RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 PHACTR3Q96KR7 559 aa20.67■□□□□ 0.9
SNX5-214ENST00000490175 BACH2Q9BYV9 841 aa20.66■□□□□ 0.9
SNX5-214ENST00000490175 ZNF428Q96B54 188 aa20.66■□□□□ 0.9
SNX5-214ENST00000490175 BCL2L13Q9BXK5 485 aa20.65■□□□□ 0.9
SNX5-214ENST00000490175 NGDNQ8NEJ9 315 aaKnown RBP20.65■□□□□ 0.9
SNX5-214ENST00000490175 SMC4Q9NTJ3 1288 aa20.64■□□□□ 0.89
SNX5-214ENST00000490175 DLG5Q8TDM6 1919 aa20.64■□□□□ 0.89
SNX5-214ENST00000490175 PEAK1Q9H792 1746 aa20.63■□□□□ 0.89
SNX5-214ENST00000490175 ANP32AP39687 249 aaKnown RBP20.63■□□□□ 0.89
SNX5-214ENST00000490175 PMFBP1Q8TBY8 1022 aa20.63■□□□□ 0.89
SNX5-214ENST00000490175 RLBP1P12271 317 aa20.63■□□□□ 0.89
SNX5-214ENST00000490175 EIF4A2Q14240 407 aaKnown RBP20.63■□□□□ 0.89
SNX5-214ENST00000490175 ALDH1L2Q3SY69 923 aa20.63■□□□□ 0.89
SNX5-214ENST00000490175 IFT57Q9NWB7 429 aa20.63■□□□□ 0.89
SNX5-214ENST00000490175 RGPD1P0DJD0 1748 aa20.63■□□□□ 0.89
SNX5-214ENST00000490175 GNAI1P63096 354 aa20.62■□□□□ 0.89
SNX5-214ENST00000490175 SSH1Q8WYL5 1049 aa20.62■□□□□ 0.89
SNX5-214ENST00000490175 USP54Q70EL1 1684 aa20.62■□□□□ 0.89
SNX5-214ENST00000490175 DZIP1LQ8IYY4 767 aaKnown RBP20.61■□□□□ 0.89
SNX5-214ENST00000490175 PIK3C2AO00443 1686 aa20.61■□□□□ 0.89
SNX5-214ENST00000490175 MVPQ14764 893 aaKnown RBP20.61■□□□□ 0.89
SNX5-214ENST00000490175 KIF16BQ96L93 1317 aa20.61■□□□□ 0.89
SNX5-214ENST00000490175 FTSJ3Q8IY81 847 aaKnown RBP20.6■□□□□ 0.89
SNX5-214ENST00000490175 BRPF1P55201 1214 aaPredicted RBP20.6■□□□□ 0.89
SNX5-214ENST00000490175 IGHDP01880 384 aa20.59■□□□□ 0.89
SNX5-214ENST00000490175 ZNF853P0CG23 659 aa20.59■□□□□ 0.89
SNX5-214ENST00000490175 SBNO1A3KN83 1393 aa20.59■□□□□ 0.89
SNX5-214ENST00000490175 IPO8O15397 1037 aaKnown RBP20.58■□□□□ 0.89
SNX5-214ENST00000490175 TNNQ9UQP3 1299 aa20.58■□□□□ 0.89
SNX5-214ENST00000490175 ATF7IPQ6VMQ6 1270 aa20.58■□□□□ 0.88
SNX5-214ENST00000490175 FLT4P35916 1363 aa20.57■□□□□ 0.88
SNX5-214ENST00000490175 ARHGEF10O15013 1369 aa20.57■□□□□ 0.88
SNX5-214ENST00000490175 TRIM27P14373 513 aa20.56■□□□□ 0.88
SNX5-214ENST00000490175 SULT6B1Q6IMI4 303 aa20.56■□□□□ 0.88
SNX5-214ENST00000490175 SKAP1Q86WV1 359 aa20.56■□□□□ 0.88
SNX5-214ENST00000490175 CFAP44Q96MT7 982 aa20.56■□□□□ 0.88
SNX5-214ENST00000490175 KIF24Q5T7B8 1368 aa20.56■□□□□ 0.88
SNX5-214ENST00000490175 HSP90AB2PQ58FF8 381 aa20.56■□□□□ 0.88
SNX5-214ENST00000490175 MAP3K19Q56UN5 1328 aa20.56■□□□□ 0.88
SNX5-214ENST00000490175 LAS1LQ9Y4W2 734 aaKnown RBP20.55■□□□□ 0.88
SNX5-214ENST00000490175 IPO9Q96P70 1041 aaKnown RBP20.54■□□□□ 0.88
SNX5-214ENST00000490175 BCL11AQ9H165 835 aa20.54■□□□□ 0.88
SNX5-214ENST00000490175 NOB1Q9ULX3 412 aaKnown RBP20.54■□□□□ 0.88
SNX5-214ENST00000490175 DDX19BQ9UMR2 479 aa20.54■□□□□ 0.88
SNX5-214ENST00000490175 THUMPD2Q9BTF0 503 aaKnown RBP20.54■□□□□ 0.88
SNX5-214ENST00000490175 NOP58Q9Y2X3 529 aaKnown RBP20.54■□□□□ 0.88
SNX5-214ENST00000490175 NPHP4O75161 1426 aaPredicted RBP20.53■□□□□ 0.88
SNX5-214ENST00000490175 MARF1Q9Y4F3 1742 aaKnown RBP20.53■□□□□ 0.88
SNX5-214ENST00000490175 AEBP1Q8IUX7 1158 aa20.53■□□□□ 0.88
SNX5-214ENST00000490175 RWDD1Q9H446 243 aaPredicted RBP20.53■□□□□ 0.88
SNX5-214ENST00000490175 PCDHB15Q9Y5E8 787 aa20.53■□□□□ 0.88
SNX5-214ENST00000490175 ADGRL3Q9HAR2 1447 aa20.53■□□□□ 0.88
SNX5-214ENST00000490175 FAM161AQ3B820 660 aa20.53■□□□□ 0.88
SNX5-214ENST00000490175 MBIPQ9NS73 344 aa20.53■□□□□ 0.88
SNX5-214ENST00000490175 VAMP4O75379 141 aa20.52■□□□□ 0.88
SNX5-214ENST00000490175 NLRP6P59044 892 aa20.51■□□□□ 0.87
SNX5-214ENST00000490175 ARHGAP45Q92619 1136 aa20.51■□□□□ 0.87
SNX5-214ENST00000490175 KDRP35968 1356 aa20.5■□□□□ 0.87
SNX5-214ENST00000490175 PHF8Q9UPP1 1060 aa20.5■□□□□ 0.87
SNX5-214ENST00000490175 AMPHP49418 695 aa20.49■□□□□ 0.87
SNX5-214ENST00000490175 RGS3P49796 1198 aa20.49■□□□□ 0.87
SNX5-214ENST00000490175 SOX12O15370 315 aa20.49■□□□□ 0.87
SNX5-214ENST00000490175 ITPRIPQ8IWB1 547 aa20.48■□□□□ 0.87
SNX5-214ENST00000490175 NWD1Q149M9 1564 aa20.48■□□□□ 0.87
SNX5-214ENST00000490175 IGSF1Q8N6C5 1336 aa20.48■□□□□ 0.87
SNX5-214ENST00000490175 FAM83GA6ND36 823 aa20.48■□□□□ 0.87
SNX5-214ENST00000490175 HAP1P54257 671 aaPredicted RBP20.47■□□□□ 0.87
SNX5-214ENST00000490175 TWISTNBQ3B726 338 aaPredicted RBP20.47■□□□□ 0.87
SNX5-214ENST00000490175 MRPL50Q8N5N7 158 aaKnown RBP20.47■□□□□ 0.87
SNX5-214ENST00000490175 C8orf34Q49A92 452 aa20.46■□□□□ 0.87
SNX5-214ENST00000490175 TMEM57Q8N5G2 664 aa20.46■□□□□ 0.87
SNX5-214ENST00000490175 ABTB2Q8N961 1025 aa20.46■□□□□ 0.87
SNX5-214ENST00000490175 TSPYL6Q8N831 410 aa20.46■□□□□ 0.87
SNX5-214ENST00000490175 CHMP4BQ9H444 224 aaKnown RBP20.46■□□□□ 0.87
SNX5-214ENST00000490175 VIRMAQ69YN4 1812 aaKnown RBP20.45■□□□□ 0.86
SNX5-214ENST00000490175 RTL1A6NKG5 1358 aa20.45■□□□□ 0.86
SNX5-214ENST00000490175 HDAC1Q13547 482 aaPredicted RBP20.45■□□□□ 0.86
SNX5-214ENST00000490175 CHL1O00533 1208 aa20.44■□□□□ 0.86
SNX5-214ENST00000490175 DCTN1Q14203 1278 aa20.44■□□□□ 0.86
SNX5-214ENST00000490175 ZBTB40Q9NUA8 1239 aa20.44■□□□□ 0.86
SNX5-214ENST00000490175 KIAA0232Q92628 1395 aa20.43■□□□□ 0.86
SNX5-214ENST00000490175 HOXC9P31274 260 aa20.43■□□□□ 0.86
SNX5-214ENST00000490175 NPM2Q86SE8 214 aaKnown RBP20.43■□□□□ 0.86
SNX5-214ENST00000490175 EYA1Q99502 592 aa20.43■□□□□ 0.86
SNX5-214ENST00000490175 ZBTB47Q9UFB7 747 aaPredicted RBP20.43■□□□□ 0.86
SNX5-214ENST00000490175 PAK3O75914 559 aaPredicted RBP20.43■□□□□ 0.86
SNX5-214ENST00000490175 C8orf58Q8NAV2 365 aa20.43■□□□□ 0.86
SNX5-214ENST00000490175 GAS2L2Q8NHY3 880 aa20.42■□□□□ 0.86
SNX5-214ENST00000490175 PDZRN3Q9UPQ7 1066 aa20.41■□□□□ 0.86
SNX5-214ENST00000490175 CRB1P82279 1406 aa20.4■□□□□ 0.86
SNX5-214ENST00000490175 HTATSF1O43719 755 aaKnown RBP20.4■□□□□ 0.86
SNX5-214ENST00000490175 LTN1O94822 1766 aa20.4■□□□□ 0.86
SNX5-214ENST00000490175 MTHFSDQ2M296 383 aaKnown RBP20.39■□□□□ 0.86
SNX5-214ENST00000490175 MCM10Q7L590 875 aa20.39■□□□□ 0.86
SNX5-214ENST00000490175 DDRGK1Q96HY6 314 aa20.39■□□□□ 0.86
SNX5-214ENST00000490175 API5Q9BZZ5 524 aaKnown RBP20.39■□□□□ 0.86
SNX5-214ENST00000490175 ABCC4O15439 1325 aa20.39■□□□□ 0.86
SNX5-214ENST00000490175 ELL2O00472 640 aaPredicted RBP20.39■□□□□ 0.85
SNX5-214ENST00000490175 ESCO1Q5FWF5 840 aa20.39■□□□□ 0.85
SNX5-214ENST00000490175 NUTM2GQ5VZR2 741 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms