RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 QTRT2Q9H974 415 aaKnown RBP15.46■□□□□ 0.07
TRIM40-208ENST00000489892 FLT4P35916 1363 aa15.46■□□□□ 0.07
TRIM40-208ENST00000489892 PXDNQ92626 1479 aa15.46■□□□□ 0.06
TRIM40-208ENST00000489892 PPM1GO15355 546 aaPredicted RBP15.45■□□□□ 0.06
TRIM40-208ENST00000489892 NEFLP07196 543 aa15.45■□□□□ 0.06
TRIM40-208ENST00000489892 COL3A1P02461 1466 aaPredicted RBP15.45■□□□□ 0.06
TRIM40-208ENST00000489892 ALS2Q96Q42 1657 aa15.44■□□□□ 0.06
TRIM40-208ENST00000489892 USP19O94966 1318 aa15.44■□□□□ 0.06
TRIM40-208ENST00000489892 SLIT3O75094 1523 aa15.44■□□□□ 0.06
TRIM40-208ENST00000489892 NEFMP07197 916 aa15.44■□□□□ 0.06
TRIM40-208ENST00000489892 ADAMTS8Q9UP79 889 aa15.44■□□□□ 0.06
TRIM40-208ENST00000489892 SOS2Q07890 1332 aaPredicted RBP15.43■□□□□ 0.06
TRIM40-208ENST00000489892 AMPHP49418 695 aa15.43■□□□□ 0.06
TRIM40-208ENST00000489892 LMOD2Q6P5Q4 547 aa15.43■□□□□ 0.06
TRIM40-208ENST00000489892 SPATA31A3Q5VYP0 1347 aa15.43■□□□□ 0.06
TRIM40-208ENST00000489892 U2AF1L5P0DN76 240 aaPredicted RBP15.42■□□□□ 0.06
TRIM40-208ENST00000489892 U2AF1Q01081 240 aaKnown RBP eCLIP15.42■□□□□ 0.06
TRIM40-208ENST00000489892 EMILIN1Q9Y6C2 1016 aa15.42■□□□□ 0.06
TRIM40-208ENST00000489892 MARF1Q9Y4F3 1742 aaKnown RBP15.42■□□□□ 0.06
TRIM40-208ENST00000489892 MAP3K19Q56UN5 1328 aa15.42■□□□□ 0.06
TRIM40-208ENST00000489892 XPCQ01831 940 aaPredicted RBP15.41■□□□□ 0.06
TRIM40-208ENST00000489892 RRS1Q15050 365 aaKnown RBP15.41■□□□□ 0.06
TRIM40-208ENST00000489892 COL22A1Q8NFW1 1626 aaPredicted RBP15.41■□□□□ 0.06
TRIM40-208ENST00000489892 PHRF1Q9P1Y6 1649 aaKnown RBP15.4■□□□□ 0.06
TRIM40-208ENST00000489892 NFAT5O94916 1531 aa15.4■□□□□ 0.06
TRIM40-208ENST00000489892 U2SURPO15042 1029 aaKnown RBP15.4■□□□□ 0.06
TRIM40-208ENST00000489892 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
TRIM40-208ENST00000489892 RUNDC1Q96C34 613 aa15.4■□□□□ 0.06
TRIM40-208ENST00000489892 USP21Q9UK80 565 aa15.4■□□□□ 0.06
TRIM40-208ENST00000489892 ABCC6O95255 1503 aa15.39■□□□□ 0.05
TRIM40-208ENST00000489892 FCHSD2O94868 740 aa15.39■□□□□ 0.05
TRIM40-208ENST00000489892 GCP02774 474 aa15.39■□□□□ 0.05
TRIM40-208ENST00000489892 PDE3BQ13370 1112 aa15.39■□□□□ 0.05
TRIM40-208ENST00000489892 NUTM2GQ5VZR2 741 aa15.39■□□□□ 0.05
TRIM40-208ENST00000489892 MAPK8IP3Q9UPT6 1336 aa15.39■□□□□ 0.05
TRIM40-208ENST00000489892 SOX12O15370 315 aa15.38■□□□□ 0.05
TRIM40-208ENST00000489892 MYT1Q01538 1121 aa15.38■□□□□ 0.05
TRIM40-208ENST00000489892 TRPC5Q9UL62 973 aaPredicted RBP15.38■□□□□ 0.05
TRIM40-208ENST00000489892 IL13P35225 146 aa15.37■□□□□ 0.05
TRIM40-208ENST00000489892 IP6K1Q92551 441 aa15.36■□□□□ 0.05
TRIM40-208ENST00000489892 LTN1O94822 1766 aa15.36■□□□□ 0.05
TRIM40-208ENST00000489892 HOXC9P31274 260 aa15.35■□□□□ 0.05
TRIM40-208ENST00000489892 ERICH6BQ5W0A0 696 aa15.35■□□□□ 0.05
TRIM40-208ENST00000489892 EP400Q96L91 3159 aa15.35■□□□□ 0.05
TRIM40-208ENST00000489892 CPDO75976 1380 aa15.35■□□□□ 0.05
TRIM40-208ENST00000489892 PEAK1Q9H792 1746 aa15.34■□□□□ 0.05
TRIM40-208ENST00000489892 FBLN1P23142 703 aa15.34■□□□□ 0.05
TRIM40-208ENST00000489892 YY1P25490 414 aa15.34■□□□□ 0.05
TRIM40-208ENST00000489892 EIF4A2Q14240 407 aaKnown RBP15.34■□□□□ 0.05
TRIM40-208ENST00000489892 ARHGEF25Q86VW2 580 aa15.34■□□□□ 0.05
TRIM40-208ENST00000489892 ATRNO75882 1429 aa15.34■□□□□ 0.05
TRIM40-208ENST00000489892 HAP1P54257 671 aaPredicted RBP15.33■□□□□ 0.04
TRIM40-208ENST00000489892 HSP90AB2PQ58FF8 381 aa15.33■□□□□ 0.04
TRIM40-208ENST00000489892 FNBP4Q8N3X1 1017 aaPredicted RBP15.33■□□□□ 0.04
TRIM40-208ENST00000489892 APAF1O14727 1248 aa15.31■□□□□ 0.04
TRIM40-208ENST00000489892 CCDC27Q2M243 656 aa15.31■□□□□ 0.04
TRIM40-208ENST00000489892 CCDC146Q8IYE0 955 aa15.31■□□□□ 0.04
TRIM40-208ENST00000489892 CRYBG1Q9Y4K1 1723 aa15.31■□□□□ 0.04
TRIM40-208ENST00000489892 RGPD1P0DJD0 1748 aa15.3■□□□□ 0.04
TRIM40-208ENST00000489892 LMOD3Q0VAK6 560 aa15.3■□□□□ 0.04
TRIM40-208ENST00000489892 TCP11L2Q8N4U5 519 aa15.3■□□□□ 0.04
TRIM40-208ENST00000489892 RSPH6AQ9H0K4 717 aa15.3■□□□□ 0.04
TRIM40-208ENST00000489892 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.29■□□□□ 0.04
TRIM40-208ENST00000489892 KDRP35968 1356 aa15.29■□□□□ 0.04
TRIM40-208ENST00000489892 IGSF1Q8N6C5 1336 aa15.29■□□□□ 0.04
TRIM40-208ENST00000489892 PRKAR2BP31323 418 aa15.29■□□□□ 0.04
TRIM40-208ENST00000489892 PLEKHF1Q96S99 279 aa15.29■□□□□ 0.04
TRIM40-208ENST00000489892 BCL9LQ86UU0 1499 aa15.28■□□□□ 0.04
TRIM40-208ENST00000489892 PLEKHG2Q9H7P9 1386 aa15.28■□□□□ 0.04
TRIM40-208ENST00000489892 CALD1Q05682 793 aaKnown RBP15.28■□□□□ 0.04
TRIM40-208ENST00000489892 FAM208AQ9UK61 1670 aaKnown RBP15.28■□□□□ 0.04
TRIM40-208ENST00000489892 ZBTB7CA1YPR0 619 aa15.27■□□□□ 0.04
TRIM40-208ENST00000489892 GOLGA2Q08379 1002 aa15.27■□□□□ 0.04
TRIM40-208ENST00000489892 SULT6B1Q6IMI4 303 aa15.27■□□□□ 0.04
TRIM40-208ENST00000489892 PRDM11Q9NQV5 511 aa15.27■□□□□ 0.04
TRIM40-208ENST00000489892 HMOX1P09601 288 aa15.26■□□□□ 0.03
TRIM40-208ENST00000489892 ZC3H6P61129 1189 aaKnown RBP15.26■□□□□ 0.03
TRIM40-208ENST00000489892 FKBP8Q14318 412 aa15.26■□□□□ 0.03
TRIM40-208ENST00000489892 WDR63Q8IWG1 891 aa15.26■□□□□ 0.03
TRIM40-208ENST00000489892 ABCA3Q99758 1704 aa15.26■□□□□ 0.03
TRIM40-208ENST00000489892 TMPOP42166 694 aaKnown RBP15.25■□□□□ 0.03
TRIM40-208ENST00000489892 NFE2L2Q16236 605 aa15.25■□□□□ 0.03
TRIM40-208ENST00000489892 CCDC125Q86Z20 511 aa15.25■□□□□ 0.03
TRIM40-208ENST00000489892 GJD4Q96KN9 370 aaPredicted RBP15.25■□□□□ 0.03
TRIM40-208ENST00000489892 EYA1Q99502 592 aa15.25■□□□□ 0.03
TRIM40-208ENST00000489892 KIAA0232Q92628 1395 aa15.24■□□□□ 0.03
TRIM40-208ENST00000489892 ERBB3P21860 1342 aa15.24■□□□□ 0.03
TRIM40-208ENST00000489892 ZNF521Q96K83 1311 aa15.24■□□□□ 0.03
TRIM40-208ENST00000489892 E9PSI1 815 aa15.24■□□□□ 0.03
TRIM40-208ENST00000489892 GAS2L2Q8NHY3 880 aa15.24■□□□□ 0.03
TRIM40-208ENST00000489892 ANKRD24Q8TF21 1146 aa15.24■□□□□ 0.03
TRIM40-208ENST00000489892 SALL2Q9Y467 1007 aaPredicted RBP15.24■□□□□ 0.03
TRIM40-208ENST00000489892 PLEKHG5O94827 1062 aa15.23■□□□□ 0.03
TRIM40-208ENST00000489892 UNC5CLQ8IV45 518 aa15.23■□□□□ 0.03
TRIM40-208ENST00000489892 WWC1Q8IX03 1113 aa15.23■□□□□ 0.03
TRIM40-208ENST00000489892 CABLES1Q8TDN4 633 aa15.23■□□□□ 0.03
TRIM40-208ENST00000489892 LTV1Q96GA3 475 aaPredicted RBP15.23■□□□□ 0.03
TRIM40-208ENST00000489892 IL16Q14005 1332 aa15.22■□□□□ 0.03
TRIM40-208ENST00000489892 MYH16Q9H6N6 1097 aa15.22■□□□□ 0.03
TRIM40-208ENST00000489892 NCAPD2Q15021 1401 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms