RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 SPHKAPQ2M3C7 1700 aa5.7□□□□□ -1.5
TRA2B-215ENST00000492417 LMTK2Q8IWU2 1503 aa5.7□□□□□ -1.5
TRA2B-215ENST00000492417 ADAMTS13Q76LX8 1427 aa5.7□□□□□ -1.5
TRA2B-215ENST00000492417 MYL6BP14649 208 aa5.7□□□□□ -1.5
TRA2B-215ENST00000492417 LARP1Q6PKG0 1096 aaKnown RBP5.7□□□□□ -1.5
TRA2B-215ENST00000492417 TMOD3Q9NYL9 352 aa5.7□□□□□ -1.5
TRA2B-215ENST00000492417 PIK3R4Q99570 1358 aa5.7□□□□□ -1.5
TRA2B-215ENST00000492417 FCHSD2O94868 740 aa5.7□□□□□ -1.5
TRA2B-215ENST00000492417 ZCRB1Q8TBF4 217 aaKnown RBP5.7□□□□□ -1.5
TRA2B-215ENST00000492417 BRD4O60885 1362 aaPredicted RBP5.69□□□□□ -1.5
TRA2B-215ENST00000492417 ALKQ9UM73 1620 aa5.69□□□□□ -1.5
TRA2B-215ENST00000492417 BTBD11A6QL63 1104 aa5.69□□□□□ -1.5
TRA2B-215ENST00000492417 PER1O15534 1290 aaPredicted RBP5.69□□□□□ -1.5
TRA2B-215ENST00000492417 SLC39A6Q13433 755 aa5.69□□□□□ -1.5
TRA2B-215ENST00000492417 FKBP5Q13451 457 aaPredicted RBP5.69□□□□□ -1.5
TRA2B-215ENST00000492417 ANP32BQ92688 251 aaKnown RBP5.69□□□□□ -1.5
TRA2B-215ENST00000492417 KIAA0232Q92628 1395 aa5.69□□□□□ -1.5
TRA2B-215ENST00000492417 NINLQ9Y2I6 1382 aa5.69□□□□□ -1.5
TRA2B-215ENST00000492417 GNAT3A8MTJ3 354 aa5.69□□□□□ -1.5
TRA2B-215ENST00000492417 IL2RBP14784 551 aa5.69□□□□□ -1.5
TRA2B-215ENST00000492417 TMPOP42166 694 aaKnown RBP5.69□□□□□ -1.5
TRA2B-215ENST00000492417 GNAI1P63096 354 aa5.69□□□□□ -1.5
TRA2B-215ENST00000492417 BICDL1Q6ZP65 573 aa5.69□□□□□ -1.5
TRA2B-215ENST00000492417 IP6K1Q92551 441 aa5.69□□□□□ -1.5
TRA2B-215ENST00000492417 ADGRL3Q9HAR2 1447 aa5.69□□□□□ -1.5
TRA2B-215ENST00000492417 EXOSC9Q06265 439 aaKnown RBP5.69□□□□□ -1.5
TRA2B-215ENST00000492417 PTPRUQ92729 1446 aa5.69□□□□□ -1.5
TRA2B-215ENST00000492417 MYOM2P54296 1465 aa5.69□□□□□ -1.5
TRA2B-215ENST00000492417 SYNMO15061 1565 aa5.68□□□□□ -1.5
TRA2B-215ENST00000492417 ZBTB22O15209 634 aa5.68□□□□□ -1.5
TRA2B-215ENST00000492417 NBPF6Q5VWK0 638 aa5.68□□□□□ -1.5
TRA2B-215ENST00000492417 NBPF4Q96M43 638 aa5.68□□□□□ -1.5
TRA2B-215ENST00000492417 BCL11BQ9C0K0 894 aaPredicted RBP5.68□□□□□ -1.5
TRA2B-215ENST00000492417 E9PSI1 815 aa5.68□□□□□ -1.5
TRA2B-215ENST00000492417 IPO8O15397 1037 aaKnown RBP5.68□□□□□ -1.5
TRA2B-215ENST00000492417 IFNL2Q8IZJ0 200 aa5.68□□□□□ -1.5
TRA2B-215ENST00000492417 PUS7Q96PZ0 661 aaKnown RBP5.68□□□□□ -1.5
TRA2B-215ENST00000492417 PREX1Q8TCU6 1659 aa5.68□□□□□ -1.5
TRA2B-215ENST00000492417 NFE2L2Q16236 605 aa5.68□□□□□ -1.5
TRA2B-215ENST00000492417 ARHGEF10O15013 1369 aa5.68□□□□□ -1.5
TRA2B-215ENST00000492417 ZFYVE9O95405 1425 aa5.68□□□□□ -1.5
TRA2B-215ENST00000492417 PIP4K2AP48426 406 aaPredicted RBP5.67□□□□□ -1.5
TRA2B-215ENST00000492417 TAF7LQ5H9L4 462 aa5.67□□□□□ -1.5
TRA2B-215ENST00000492417 HDGFL1Q5TGJ6 251 aa5.67□□□□□ -1.5
TRA2B-215ENST00000492417 RIC3Q7Z5B4 369 aa5.67□□□□□ -1.5
TRA2B-215ENST00000492417 FLT4P35916 1363 aa5.67□□□□□ -1.5
TRA2B-215ENST00000492417 PHF14O94880 888 aa5.67□□□□□ -1.5
TRA2B-215ENST00000492417 HSP90AB1P08238 724 aaKnown RBP5.67□□□□□ -1.5
TRA2B-215ENST00000492417 AMOTQ4VCS5 1084 aa5.67□□□□□ -1.5
TRA2B-215ENST00000492417 B4GALNT3Q6L9W6 998 aa5.67□□□□□ -1.5
TRA2B-215ENST00000492417 PHACTR3Q96KR7 559 aa5.67□□□□□ -1.5
TRA2B-215ENST00000492417 WWC3Q9ULE0 1092 aa5.67□□□□□ -1.5
TRA2B-215ENST00000492417 SPATA31A3Q5VYP0 1347 aa5.67□□□□□ -1.5
TRA2B-215ENST00000492417 RGS3P49796 1198 aa5.67□□□□□ -1.5
TRA2B-215ENST00000492417 SPATA31D1Q6ZQQ2 1576 aa5.67□□□□□ -1.5
TRA2B-215ENST00000492417 FAM135BQ49AJ0 1406 aa5.67□□□□□ -1.5
TRA2B-215ENST00000492417 EDC4Q6P2E9 1401 aaKnown RBP5.67□□□□□ -1.5
TRA2B-215ENST00000492417 ANXA1P04083 346 aa5.67□□□□□ -1.5
TRA2B-215ENST00000492417 MTHFSDQ2M296 383 aaKnown RBP5.67□□□□□ -1.5
TRA2B-215ENST00000492417 BCORL1Q5H9F3 1711 aa5.66□□□□□ -1.5
TRA2B-215ENST00000492417 TWISTNBQ3B726 338 aaPredicted RBP5.66□□□□□ -1.5
TRA2B-215ENST00000492417 NFATC2IPQ8NCF5 419 aa5.66□□□□□ -1.5
TRA2B-215ENST00000492417 AFF2P51816 1311 aa5.66□□□□□ -1.5
TRA2B-215ENST00000492417 NEXNQ0ZGT2 675 aa5.66□□□□□ -1.5
TRA2B-215ENST00000492417 C9orf78Q9NZ63 289 aaPredicted RBP5.66□□□□□ -1.5
TRA2B-215ENST00000492417 SLC4A2P04920 1241 aa5.66□□□□□ -1.5
TRA2B-215ENST00000492417 CHMP4AQ9BY43 222 aa5.66□□□□□ -1.5
TRA2B-215ENST00000492417 COG6Q9Y2V7 657 aa5.66□□□□□ -1.5
TRA2B-215ENST00000492417 MROH1Q8NDA8 1641 aa5.66□□□□□ -1.5
TRA2B-215ENST00000492417 NSD2O96028 1365 aa5.65□□□□□ -1.5
TRA2B-215ENST00000492417 NEXMIFQ5QGS0 1516 aa5.65□□□□□ -1.5
TRA2B-215ENST00000492417 PRIM1P49642 420 aaKnown RBP5.65□□□□□ -1.5
TRA2B-215ENST00000492417 ARHGEF25Q86VW2 580 aa5.65□□□□□ -1.5
TRA2B-215ENST00000492417 WWC1Q8IX03 1113 aa5.65□□□□□ -1.5
TRA2B-215ENST00000492417 TRPC5Q9UL62 973 aaPredicted RBP5.65□□□□□ -1.5
TRA2B-215ENST00000492417 AXIN2Q9Y2T1 843 aa5.65□□□□□ -1.5
TRA2B-215ENST00000492417 C1orf167Q5SNV9 1468 aa5.65□□□□□ -1.5
TRA2B-215ENST00000492417 RXRBP28702 533 aa5.65□□□□□ -1.5
TRA2B-215ENST00000492417 TAF7Q15545 349 aaPredicted RBP5.65□□□□□ -1.5
TRA2B-215ENST00000492417 TMX4Q9H1E5 349 aaPredicted RBP5.65□□□□□ -1.5
TRA2B-215ENST00000492417 ASXL1Q8IXJ9 1541 aa5.65□□□□□ -1.51
TRA2B-215ENST00000492417 USP6P35125 1406 aa5.65□□□□□ -1.51
TRA2B-215ENST00000492417 MS4A1P11836 297 aa5.65□□□□□ -1.51
TRA2B-215ENST00000492417 CCDC85AQ96PX6 553 aaPredicted RBP5.65□□□□□ -1.51
TRA2B-215ENST00000492417 KCNQ4P56696 695 aa5.64□□□□□ -1.51
TRA2B-215ENST00000492417 HOMEZQ8IX15 550 aa5.64□□□□□ -1.51
TRA2B-215ENST00000492417 C3P01024 1663 aa5.64□□□□□ -1.51
TRA2B-215ENST00000492417 DDX58O95786 925 aaKnown RBP5.64□□□□□ -1.51
TRA2B-215ENST00000492417 ERICH6BQ5W0A0 696 aa5.64□□□□□ -1.51
TRA2B-215ENST00000492417 LGR6Q9HBX8 967 aa5.64□□□□□ -1.51
TRA2B-215ENST00000492417 ZC3H13Q5T200 1668 aaKnown RBP5.64□□□□□ -1.51
TRA2B-215ENST00000492417 G3V3G9 751 aa5.64□□□□□ -1.51
TRA2B-215ENST00000492417 ATP6V1AP38606 617 aa5.64□□□□□ -1.51
TRA2B-215ENST00000492417 KRT24Q2M2I5 525 aa5.64□□□□□ -1.51
TRA2B-215ENST00000492417 DCAF8Q5TAQ9 597 aa5.64□□□□□ -1.51
TRA2B-215ENST00000492417 DUSP27Q5VZP5 1158 aa5.64□□□□□ -1.51
TRA2B-215ENST00000492417 ZBED9Q6R2W3 1325 aa5.64□□□□□ -1.51
TRA2B-215ENST00000492417 SBNO2Q9Y2G9 1366 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 BCAR3O75815 825 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 IL13P35225 146 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms