RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 ACEP12821 1306 aa16.38■□□□□ 0.21
PRAME-213ENST00000492657 KNDC1Q76NI1 1749 aa16.38■□□□□ 0.21
PRAME-213ENST00000492657 SOX12O15370 315 aa16.38■□□□□ 0.21
PRAME-213ENST00000492657 USP19O94966 1318 aa16.38■□□□□ 0.21
PRAME-213ENST00000492657 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.38■□□□□ 0.21
PRAME-213ENST00000492657 DCTN1Q14203 1278 aa16.37■□□□□ 0.21
PRAME-213ENST00000492657 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
PRAME-213ENST00000492657 AATKQ6ZMQ8 1374 aa16.37■□□□□ 0.21
PRAME-213ENST00000492657 AEBP1Q8IUX7 1158 aa16.37■□□□□ 0.21
PRAME-213ENST00000492657 DAXXQ9UER7 740 aaPredicted RBP16.37■□□□□ 0.21
PRAME-213ENST00000492657 MON2Q7Z3U7 1717 aa16.37■□□□□ 0.21
PRAME-213ENST00000492657 TTC21BQ7Z4L5 1316 aa16.36■□□□□ 0.21
PRAME-213ENST00000492657 PTPRUQ92729 1446 aa16.36■□□□□ 0.21
PRAME-213ENST00000492657 CDK12Q9NYV4 1490 aaPredicted RBP16.36■□□□□ 0.21
PRAME-213ENST00000492657 VAMP4O75379 141 aa16.35■□□□□ 0.21
PRAME-213ENST00000492657 MBIPQ9NS73 344 aa16.35■□□□□ 0.21
PRAME-213ENST00000492657 DDX19BQ9UMR2 479 aa16.35■□□□□ 0.21
PRAME-213ENST00000492657 PLEKHG1Q9ULL1 1385 aa16.35■□□□□ 0.21
PRAME-213ENST00000492657 AKAP12Q02952 1782 aa16.35■□□□□ 0.21
PRAME-213ENST00000492657 C3P01024 1663 aa16.34■□□□□ 0.21
PRAME-213ENST00000492657 AMOTL2Q9Y2J4 779 aa16.34■□□□□ 0.21
PRAME-213ENST00000492657 ITSN1Q15811 1721 aa16.34■□□□□ 0.21
PRAME-213ENST00000492657 IPO8O15397 1037 aaKnown RBP16.33■□□□□ 0.21
PRAME-213ENST00000492657 EIF4A2Q14240 407 aaKnown RBP16.33■□□□□ 0.21
PRAME-213ENST00000492657 USP35Q9P2H5 1018 aa16.33■□□□□ 0.21
PRAME-213ENST00000492657 ALDH1L2Q3SY69 923 aa16.33■□□□□ 0.2
PRAME-213ENST00000492657 SULT6B1Q6IMI4 303 aa16.33■□□□□ 0.2
PRAME-213ENST00000492657 ZBTB40Q9NUA8 1239 aa16.33■□□□□ 0.2
PRAME-213ENST00000492657 EID1Q9Y6B2 187 aa16.33■□□□□ 0.2
PRAME-213ENST00000492657 KIF16BQ96L93 1317 aa16.33■□□□□ 0.2
PRAME-213ENST00000492657 PLEKHG3A1L390 1219 aa16.32■□□□□ 0.2
PRAME-213ENST00000492657 ZNF853P0CG23 659 aa16.32■□□□□ 0.2
PRAME-213ENST00000492657 C8orf58Q8NAV2 365 aa16.32■□□□□ 0.2
PRAME-213ENST00000492657 DLG5Q8TDM6 1919 aa16.32■□□□□ 0.2
PRAME-213ENST00000492657 GNAI1P63096 354 aa16.32■□□□□ 0.2
PRAME-213ENST00000492657 HSP90AB2PQ58FF8 381 aa16.32■□□□□ 0.2
PRAME-213ENST00000492657 MRPL50Q8N5N7 158 aaKnown RBP16.32■□□□□ 0.2
PRAME-213ENST00000492657 IFT57Q9NWB7 429 aa16.32■□□□□ 0.2
PRAME-213ENST00000492657 VIRMAQ69YN4 1812 aaKnown RBP16.3■□□□□ 0.2
PRAME-213ENST00000492657 HDAC1Q13547 482 aaPredicted RBP16.3■□□□□ 0.2
PRAME-213ENST00000492657 NFKBIBQ15653 356 aa16.3■□□□□ 0.2
PRAME-213ENST00000492657 CALD1Q05682 793 aaKnown RBP16.29■□□□□ 0.2
PRAME-213ENST00000492657 TWISTNBQ3B726 338 aaPredicted RBP16.29■□□□□ 0.2
PRAME-213ENST00000492657 CFAP44Q96MT7 982 aa16.29■□□□□ 0.2
PRAME-213ENST00000492657 C1orf115Q9H7X2 142 aa16.29■□□□□ 0.2
PRAME-213ENST00000492657 USP6P35125 1406 aa16.29■□□□□ 0.2
PRAME-213ENST00000492657 GSE1Q14687 1217 aa16.28■□□□□ 0.2
PRAME-213ENST00000492657 KRT24Q2M2I5 525 aa16.28■□□□□ 0.2
PRAME-213ENST00000492657 MCM10Q7L590 875 aa16.27■□□□□ 0.2
PRAME-213ENST00000492657 OVOS2A0A0J9YW53 1432 aa16.27■□□□□ 0.19
PRAME-213ENST00000492657 OVOS2Q6IE36 1432 aa16.27■□□□□ 0.19
PRAME-213ENST00000492657 SMC5Q8IY18 1101 aa16.27■□□□□ 0.19
PRAME-213ENST00000492657 TBX22Q9Y458 520 aa16.27■□□□□ 0.19
PRAME-213ENST00000492657 BRPF1P55201 1214 aaPredicted RBP16.26■□□□□ 0.19
PRAME-213ENST00000492657 LMOD3Q0VAK6 560 aa16.26■□□□□ 0.19
PRAME-213ENST00000492657 ZNF428Q96B54 188 aa16.26■□□□□ 0.19
PRAME-213ENST00000492657 ZBTB7BO15156 539 aaPredicted RBP16.25■□□□□ 0.19
PRAME-213ENST00000492657 NGDNQ8NEJ9 315 aaKnown RBP16.25■□□□□ 0.19
PRAME-213ENST00000492657 TOPAZ1Q8N9V7 1692 aa16.25■□□□□ 0.19
PRAME-213ENST00000492657 NRKQ7Z2Y5 1582 aa16.24■□□□□ 0.19
PRAME-213ENST00000492657 ARXQ96QS3 562 aa16.24■□□□□ 0.19
PRAME-213ENST00000492657 MAP3K19Q56UN5 1328 aa16.24■□□□□ 0.19
PRAME-213ENST00000492657 PEAK1Q9H792 1746 aa16.24■□□□□ 0.19
PRAME-213ENST00000492657 RGPD8O14715 1765 aaPredicted RBP16.24■□□□□ 0.19
PRAME-213ENST00000492657 LNPKQ9C0E8 428 aa16.24■□□□□ 0.19
PRAME-213ENST00000492657 NUTM2GQ5VZR2 741 aa16.23■□□□□ 0.19
PRAME-213ENST00000492657 THEMISQ8N1K5 641 aaPredicted RBP16.23■□□□□ 0.19
PRAME-213ENST00000492657 FOXO3O43524 673 aa16.23■□□□□ 0.19
PRAME-213ENST00000492657 FRAT2O75474 233 aaPredicted RBP16.23■□□□□ 0.19
PRAME-213ENST00000492657 SSH2Q76I76 1423 aa16.23■□□□□ 0.19
PRAME-213ENST00000492657 MIS18AQ9NYP9 233 aa16.23■□□□□ 0.19
PRAME-213ENST00000492657 ARHGAP23Q9P227 1491 aa16.22■□□□□ 0.19
PRAME-213ENST00000492657 KCNA6P17658 529 aa16.22■□□□□ 0.19
PRAME-213ENST00000492657 ARHGAP45Q92619 1136 aa16.22■□□□□ 0.19
PRAME-213ENST00000492657 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
PRAME-213ENST00000492657 TBC1D32Q96NH3 1257 aa16.22■□□□□ 0.19
PRAME-213ENST00000492657 SLIT1O75093 1534 aa16.21■□□□□ 0.19
PRAME-213ENST00000492657 USP31Q70CQ4 1352 aa16.21■□□□□ 0.19
PRAME-213ENST00000492657 NUCB1Q02818 461 aa16.21■□□□□ 0.19
PRAME-213ENST00000492657 SIRT2Q8IXJ6 389 aa16.21■□□□□ 0.19
PRAME-213ENST00000492657 RBM33Q96EV2 1170 aaKnown RBP16.21■□□□□ 0.19
PRAME-213ENST00000492657 PTCH1Q13635 1447 aa16.21■□□□□ 0.18
PRAME-213ENST00000492657 ABCC4O15439 1325 aa16.2■□□□□ 0.18
PRAME-213ENST00000492657 CHL1O00533 1208 aa16.19■□□□□ 0.18
PRAME-213ENST00000492657 MFAP1P55081 439 aaKnown RBP16.19■□□□□ 0.18
PRAME-213ENST00000492657 UPF2Q9HAU5 1272 aaKnown RBP16.19■□□□□ 0.18
PRAME-213ENST00000492657 FER1L4A9Z1Z3 1794 aa16.19■□□□□ 0.18
PRAME-213ENST00000492657 PIK3R4Q99570 1358 aa16.19■□□□□ 0.18
PRAME-213ENST00000492657 MTHFSDQ2M296 383 aaKnown RBP16.18■□□□□ 0.18
PRAME-213ENST00000492657 ANKRD45Q5TZF3 282 aa16.18■□□□□ 0.18
PRAME-213ENST00000492657 CHD1LQ86WJ1 897 aa16.18■□□□□ 0.18
PRAME-213ENST00000492657 DIP2AQ14689 1571 aa16.18■□□□□ 0.18
PRAME-213ENST00000492657 AMPHP49418 695 aa16.18■□□□□ 0.18
PRAME-213ENST00000492657 NLRP6P59044 892 aa16.18■□□□□ 0.18
PRAME-213ENST00000492657 TTC21AQ8NDW8 1320 aa16.18■□□□□ 0.18
PRAME-213ENST00000492657 EYA1Q99502 592 aa16.18■□□□□ 0.18
PRAME-213ENST00000492657 NALCNQ8IZF0 1738 aa16.17■□□□□ 0.18
PRAME-213ENST00000492657 API5Q9BZZ5 524 aaKnown RBP16.17■□□□□ 0.18
PRAME-213ENST00000492657 SLKQ9H2G2 1235 aaPredicted RBP16.16■□□□□ 0.18
PRAME-213ENST00000492657 RIMS1Q86UR5 1692 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms