RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 SPHKAPQ2M3C7 1700 aa12.57□□□□□ -0.4
BRD9-209ENST00000490814 SIGLEC1Q9BZZ2 1709 aa12.57□□□□□ -0.4
BRD9-209ENST00000490814 MSNP26038 577 aaKnown RBP12.57□□□□□ -0.4
BRD9-209ENST00000490814 PROSER2Q86WR7 435 aaPredicted RBP12.57□□□□□ -0.4
BRD9-209ENST00000490814 CCDC27Q2M243 656 aa12.56□□□□□ -0.4
BRD9-209ENST00000490814 LMOD2Q6P5Q4 547 aa12.56□□□□□ -0.4
BRD9-209ENST00000490814 TERF2IPQ9NYB0 399 aa12.56□□□□□ -0.4
BRD9-209ENST00000490814 MYOM1P52179 1685 aa12.56□□□□□ -0.4
BRD9-209ENST00000490814 TNPO1Q92973 898 aaKnown RBP12.56□□□□□ -0.4
BRD9-209ENST00000490814 PIP4K2BP78356 416 aa12.56□□□□□ -0.4
BRD9-209ENST00000490814 KIF20AO95235 890 aa12.55□□□□□ -0.4
BRD9-209ENST00000490814 PRKAR2BP31323 418 aa12.55□□□□□ -0.4
BRD9-209ENST00000490814 PRAM1Q96QH2 718 aa12.55□□□□□ -0.4
BRD9-209ENST00000490814 TRIM35Q9UPQ4 493 aa12.55□□□□□ -0.4
BRD9-209ENST00000490814 ZBTB7CA1YPR0 619 aa12.54□□□□□ -0.4
BRD9-209ENST00000490814 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.54□□□□□ -0.4
BRD9-209ENST00000490814 PHF23Q9BUL5 403 aaPredicted RBP12.54□□□□□ -0.4
BRD9-209ENST00000490814 CEP152O94986 1710 aa12.54□□□□□ -0.4
BRD9-209ENST00000490814 HDGFL2Q7Z4V5 671 aaPredicted RBP12.54□□□□□ -0.4
BRD9-209ENST00000490814 AMOTL2Q9Y2J4 779 aa12.54□□□□□ -0.4
BRD9-209ENST00000490814 ZSCAN20P17040 1043 aaPredicted RBP12.54□□□□□ -0.4
BRD9-209ENST00000490814 TERF1P54274 439 aa12.54□□□□□ -0.4
BRD9-209ENST00000490814 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.54□□□□□ -0.4
BRD9-209ENST00000490814 KIF16BQ96L93 1317 aa12.54□□□□□ -0.4
BRD9-209ENST00000490814 SOX12O15370 315 aa12.53□□□□□ -0.4
BRD9-209ENST00000490814 DNTTIP2Q5QJE6 756 aaKnown RBP12.53□□□□□ -0.4
BRD9-209ENST00000490814 CHD1LQ86WJ1 897 aa12.53□□□□□ -0.4
BRD9-209ENST00000490814 NLRP1Q9C000 1473 aa12.53□□□□□ -0.4
BRD9-209ENST00000490814 GOLGA6L22H0YM25 854 aa12.53□□□□□ -0.4
BRD9-209ENST00000490814 ZNF335Q9H4Z2 1342 aaPredicted RBP12.53□□□□□ -0.4
BRD9-209ENST00000490814 CHRM1P11229 460 aaPredicted RBP12.53□□□□□ -0.4
BRD9-209ENST00000490814 NASPP49321 788 aaPredicted RBP12.53□□□□□ -0.4
BRD9-209ENST00000490814 HDAC1Q13547 482 aaPredicted RBP12.53□□□□□ -0.4
BRD9-209ENST00000490814 CABP1Q9NZU7 370 aa12.53□□□□□ -0.4
BRD9-209ENST00000490814 DDX49Q9Y6V7 483 aaKnown RBP12.53□□□□□ -0.4
BRD9-209ENST00000490814 FYB1O15117 783 aa12.52□□□□□ -0.4
BRD9-209ENST00000490814 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.4
BRD9-209ENST00000490814 R3HCC1Q9Y3T6 440 aaKnown RBP12.52□□□□□ -0.4
BRD9-209ENST00000490814 OFD1O75665 1012 aa12.52□□□□□ -0.41
BRD9-209ENST00000490814 ANKRD36BQ8N2N9 1353 aa12.52□□□□□ -0.41
BRD9-209ENST00000490814 KCNA6P17658 529 aa12.52□□□□□ -0.41
BRD9-209ENST00000490814 ZBTB40Q9NUA8 1239 aa12.52□□□□□ -0.41
BRD9-209ENST00000490814 TET3O43151 1660 aa12.51□□□□□ -0.41
BRD9-209ENST00000490814 RIMS2Q9UQ26 1411 aa12.51□□□□□ -0.41
BRD9-209ENST00000490814 A0A1W2PP64 1363 aa12.51□□□□□ -0.41
BRD9-209ENST00000490814 SBNO2Q9Y2G9 1366 aa12.51□□□□□ -0.41
BRD9-209ENST00000490814 MYOM2P54296 1465 aa12.51□□□□□ -0.41
BRD9-209ENST00000490814 LETM1O95202 739 aaPredicted RBP12.51□□□□□ -0.41
BRD9-209ENST00000490814 CT47B1P0C2W7 299 aaPredicted RBP12.51□□□□□ -0.41
BRD9-209ENST00000490814 SKOR2Q2VWA4 1001 aaPredicted RBP12.51□□□□□ -0.41
BRD9-209ENST00000490814 SMC5Q8IY18 1101 aa12.51□□□□□ -0.41
BRD9-209ENST00000490814 GTPBP4Q9BZE4 634 aaKnown RBP12.51□□□□□ -0.41
BRD9-209ENST00000490814 ISY1Q9ULR0 285 aaKnown RBP12.51□□□□□ -0.41
BRD9-209ENST00000490814 AGLP35573 1532 aa12.51□□□□□ -0.41
BRD9-209ENST00000490814 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
BRD9-209ENST00000490814 IRX3P78415 501 aaPredicted RBP12.5□□□□□ -0.41
BRD9-209ENST00000490814 SAMD1Q6SPF0 538 aaPredicted RBP12.49□□□□□ -0.41
BRD9-209ENST00000490814 TMEM2Q9UHN6 1383 aa12.49□□□□□ -0.41
BRD9-209ENST00000490814 XPCQ01831 940 aaPredicted RBP12.49□□□□□ -0.41
BRD9-209ENST00000490814 NUCB1Q02818 461 aa12.49□□□□□ -0.41
BRD9-209ENST00000490814 TAF3Q5VWG9 929 aa12.49□□□□□ -0.41
BRD9-209ENST00000490814 TSPYL6Q8N831 410 aa12.49□□□□□ -0.41
BRD9-209ENST00000490814 PLEKHF1Q96S99 279 aa12.49□□□□□ -0.41
BRD9-209ENST00000490814 CCDC173Q0VFZ6 552 aa12.49□□□□□ -0.41
BRD9-209ENST00000490814 ZSCAN30Q86W11 494 aa12.49□□□□□ -0.41
BRD9-209ENST00000490814 CCDC94Q9BW85 323 aaPredicted RBP12.49□□□□□ -0.41
BRD9-209ENST00000490814 CDK19Q9BWU1 502 aa12.48□□□□□ -0.41
BRD9-209ENST00000490814 UQCRHLA0A096LP55 91 aa12.48□□□□□ -0.41
BRD9-209ENST00000490814 UQCRHP07919 91 aa12.48□□□□□ -0.41
BRD9-209ENST00000490814 SSFA2P28290 1259 aa12.48□□□□□ -0.41
BRD9-209ENST00000490814 DCTN1Q14203 1278 aa12.47□□□□□ -0.41
BRD9-209ENST00000490814 PHACTR3Q96KR7 559 aa12.47□□□□□ -0.41
BRD9-209ENST00000490814 RPGRIP1LQ68CZ1 1315 aa12.47□□□□□ -0.41
BRD9-209ENST00000490814 IQSEC2Q5JU85 1478 aa12.47□□□□□ -0.41
BRD9-209ENST00000490814 TBC1D9Q6ZT07 1266 aa12.47□□□□□ -0.41
BRD9-209ENST00000490814 FER1L4A9Z1Z3 1794 aa12.47□□□□□ -0.41
BRD9-209ENST00000490814 CD2BP2O95400 341 aaKnown RBP12.46□□□□□ -0.41
BRD9-209ENST00000490814 FOXD4L5Q5VV16 416 aaPredicted RBP12.46□□□□□ -0.41
BRD9-209ENST00000490814 FOXD4L4Q8WXT5 416 aaPredicted RBP12.46□□□□□ -0.41
BRD9-209ENST00000490814 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.41
BRD9-209ENST00000490814 KIF1BO60333 1816 aa12.46□□□□□ -0.41
BRD9-209ENST00000490814 EFCAB6Q5THR3 1501 aa12.46□□□□□ -0.41
BRD9-209ENST00000490814 EMILIN1Q9Y6C2 1016 aa12.46□□□□□ -0.41
BRD9-209ENST00000490814 MAPK8IP2Q13387 824 aaPredicted RBP12.46□□□□□ -0.42
BRD9-209ENST00000490814 RGS22Q8NE09 1264 aa12.46□□□□□ -0.42
BRD9-209ENST00000490814 MROH1Q8NDA8 1641 aa12.45□□□□□ -0.42
BRD9-209ENST00000490814 MCTP1Q6DN14 999 aa12.45□□□□□ -0.42
BRD9-209ENST00000490814 NSD2O96028 1365 aa12.45□□□□□ -0.42
BRD9-209ENST00000490814 FAM83GA6ND36 823 aa12.45□□□□□ -0.42
BRD9-209ENST00000490814 ZBTB22O15209 634 aa12.45□□□□□ -0.42
BRD9-209ENST00000490814 TWISTNBQ3B726 338 aaPredicted RBP12.45□□□□□ -0.42
BRD9-209ENST00000490814 TPRNQ4KMQ1 711 aa12.45□□□□□ -0.42
BRD9-209ENST00000490814 CAVIN1Q6NZI2 390 aaKnown RBP12.45□□□□□ -0.42
BRD9-209ENST00000490814 ATAD2Q6PL18 1390 aa12.45□□□□□ -0.42
BRD9-209ENST00000490814 ABCC11Q96J66 1382 aa12.44□□□□□ -0.42
BRD9-209ENST00000490814 FCHSD2O94868 740 aa12.44□□□□□ -0.42
BRD9-209ENST00000490814 PTMSP20962 102 aa12.44□□□□□ -0.42
BRD9-209ENST00000490814 RAB3GAP1Q15042 981 aa12.44□□□□□ -0.42
BRD9-209ENST00000490814 K7ELQ4 463 aaPredicted RBP12.44□□□□□ -0.42
BRD9-209ENST00000490814 DYNC1I1O14576 645 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms