RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 PPP1R37O75864 691 aa13.54□□□□□ -0.24
SRRM1-217ENST00000490543 TECPR2O15040 1411 aa13.54□□□□□ -0.24
SRRM1-217ENST00000490543 VPS72Q15906 364 aa13.53□□□□□ -0.24
SRRM1-217ENST00000490543 ABCC11Q96J66 1382 aa13.53□□□□□ -0.24
SRRM1-217ENST00000490543 ONECUT3O60422 494 aaPredicted RBP13.52□□□□□ -0.25
SRRM1-217ENST00000490543 HOXB3P14651 431 aaPredicted RBP13.52□□□□□ -0.25
SRRM1-217ENST00000490543 SF3B2Q13435 895 aaKnown RBP13.52□□□□□ -0.25
SRRM1-217ENST00000490543 NKX1-1Q15270 411 aaPredicted RBP13.52□□□□□ -0.25
SRRM1-217ENST00000490543 RRBP1Q9P2E9 1410 aaKnown RBP13.52□□□□□ -0.25
SRRM1-217ENST00000490543 USP32Q8NFA0 1604 aa13.51□□□□□ -0.25
SRRM1-217ENST00000490543 PSDA5PKW4 1024 aaPredicted RBP13.51□□□□□ -0.25
SRRM1-217ENST00000490543 HAP1P54257 671 aaPredicted RBP13.51□□□□□ -0.25
SRRM1-217ENST00000490543 KRT27Q7Z3Y8 459 aa13.51□□□□□ -0.25
SRRM1-217ENST00000490543 CCDC9Q9Y3X0 531 aaKnown RBP13.51□□□□□ -0.25
SRRM1-217ENST00000490543 CCDC144AA2RUR9 1427 aa13.5□□□□□ -0.25
SRRM1-217ENST00000490543 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
SRRM1-217ENST00000490543 SPATA31E1Q6ZUB1 1445 aa13.49□□□□□ -0.25
SRRM1-217ENST00000490543 FAM83GA6ND36 823 aa13.49□□□□□ -0.25
SRRM1-217ENST00000490543 LMOD2Q6P5Q4 547 aa13.49□□□□□ -0.25
SRRM1-217ENST00000490543 TNS3Q68CZ2 1445 aa13.48□□□□□ -0.25
SRRM1-217ENST00000490543 MARVELD3Q96A59 401 aa13.48□□□□□ -0.25
SRRM1-217ENST00000490543 RGPD8O14715 1765 aaPredicted RBP13.48□□□□□ -0.25
SRRM1-217ENST00000490543 YTHDC2Q9H6S0 1430 aaKnown RBP13.47□□□□□ -0.25
SRRM1-217ENST00000490543 ANKRD30BQ9BXX2 1392 aa13.47□□□□□ -0.25
SRRM1-217ENST00000490543 HRCP23327 699 aa13.47□□□□□ -0.25
SRRM1-217ENST00000490543 PSME1Q06323 249 aa13.47□□□□□ -0.25
SRRM1-217ENST00000490543 KIF1AQ12756 1690 aa13.47□□□□□ -0.25
SRRM1-217ENST00000490543 A0A0G2JS52 829 aa13.46□□□□□ -0.25
SRRM1-217ENST00000490543 MYT1Q01538 1121 aa13.46□□□□□ -0.25
SRRM1-217ENST00000490543 SAFB2Q14151 953 aaKnown RBP eCLIP13.46□□□□□ -0.25
SRRM1-217ENST00000490543 FAM98CQ17RN3 349 aaKnown RBP13.46□□□□□ -0.25
SRRM1-217ENST00000490543 FAM182BQ5T319 152 aa13.46□□□□□ -0.25
SRRM1-217ENST00000490543 SIRT1Q96EB6 747 aa13.46□□□□□ -0.25
SRRM1-217ENST00000490543 PIK3C2GO75747 1445 aa13.46□□□□□ -0.26
SRRM1-217ENST00000490543 LRP5O75197 1615 aa13.46□□□□□ -0.26
SRRM1-217ENST00000490543 PLCH1Q4KWH8 1693 aa13.45□□□□□ -0.26
SRRM1-217ENST00000490543 BAG6P46379 1132 aa13.45□□□□□ -0.26
SRRM1-217ENST00000490543 EN1Q05925 392 aaPredicted RBP13.45□□□□□ -0.26
SRRM1-217ENST00000490543 DOK7Q18PE1 504 aa13.45□□□□□ -0.26
SRRM1-217ENST00000490543 PMFBP1Q8TBY8 1022 aa13.45□□□□□ -0.26
SRRM1-217ENST00000490543 C14orf93Q9H972 538 aaKnown RBP13.45□□□□□ -0.26
SRRM1-217ENST00000490543 SBNO1A3KN83 1393 aa13.45□□□□□ -0.26
SRRM1-217ENST00000490543 KNDC1Q76NI1 1749 aa13.44□□□□□ -0.26
SRRM1-217ENST00000490543 CFAP70Q5T0N1 1121 aa13.44□□□□□ -0.26
SRRM1-217ENST00000490543 PCDH10Q9P2E7 1040 aa13.44□□□□□ -0.26
SRRM1-217ENST00000490543 IFT172Q9UG01 1749 aa13.44□□□□□ -0.26
SRRM1-217ENST00000490543 NWD2Q9ULI1 1742 aa13.44□□□□□ -0.26
SRRM1-217ENST00000490543 NRXN1Q9ULB1 1477 aa13.43□□□□□ -0.26
SRRM1-217ENST00000490543 PRAM1Q96QH2 718 aa13.43□□□□□ -0.26
SRRM1-217ENST00000490543 MPHOSPH9Q99550 1183 aa13.43□□□□□ -0.26
SRRM1-217ENST00000490543 BTG4Q9NY30 223 aa13.43□□□□□ -0.26
SRRM1-217ENST00000490543 KIF3CO14782 793 aa13.42□□□□□ -0.26
SRRM1-217ENST00000490543 AMER1Q5JTC6 1135 aaPredicted RBP13.42□□□□□ -0.26
SRRM1-217ENST00000490543 ZNF710Q8N1W2 664 aa13.42□□□□□ -0.26
SRRM1-217ENST00000490543 ARHGEF10O15013 1369 aa13.42□□□□□ -0.26
SRRM1-217ENST00000490543 ABCA3Q99758 1704 aa13.42□□□□□ -0.26
SRRM1-217ENST00000490543 C2orf72A6NCS6 295 aa13.41□□□□□ -0.26
SRRM1-217ENST00000490543 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
SRRM1-217ENST00000490543 EMP3P54852 163 aa13.4□□□□□ -0.26
SRRM1-217ENST00000490543 RTN4Q9NQC3 1192 aaKnown RBP13.4□□□□□ -0.26
SRRM1-217ENST00000490543 DHX57Q6P158 1386 aaKnown RBP13.4□□□□□ -0.26
SRRM1-217ENST00000490543 CDAN1Q8IWY9 1227 aa13.39□□□□□ -0.27
SRRM1-217ENST00000490543 NRAPQ86VF7 1730 aa13.39□□□□□ -0.27
SRRM1-217ENST00000490543 SPATA31A5Q5VU36 1347 aa13.39□□□□□ -0.27
SRRM1-217ENST00000490543 SPATA31A7Q8IWB4 1347 aa13.39□□□□□ -0.27
SRRM1-217ENST00000490543 EZH2Q15910 746 aaKnown RBP13.38□□□□□ -0.27
SRRM1-217ENST00000490543 HIRIP3Q9BW71 556 aaPredicted RBP13.38□□□□□ -0.27
SRRM1-217ENST00000490543 RYDENQ9NUL5 291 aaKnown RBP13.38□□□□□ -0.27
SRRM1-217ENST00000490543 POGKQ9P215 609 aa13.38□□□□□ -0.27
SRRM1-217ENST00000490543 PRR36Q9H6K5 1346 aa13.38□□□□□ -0.27
SRRM1-217ENST00000490543 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
SRRM1-217ENST00000490543 HOXB1P14653 301 aaPredicted RBP13.37□□□□□ -0.27
SRRM1-217ENST00000490543 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
SRRM1-217ENST00000490543 ACIN1Q9UKV3 1341 aaKnown RBP13.36□□□□□ -0.27
SRRM1-217ENST00000490543 TRPM3Q9HCF6 1732 aaPredicted RBP13.36□□□□□ -0.27
SRRM1-217ENST00000490543 CAMKK2Q96RR4 588 aa13.35□□□□□ -0.27
SRRM1-217ENST00000490543 ANKARQ7Z5J8 1434 aa13.35□□□□□ -0.27
SRRM1-217ENST00000490543 MINK1Q8N4C8 1332 aaPredicted RBP13.35□□□□□ -0.27
SRRM1-217ENST00000490543 GPRASP1Q5JY77 1395 aa13.34□□□□□ -0.27
SRRM1-217ENST00000490543 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
SRRM1-217ENST00000490543 TRIM37O94972 964 aa13.34□□□□□ -0.27
SRRM1-217ENST00000490543 PRDM11Q9NQV5 511 aa13.34□□□□□ -0.27
SRRM1-217ENST00000490543 TRAK1Q9UPV9 953 aa13.34□□□□□ -0.27
SRRM1-217ENST00000490543 COL14A1Q05707 1796 aaKnown RBP13.34□□□□□ -0.27
SRRM1-217ENST00000490543 ALS2Q96Q42 1657 aa13.34□□□□□ -0.27
SRRM1-217ENST00000490543 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.27
SRRM1-217ENST00000490543 DISP2A7MBM2 1401 aa13.33□□□□□ -0.28
SRRM1-217ENST00000490543 CHRNA2Q15822 529 aa13.33□□□□□ -0.28
SRRM1-217ENST00000490543 ZSWIM6Q9HCJ5 1215 aa13.33□□□□□ -0.28
SRRM1-217ENST00000490543 THSD7AQ9UPZ6 1657 aa13.32□□□□□ -0.28
SRRM1-217ENST00000490543 FAM205CA6NFA0 338 aa13.32□□□□□ -0.28
SRRM1-217ENST00000490543 NGDNQ8NEJ9 315 aaKnown RBP13.32□□□□□ -0.28
SRRM1-217ENST00000490543 TNS1Q9HBL0 1735 aaKnown RBP13.32□□□□□ -0.28
SRRM1-217ENST00000490543 DLC1Q96QB1 1528 aa13.32□□□□□ -0.28
SRRM1-217ENST00000490543 SPATA31A1Q5TZJ5 1347 aa13.32□□□□□ -0.28
SRRM1-217ENST00000490543 POTEB3A0JP26 581 aa13.31□□□□□ -0.28
SRRM1-217ENST00000490543 WASLO00401 505 aaPredicted RBP13.31□□□□□ -0.28
SRRM1-217ENST00000490543 APBA3O96018 575 aa13.31□□□□□ -0.28
SRRM1-217ENST00000490543 GPR153Q6NV75 609 aa13.31□□□□□ -0.28
SRRM1-217ENST00000490543 POTEBQ6S5H4 581 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms