RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 MST1RQ04912 1400 aa11.93□□□□□ -0.5
SMARCC1-208ENST00000492896 RTL1A6NKG5 1358 aa11.92□□□□□ -0.5
SMARCC1-208ENST00000492896 ARHGEF10O15013 1369 aa11.92□□□□□ -0.5
SMARCC1-208ENST00000492896 SLIT3O75094 1523 aa11.92□□□□□ -0.5
SMARCC1-208ENST00000492896 SOX12O15370 315 aa11.92□□□□□ -0.5
SMARCC1-208ENST00000492896 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
SMARCC1-208ENST00000492896 HMOX1P09601 288 aa11.92□□□□□ -0.5
SMARCC1-208ENST00000492896 ABTB2Q8N961 1025 aa11.92□□□□□ -0.5
SMARCC1-208ENST00000492896 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.92□□□□□ -0.5
SMARCC1-208ENST00000492896 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
SMARCC1-208ENST00000492896 IL16Q14005 1332 aa11.91□□□□□ -0.5
SMARCC1-208ENST00000492896 RIPK4P57078 832 aa11.91□□□□□ -0.5
SMARCC1-208ENST00000492896 PSME1Q06323 249 aa11.91□□□□□ -0.5
SMARCC1-208ENST00000492896 NFE2L2Q16236 605 aa11.91□□□□□ -0.5
SMARCC1-208ENST00000492896 TRIM35Q9UPQ4 493 aa11.91□□□□□ -0.5
SMARCC1-208ENST00000492896 ATF3P18847 181 aa11.9□□□□□ -0.5
SMARCC1-208ENST00000492896 AMPHP49418 695 aa11.9□□□□□ -0.5
SMARCC1-208ENST00000492896 MSH6P52701 1360 aa11.9□□□□□ -0.5
SMARCC1-208ENST00000492896 LMOD3Q0VAK6 560 aa11.89□□□□□ -0.51
SMARCC1-208ENST00000492896 HSP90AB2PQ58FF8 381 aa11.89□□□□□ -0.51
SMARCC1-208ENST00000492896 NUTM2GQ5VZR2 741 aa11.89□□□□□ -0.51
SMARCC1-208ENST00000492896 B4GALNT3Q6L9W6 998 aa11.89□□□□□ -0.51
SMARCC1-208ENST00000492896 ORAI2Q96SN7 254 aa11.89□□□□□ -0.51
SMARCC1-208ENST00000492896 FANCIQ9NVI1 1328 aa11.88□□□□□ -0.51
SMARCC1-208ENST00000492896 RGPD2P0DJD1 1756 aa11.87□□□□□ -0.51
SMARCC1-208ENST00000492896 PLIN1O60240 522 aa11.87□□□□□ -0.51
SMARCC1-208ENST00000492896 CALD1Q05682 793 aaKnown RBP11.87□□□□□ -0.51
SMARCC1-208ENST00000492896 SULT6B1Q6IMI4 303 aa11.87□□□□□ -0.51
SMARCC1-208ENST00000492896 CADPS2Q86UW7 1296 aa11.87□□□□□ -0.51
SMARCC1-208ENST00000492896 KCNH5Q8NCM2 988 aa11.87□□□□□ -0.51
SMARCC1-208ENST00000492896 EXOC6Q8TAG9 804 aa11.87□□□□□ -0.51
SMARCC1-208ENST00000492896 PHACTR3Q96KR7 559 aa11.87□□□□□ -0.51
SMARCC1-208ENST00000492896 CRYBG1Q9Y4K1 1723 aa11.86□□□□□ -0.51
SMARCC1-208ENST00000492896 FOXO3O43524 673 aa11.86□□□□□ -0.51
SMARCC1-208ENST00000492896 CT47B1P0C2W7 299 aaPredicted RBP11.86□□□□□ -0.51
SMARCC1-208ENST00000492896 HOXC9P31274 260 aa11.86□□□□□ -0.51
SMARCC1-208ENST00000492896 AEBP1Q8IUX7 1158 aa11.86□□□□□ -0.51
SMARCC1-208ENST00000492896 CCDC136Q96JN2 1154 aa11.86□□□□□ -0.51
SMARCC1-208ENST00000492896 CRBNQ96SW2 442 aa11.86□□□□□ -0.51
SMARCC1-208ENST00000492896 KDRP35968 1356 aa11.86□□□□□ -0.51
SMARCC1-208ENST00000492896 IGSF1Q8N6C5 1336 aa11.86□□□□□ -0.51
SMARCC1-208ENST00000492896 RGPD5Q99666 1765 aa11.85□□□□□ -0.51
SMARCC1-208ENST00000492896 CAMTA1Q9Y6Y1 1673 aa11.85□□□□□ -0.51
SMARCC1-208ENST00000492896 KRT28Q7Z3Y7 464 aa11.85□□□□□ -0.51
SMARCC1-208ENST00000492896 LRRC37A3O60309 1634 aa11.85□□□□□ -0.51
SMARCC1-208ENST00000492896 USP19O94966 1318 aa11.85□□□□□ -0.51
SMARCC1-208ENST00000492896 XPCQ01831 940 aaPredicted RBP11.84□□□□□ -0.51
SMARCC1-208ENST00000492896 TSR2Q969E8 191 aaKnown RBP11.84□□□□□ -0.51
SMARCC1-208ENST00000492896 MED1Q15648 1581 aaPredicted RBP11.84□□□□□ -0.51
SMARCC1-208ENST00000492896 BCAR3O75815 825 aa11.83□□□□□ -0.52
SMARCC1-208ENST00000492896 CANXP27824 592 aaKnown RBP11.83□□□□□ -0.52
SMARCC1-208ENST00000492896 RARSP54136 660 aaKnown RBP11.83□□□□□ -0.52
SMARCC1-208ENST00000492896 TNS3Q68CZ2 1445 aa11.83□□□□□ -0.52
SMARCC1-208ENST00000492896 VIRMAQ69YN4 1812 aaKnown RBP11.83□□□□□ -0.52
SMARCC1-208ENST00000492896 NPHP3Q7Z494 1330 aa11.83□□□□□ -0.52
SMARCC1-208ENST00000492896 PXDNQ92626 1479 aa11.83□□□□□ -0.52
SMARCC1-208ENST00000492896 FAM208AQ9UK61 1670 aaKnown RBP11.82□□□□□ -0.52
SMARCC1-208ENST00000492896 EXOSC9Q06265 439 aaKnown RBP11.82□□□□□ -0.52
SMARCC1-208ENST00000492896 C20orf194Q5TEA3 1177 aa11.82□□□□□ -0.52
SMARCC1-208ENST00000492896 IP6K1Q92551 441 aa11.82□□□□□ -0.52
SMARCC1-208ENST00000492896 EYA1Q99502 592 aa11.82□□□□□ -0.52
SMARCC1-208ENST00000492896 IFT57Q9NWB7 429 aa11.82□□□□□ -0.52
SMARCC1-208ENST00000492896 ZNF335Q9H4Z2 1342 aaPredicted RBP11.82□□□□□ -0.52
SMARCC1-208ENST00000492896 ABCC6O95255 1503 aa11.81□□□□□ -0.52
SMARCC1-208ENST00000492896 GNAI1P63096 354 aa11.81□□□□□ -0.52
SMARCC1-208ENST00000492896 LMOD2Q6P5Q4 547 aa11.81□□□□□ -0.52
SMARCC1-208ENST00000492896 NHSL1Q5SYE7 1610 aa11.81□□□□□ -0.52
SMARCC1-208ENST00000492896 ABCA3Q99758 1704 aa11.8□□□□□ -0.52
SMARCC1-208ENST00000492896 PDE3AQ14432 1141 aa11.8□□□□□ -0.52
SMARCC1-208ENST00000492896 GAS2L2Q8NHY3 880 aa11.8□□□□□ -0.52
SMARCC1-208ENST00000492896 THUMPD2Q9BTF0 503 aaKnown RBP11.8□□□□□ -0.52
SMARCC1-208ENST00000492896 LAS1LQ9Y4W2 734 aaKnown RBP11.8□□□□□ -0.52
SMARCC1-208ENST00000492896 LMO7Q8WWI1 1683 aa11.8□□□□□ -0.52
SMARCC1-208ENST00000492896 COL18A1P39060 1754 aa11.79□□□□□ -0.52
SMARCC1-208ENST00000492896 ZBTB7CA1YPR0 619 aa11.79□□□□□ -0.52
SMARCC1-208ENST00000492896 GCP02774 474 aa11.79□□□□□ -0.52
SMARCC1-208ENST00000492896 LTV1Q96GA3 475 aaPredicted RBP11.79□□□□□ -0.52
SMARCC1-208ENST00000492896 ZNF853P0CG23 659 aa11.78□□□□□ -0.52
SMARCC1-208ENST00000492896 ARHGEF25Q86VW2 580 aa11.78□□□□□ -0.52
SMARCC1-208ENST00000492896 SMC4Q9NTJ3 1288 aa11.78□□□□□ -0.52
SMARCC1-208ENST00000492896 NCAPD2Q15021 1401 aa11.77□□□□□ -0.52
SMARCC1-208ENST00000492896 FAM83GA6ND36 823 aa11.77□□□□□ -0.53
SMARCC1-208ENST00000492896 FRAT1Q92837 279 aaPredicted RBP11.77□□□□□ -0.53
SMARCC1-208ENST00000492896 ZNF428Q96B54 188 aa11.77□□□□□ -0.53
SMARCC1-208ENST00000492896 CFAP44Q96MT7 982 aa11.77□□□□□ -0.53
SMARCC1-208ENST00000492896 BCL2L13Q9BXK5 485 aa11.77□□□□□ -0.53
SMARCC1-208ENST00000492896 DCTN1Q14203 1278 aa11.76□□□□□ -0.53
SMARCC1-208ENST00000492896 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
SMARCC1-208ENST00000492896 ALDH1L2Q3SY69 923 aa11.76□□□□□ -0.53
SMARCC1-208ENST00000492896 BRINP3Q76B58 766 aa11.76□□□□□ -0.53
SMARCC1-208ENST00000492896 RTF1Q92541 710 aaKnown RBP11.76□□□□□ -0.53
SMARCC1-208ENST00000492896 DDX17Q92841 729 aaKnown RBP11.76□□□□□ -0.53
SMARCC1-208ENST00000492896 MBIPQ9NS73 344 aa11.76□□□□□ -0.53
SMARCC1-208ENST00000492896 KIF16BQ96L93 1317 aa11.76□□□□□ -0.53
SMARCC1-208ENST00000492896 MAP3K5Q99683 1374 aa11.76□□□□□ -0.53
SMARCC1-208ENST00000492896 CRB1P82279 1406 aa11.76□□□□□ -0.53
SMARCC1-208ENST00000492896 HTATSF1O43719 755 aaKnown RBP11.75□□□□□ -0.53
SMARCC1-208ENST00000492896 PLEKHG5O94827 1062 aa11.75□□□□□ -0.53
SMARCC1-208ENST00000492896 MS4A1P11836 297 aa11.75□□□□□ -0.53
SMARCC1-208ENST00000492896 ZKSCAN2Q63HK3 967 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms