RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 GPS2Q13227 327 aa6.42□□□□□ -1.38
FN1-224ENST00000492816 ZNF772Q68DY9 489 aaPredicted RBP6.42□□□□□ -1.38
FN1-224ENST00000492816 FERMT1Q9BQL6 677 aa6.42□□□□□ -1.38
FN1-224ENST00000492816 LRP2BPQ9P2M1 347 aa6.42□□□□□ -1.38
FN1-224ENST00000492816 SEPT11Q9NVA2 429 aaKnown RBP6.42□□□□□ -1.38
FN1-224ENST00000492816 FYCO1Q9BQS8 1478 aa6.42□□□□□ -1.38
FN1-224ENST00000492816 MRC2Q9UBG0 1479 aa6.42□□□□□ -1.38
FN1-224ENST00000492816 ANAPC15P60006 121 aa6.42□□□□□ -1.38
FN1-224ENST00000492816 KMT5BQ4FZB7 885 aa6.42□□□□□ -1.38
FN1-224ENST00000492816 COMMD10Q9Y6G5 202 aa6.42□□□□□ -1.38
FN1-224ENST00000492816 STIM1Q13586 685 aa6.41□□□□□ -1.38
FN1-224ENST00000492816 LDHCP07864 332 aa6.41□□□□□ -1.38
FN1-224ENST00000492816 ZNF530Q6P9A1 599 aaPredicted RBP6.41□□□□□ -1.38
FN1-224ENST00000492816 FHOD3Q2V2M9 1422 aa6.41□□□□□ -1.38
FN1-224ENST00000492816 EZRP15311 586 aaKnown RBP6.41□□□□□ -1.38
FN1-224ENST00000492816 ZHX3Q9H4I2 956 aa6.41□□□□□ -1.38
FN1-224ENST00000492816 ZNF408Q9H9D4 720 aa6.41□□□□□ -1.38
FN1-224ENST00000492816 PSMA5P28066 241 aa6.41□□□□□ -1.38
FN1-224ENST00000492816 SPATA32Q96LK8 384 aa6.41□□□□□ -1.38
FN1-224ENST00000492816 IPO9Q96P70 1041 aaKnown RBP6.41□□□□□ -1.38
FN1-224ENST00000492816 SPTY2D1Q68D10 685 aaPredicted RBP6.41□□□□□ -1.38
FN1-224ENST00000492816 IFIT1P09914 478 aaKnown RBP6.41□□□□□ -1.38
FN1-224ENST00000492816 PDE6BP35913 854 aa6.41□□□□□ -1.38
FN1-224ENST00000492816 OLFM4Q6UX06 510 aa6.41□□□□□ -1.38
FN1-224ENST00000492816 PPP1R42Q7Z4L9 355 aa6.4□□□□□ -1.38
FN1-224ENST00000492816 CCDC69A6NI79 296 aa6.4□□□□□ -1.38
FN1-224ENST00000492816 REC8O95072 547 aa6.4□□□□□ -1.38
FN1-224ENST00000492816 SEPT7Q16181 437 aaKnown RBP6.4□□□□□ -1.38
FN1-224ENST00000492816 CPLX3Q8WVH0 158 aa6.4□□□□□ -1.38
FN1-224ENST00000492816 TNPO1Q92973 898 aaKnown RBP6.4□□□□□ -1.38
FN1-224ENST00000492816 NEFHP12036 1026 aa6.4□□□□□ -1.38
FN1-224ENST00000492816 FAM200AQ8TCP9 573 aa6.4□□□□□ -1.38
FN1-224ENST00000492816 EYA3Q99504 573 aa6.4□□□□□ -1.38
FN1-224ENST00000492816 LRRCC1Q9C099 1032 aa6.4□□□□□ -1.38
FN1-224ENST00000492816 CDC5LQ99459 802 aaKnown RBP6.4□□□□□ -1.39
FN1-224ENST00000492816 IVNS1ABPQ9Y6Y0 642 aa6.4□□□□□ -1.39
FN1-224ENST00000492816 NOL7Q9UMY1 257 aaKnown RBP6.4□□□□□ -1.39
FN1-224ENST00000492816 SLU7O95391 586 aaKnown RBP6.4□□□□□ -1.39
FN1-224ENST00000492816 SPOUT1Q5T280 376 aaKnown RBP6.4□□□□□ -1.39
FN1-224ENST00000492816 ERLIN2O94905 339 aa6.4□□□□□ -1.39
FN1-224ENST00000492816 GSTO1P78417 241 aa6.4□□□□□ -1.39
FN1-224ENST00000492816 MKNK2Q9HBH9 465 aa6.4□□□□□ -1.39
FN1-224ENST00000492816 TDO2P48775 406 aa6.39□□□□□ -1.39
FN1-224ENST00000492816 CCDC96Q2M329 555 aa6.39□□□□□ -1.39
FN1-224ENST00000492816 RUFY1Q96T51 708 aa6.39□□□□□ -1.39
FN1-224ENST00000492816 GTF3C3Q9Y5Q9 886 aa6.39□□□□□ -1.39
FN1-224ENST00000492816 NYXQ9GZU5 481 aa6.39□□□□□ -1.39
FN1-224ENST00000492816 BAG3O95817 575 aa6.39□□□□□ -1.39
FN1-224ENST00000492816 EAPPQ56P03 285 aaPredicted RBP6.39□□□□□ -1.39
FN1-224ENST00000492816 CLASRPQ8N2M8 674 aaKnown RBP6.39□□□□□ -1.39
FN1-224ENST00000492816 LRRC59Q96AG4 307 aaKnown RBP6.39□□□□□ -1.39
FN1-224ENST00000492816 GRIN2BQ13224 1484 aa6.39□□□□□ -1.39
FN1-224ENST00000492816 NBPF3Q9H094 633 aa6.39□□□□□ -1.39
FN1-224ENST00000492816 CCDC87Q9NVE4 849 aa6.39□□□□□ -1.39
FN1-224ENST00000492816 LRRFIP2Q9Y608 721 aaKnown RBP6.39□□□□□ -1.39
FN1-224ENST00000492816 GJA3Q9Y6H8 435 aa6.39□□□□□ -1.39
FN1-224ENST00000492816 PRG4Q92954 1404 aaPredicted RBP6.39□□□□□ -1.39
FN1-224ENST00000492816 ZC3H6P61129 1189 aaKnown RBP6.39□□□□□ -1.39
FN1-224ENST00000492816 DHX37Q8IY37 1157 aaKnown RBP6.39□□□□□ -1.39
FN1-224ENST00000492816 CNTROBQ8N137 903 aa6.39□□□□□ -1.39
FN1-224ENST00000492816 TTC21AQ8NDW8 1320 aa6.39□□□□□ -1.39
FN1-224ENST00000492816 IFT140Q96RY7 1462 aa6.39□□□□□ -1.39
FN1-224ENST00000492816 UBAC1Q9BSL1 405 aa6.39□□□□□ -1.39
FN1-224ENST00000492816 IRX6P78412 446 aaPredicted RBP6.38□□□□□ -1.39
FN1-224ENST00000492816 PRKCSHP14314 528 aaPredicted RBP6.38□□□□□ -1.39
FN1-224ENST00000492816 HMGN5P82970 282 aaKnown RBP6.38□□□□□ -1.39
FN1-224ENST00000492816 AKAP2Q9Y2D5 859 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 CCDC181Q5TID7 509 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 CCDC146Q8IYE0 955 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 SETDB2Q96T68 719 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 PICK1Q9NRD5 415 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 EPRSP07814 1512 aaKnown RBP6.38□□□□□ -1.39
FN1-224ENST00000492816 ELL2O00472 640 aaPredicted RBP6.38□□□□□ -1.39
FN1-224ENST00000492816 SMC2O95347 1197 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 FAM161AQ3B820 660 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 MPRIPQ6WCQ1 1025 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 GIGYF2Q6Y7W6 1299 aaKnown RBP6.38□□□□□ -1.39
FN1-224ENST00000492816 ZBTB33Q86T24 672 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 ZNF444Q8N0Y2 327 aaPredicted RBP6.38□□□□□ -1.39
FN1-224ENST00000492816 GLRX3O76003 335 aaKnown RBP6.38□□□□□ -1.39
FN1-224ENST00000492816 HMGB1P09429 215 aaKnown RBP6.38□□□□□ -1.39
FN1-224ENST00000492816 NBPF6Q5VWK0 638 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 NBPF5PQ86XG9 351 aaPredicted RBP6.38□□□□□ -1.39
FN1-224ENST00000492816 NBPF4Q96M43 638 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 ZGPATQ8N5A5 531 aaKnown RBP6.38□□□□□ -1.39
FN1-224ENST00000492816 SUPT20HQ8NEM7 779 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 TMOD4Q9NZQ9 345 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 GNAI3P08754 354 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 GBP2P32456 591 aaPredicted RBP6.38□□□□□ -1.39
FN1-224ENST00000492816 RIPK4P57078 832 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 SLC26A8Q96RN1 970 aa6.38□□□□□ -1.39
FN1-224ENST00000492816 FSD1Q9BTV5 496 aa6.37□□□□□ -1.39
FN1-224ENST00000492816 TRIM5Q9C035 493 aa6.37□□□□□ -1.39
FN1-224ENST00000492816 CEP126Q9P2H0 1117 aa6.37□□□□□ -1.39
FN1-224ENST00000492816 FAM135AQ9P2D6 1515 aa6.37□□□□□ -1.39
FN1-224ENST00000492816 DISP3Q9P2K9 1392 aa6.37□□□□□ -1.39
FN1-224ENST00000492816 SLC5A1P13866 664 aa6.37□□□□□ -1.39
FN1-224ENST00000492816 FILIP1LQ4L180 1135 aa6.37□□□□□ -1.39
FN1-224ENST00000492816 CDK19Q9BWU1 502 aa6.37□□□□□ -1.39
FN1-224ENST00000492816 AMOTQ4VCS5 1084 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms