 1189 aa10.6□□□□□ -0.71
SPTA1-208ENST00000492934 TMC2Q8TDI7 906 aa10.6□□□□□ -0.71
SPTA1-208ENST00000492934 HIRIP3Q9BW71 556 aaPredicted RBP10.6□□□□□ -0.71
SPTA1-208ENST00000492934 CCDC9Q9Y3X0 531 aaKnown RBP10.6□□□□□ -0.71
SPTA1-208ENST00000492934 ALS2Q96Q42 1657 aa10.6□□□□□ -0.71
SPTA1-208ENST00000492934 BRWD3Q6RI45 1802 aa10.59□□□□□ -0.71
SPTA1-208ENST00000492934 PMFBP1Q8TBY8 1022 aa10.59□□□□□ -0.71
SPTA1-208ENST00000492934 TRAK1Q9UPV9 953 aa10.59□□□□□ -0.71
SPTA1-208ENST00000492934 MINK1Q8N4C8 1332 aaPredicted RBP10.58□□□□□ -0.71
SPTA1-208ENST00000492934 ARHGEF28Q8N1W1 1705 aaKnown RBP10.58□□□□□ -0.72
SPTA1-208ENST00000492934 COL14A1Q05707 1796 aaKnown RBP10.58□□□□□ -0.72
SPTA1-208ENST00000492934 GPRASP1Q5JY77 1395 aa10.58□□□□□ -0.72
SPTA1-208ENST00000492934 A0A0G2JS52 829 aa10.58□□□□□ -0.72
SPTA1-208ENST00000492934 MYT1Q01538 1121 aa10.58□□□□□ -0.72
SPTA1-208ENST00000492934 VPS72Q15906 364 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms