RNA–Protein interactions for RNA: ENST00000489856.1

CAV1-208, Transcript of caveolin 1, humanhuman

TSL 2

Gene CAV1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAV1-208ENST00000489856 ATP7BP35670 1465 aa13.56□□□□□ -0.24
CAV1-208ENST00000489856 SRPK2P78362 688 aaKnown RBP13.56□□□□□ -0.24
CAV1-208ENST00000489856 PDCD7Q8N8D1 485 aaKnown RBP13.56□□□□□ -0.24
CAV1-208ENST00000489856 ST20-MTHFSA0A0A6YYL1 179 aa13.55□□□□□ -0.24
CAV1-208ENST00000489856 HAP1P54257 671 aaPredicted RBP13.55□□□□□ -0.24
CAV1-208ENST00000489856 PSME1Q06323 249 aa13.55□□□□□ -0.24
CAV1-208ENST00000489856 PMFBP1Q8TBY8 1022 aa13.55□□□□□ -0.24
CAV1-208ENST00000489856 COLQQ9Y215 455 aaPredicted RBP13.55□□□□□ -0.24
CAV1-208ENST00000489856 ITSN1Q15811 1721 aa13.55□□□□□ -0.24
CAV1-208ENST00000489856 PXDNQ92626 1479 aa13.55□□□□□ -0.24
CAV1-208ENST00000489856 PLEKHG3A1L390 1219 aa13.54□□□□□ -0.24
CAV1-208ENST00000489856 PPP1R37O75864 691 aa13.54□□□□□ -0.24
CAV1-208ENST00000489856 KRT28Q7Z3Y7 464 aa13.54□□□□□ -0.24
CAV1-208ENST00000489856 USP47Q96K76 1375 aa13.54□□□□□ -0.24
CAV1-208ENST00000489856 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
CAV1-208ENST00000489856 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
CAV1-208ENST00000489856 SPATA31A6Q5VVP1 1343 aa13.53□□□□□ -0.24
CAV1-208ENST00000489856 DPY19L2Q6NUT2 758 aa13.52□□□□□ -0.25
CAV1-208ENST00000489856 PUS7Q96PZ0 661 aaKnown RBP13.52□□□□□ -0.25
CAV1-208ENST00000489856 TESK2Q96S53 571 aa13.52□□□□□ -0.25
CAV1-208ENST00000489856 TOPAZ1Q8N9V7 1692 aa13.52□□□□□ -0.25
CAV1-208ENST00000489856 SBNO1A3KN83 1393 aa13.51□□□□□ -0.25
CAV1-208ENST00000489856 PNPLA6Q8IY17 1366 aa13.51□□□□□ -0.25
CAV1-208ENST00000489856 POTEFA5A3E0 1075 aa13.51□□□□□ -0.25
CAV1-208ENST00000489856 XPCQ01831 940 aaPredicted RBP13.51□□□□□ -0.25
CAV1-208ENST00000489856 PPIP5K1Q6PFW1 1433 aa13.5□□□□□ -0.25
CAV1-208ENST00000489856 POLR3AO14802 1390 aaPredicted RBP13.5□□□□□ -0.25
CAV1-208ENST00000489856 ATAD2Q6PL18 1390 aa13.5□□□□□ -0.25
CAV1-208ENST00000489856 SPATA31A3Q5VYP0 1347 aa13.5□□□□□ -0.25
CAV1-208ENST00000489856 ACEP12821 1306 aa13.49□□□□□ -0.25
CAV1-208ENST00000489856 CABP1Q9NZU7 370 aa13.49□□□□□ -0.25
CAV1-208ENST00000489856 MED1Q15648 1581 aaPredicted RBP13.49□□□□□ -0.25
CAV1-208ENST00000489856 EIF4G2P78344 907 aaKnown RBP eCLIP13.48□□□□□ -0.25
CAV1-208ENST00000489856 TMF1P82094 1093 aa13.48□□□□□ -0.25
CAV1-208ENST00000489856 TSHZ2Q9NRE2 1034 aa13.48□□□□□ -0.25
CAV1-208ENST00000489856 TNS3Q68CZ2 1445 aa13.47□□□□□ -0.25
CAV1-208ENST00000489856 ARHGEF10O15013 1369 aa13.46□□□□□ -0.25
CAV1-208ENST00000489856 BRD4O60885 1362 aaPredicted RBP13.46□□□□□ -0.25
CAV1-208ENST00000489856 COL22A1Q8NFW1 1626 aaPredicted RBP13.46□□□□□ -0.25
CAV1-208ENST00000489856 CDCA8Q53HL2 280 aa13.46□□□□□ -0.25
CAV1-208ENST00000489856 TRPM3Q9HCF6 1732 aaPredicted RBP13.46□□□□□ -0.25
CAV1-208ENST00000489856 NUTM2BA6NNL0 878 aaPredicted RBP13.45□□□□□ -0.26
CAV1-208ENST00000489856 NUTM2EB1AL46 878 aaPredicted RBP13.45□□□□□ -0.26
CAV1-208ENST00000489856 NUTM2AQ8IVF1 878 aaPredicted RBP13.45□□□□□ -0.26
CAV1-208ENST00000489856 DISP3Q9P2K9 1392 aa13.45□□□□□ -0.26
CAV1-208ENST00000489856 LRP6O75581 1613 aa13.44□□□□□ -0.26
CAV1-208ENST00000489856 HSPA5P11021 654 aaKnown RBP13.44□□□□□ -0.26
CAV1-208ENST00000489856 LMOD2Q6P5Q4 547 aa13.44□□□□□ -0.26
CAV1-208ENST00000489856 L3MBTL3Q96JM7 780 aaPredicted RBP13.44□□□□□ -0.26
CAV1-208ENST00000489856 G3V3G9 751 aa13.43□□□□□ -0.26
CAV1-208ENST00000489856 MEX3CQ5U5Q3 659 aaKnown RBP13.43□□□□□ -0.26
CAV1-208ENST00000489856 BOLA1Q9Y3E2 137 aa13.43□□□□□ -0.26
CAV1-208ENST00000489856 ALS2Q96Q42 1657 aa13.43□□□□□ -0.26
CAV1-208ENST00000489856 NINLQ9Y2I6 1382 aa13.43□□□□□ -0.26
CAV1-208ENST00000489856 USP6P35125 1406 aa13.42□□□□□ -0.26
CAV1-208ENST00000489856 CPSF1Q10570 1443 aaKnown RBP13.42□□□□□ -0.26
CAV1-208ENST00000489856 TMC1Q8TDI8 760 aa13.42□□□□□ -0.26
CAV1-208ENST00000489856 SLC12A5Q9H2X9 1139 aa13.42□□□□□ -0.26
CAV1-208ENST00000489856 TERF2IPQ9NYB0 399 aa13.41□□□□□ -0.26
CAV1-208ENST00000489856 AKAP12Q02952 1782 aa13.4□□□□□ -0.26
CAV1-208ENST00000489856 HDGFL2Q7Z4V5 671 aaPredicted RBP13.4□□□□□ -0.26
CAV1-208ENST00000489856 MICALL2Q8IY33 904 aa13.4□□□□□ -0.26
CAV1-208ENST00000489856 KTN1Q86UP2 1357 aaKnown RBP13.4□□□□□ -0.26
CAV1-208ENST00000489856 SSH2Q76I76 1423 aa13.39□□□□□ -0.27
CAV1-208ENST00000489856 ADAMTS2O95450 1211 aa13.39□□□□□ -0.27
CAV1-208ENST00000489856 ABTB2Q8N961 1025 aa13.39□□□□□ -0.27
CAV1-208ENST00000489856 TTC21BQ7Z4L5 1316 aa13.39□□□□□ -0.27
CAV1-208ENST00000489856 TTC21AQ8NDW8 1320 aa13.39□□□□□ -0.27
CAV1-208ENST00000489856 CD163L1Q9NR16 1453 aa13.38□□□□□ -0.27
CAV1-208ENST00000489856 CABLES1Q8TDN4 633 aa13.38□□□□□ -0.27
CAV1-208ENST00000489856 NLRP13Q86W25 1043 aa13.37□□□□□ -0.27
CAV1-208ENST00000489856 NGLY1Q96IV0 654 aa13.37□□□□□ -0.27
CAV1-208ENST00000489856 C8orf37Q96NL8 207 aa13.37□□□□□ -0.27
CAV1-208ENST00000489856 TMEM121BQ9BXQ6 578 aaPredicted RBP13.37□□□□□ -0.27
CAV1-208ENST00000489856 RGS17Q9UGC6 210 aaPredicted RBP13.37□□□□□ -0.27
CAV1-208ENST00000489856 MON2Q7Z3U7 1717 aa13.36□□□□□ -0.27
CAV1-208ENST00000489856 MARF1Q9Y4F3 1742 aaKnown RBP13.36□□□□□ -0.27
CAV1-208ENST00000489856 A0A1W2PP64 1363 aa13.36□□□□□ -0.27
CAV1-208ENST00000489856 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
CAV1-208ENST00000489856 EDC4Q6P2E9 1401 aaKnown RBP13.36□□□□□ -0.27
CAV1-208ENST00000489856 AFF2P51816 1311 aa13.36□□□□□ -0.27
CAV1-208ENST00000489856 ANKRD36BQ8N2N9 1353 aa13.35□□□□□ -0.27
CAV1-208ENST00000489856 NUTM2GQ5VZR2 741 aa13.35□□□□□ -0.27
CAV1-208ENST00000489856 FNBP4Q8N3X1 1017 aaPredicted RBP13.35□□□□□ -0.27
CAV1-208ENST00000489856 ABCA3Q99758 1704 aa13.35□□□□□ -0.27
CAV1-208ENST00000489856 USP19O94966 1318 aa13.35□□□□□ -0.27
CAV1-208ENST00000489856 CRYBG1Q9Y4K1 1723 aa13.34□□□□□ -0.27
CAV1-208ENST00000489856 NRKQ7Z2Y5 1582 aa13.34□□□□□ -0.27
CAV1-208ENST00000489856 VSIG10Q8N0Z9 540 aa13.33□□□□□ -0.28
CAV1-208ENST00000489856 PIK3C2AO00443 1686 aa13.32□□□□□ -0.28
CAV1-208ENST00000489856 GCP02774 474 aa13.32□□□□□ -0.28
CAV1-208ENST00000489856 POTEAQ6S8J7 498 aa13.32□□□□□ -0.28
CAV1-208ENST00000489856 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.32□□□□□ -0.28
CAV1-208ENST00000489856 USP31Q70CQ4 1352 aa13.32□□□□□ -0.28
CAV1-208ENST00000489856 PHRF1Q9P1Y6 1649 aaKnown RBP13.31□□□□□ -0.28
CAV1-208ENST00000489856 FAM83GA6ND36 823 aa13.31□□□□□ -0.28
CAV1-208ENST00000489856 C11orf95C9JLR9 678 aaPredicted RBP13.31□□□□□ -0.28
CAV1-208ENST00000489856 ZEB1P37275 1124 aaPredicted RBP13.31□□□□□ -0.28
CAV1-208ENST00000489856 POLR3GLQ9BT43 218 aa13.31□□□□□ -0.28
CAV1-208ENST00000489856 USP21Q9UK80 565 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms