RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 CEBPAP49715 358 aaPredicted RBP11.31□□□□□ -0.6
CSMD2-209ENST00000489419 BRPF1P55201 1214 aaPredicted RBP11.31□□□□□ -0.6
CSMD2-209ENST00000489419 FAM161AQ3B820 660 aa11.31□□□□□ -0.6
CSMD2-209ENST00000489419 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
CSMD2-209ENST00000489419 TTC21BQ7Z4L5 1316 aa11.31□□□□□ -0.6
CSMD2-209ENST00000489419 PTPRUQ92729 1446 aa11.3□□□□□ -0.6
CSMD2-209ENST00000489419 PPM1GO15355 546 aaPredicted RBP11.3□□□□□ -0.6
CSMD2-209ENST00000489419 LMOD3Q0VAK6 560 aa11.3□□□□□ -0.6
CSMD2-209ENST00000489419 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
CSMD2-209ENST00000489419 EMILIN1Q9Y6C2 1016 aa11.3□□□□□ -0.6
CSMD2-209ENST00000489419 IGHDP01880 384 aa11.3□□□□□ -0.6
CSMD2-209ENST00000489419 MVPQ14764 893 aaKnown RBP11.3□□□□□ -0.6
CSMD2-209ENST00000489419 DZIP1LQ8IYY4 767 aaKnown RBP11.3□□□□□ -0.6
CSMD2-209ENST00000489419 TSR2Q969E8 191 aaKnown RBP11.3□□□□□ -0.6
CSMD2-209ENST00000489419 PIK3R4Q99570 1358 aa11.3□□□□□ -0.6
CSMD2-209ENST00000489419 FER1L4A9Z1Z3 1794 aa11.3□□□□□ -0.6
CSMD2-209ENST00000489419 IPO8O15397 1037 aaKnown RBP11.29□□□□□ -0.6
CSMD2-209ENST00000489419 RLBP1P12271 317 aa11.29□□□□□ -0.6
CSMD2-209ENST00000489419 AMOTL2Q9Y2J4 779 aa11.29□□□□□ -0.6
CSMD2-209ENST00000489419 ACEP12821 1306 aa11.29□□□□□ -0.6
CSMD2-209ENST00000489419 TULP1O00294 542 aaPredicted RBP11.29□□□□□ -0.6
CSMD2-209ENST00000489419 RWDD1Q9H446 243 aaPredicted RBP11.29□□□□□ -0.6
CSMD2-209ENST00000489419 SMC4Q9NTJ3 1288 aa11.29□□□□□ -0.6
CSMD2-209ENST00000489419 NRKQ7Z2Y5 1582 aa11.29□□□□□ -0.6
CSMD2-209ENST00000489419 TTC21AQ8NDW8 1320 aa11.29□□□□□ -0.6
CSMD2-209ENST00000489419 KIF16BQ96L93 1317 aa11.29□□□□□ -0.6
CSMD2-209ENST00000489419 NCKAP5LQ9HCH0 1330 aa11.29□□□□□ -0.6
CSMD2-209ENST00000489419 USP6P35125 1406 aa11.29□□□□□ -0.6
CSMD2-209ENST00000489419 GNAI1P63096 354 aa11.28□□□□□ -0.6
CSMD2-209ENST00000489419 SSH1Q8WYL5 1049 aa11.28□□□□□ -0.6
CSMD2-209ENST00000489419 DDRGK1Q96HY6 314 aa11.28□□□□□ -0.6
CSMD2-209ENST00000489419 ZRANB1Q9UGI0 708 aa11.28□□□□□ -0.6
CSMD2-209ENST00000489419 USP31Q70CQ4 1352 aa11.28□□□□□ -0.6
CSMD2-209ENST00000489419 OVOS2A0A0J9YW53 1432 aa11.28□□□□□ -0.6
CSMD2-209ENST00000489419 OVOS2Q6IE36 1432 aa11.28□□□□□ -0.6
CSMD2-209ENST00000489419 SSH2Q76I76 1423 aa11.28□□□□□ -0.6
CSMD2-209ENST00000489419 FBLN1P23142 703 aa11.28□□□□□ -0.6
CSMD2-209ENST00000489419 ATF7IPQ6VMQ6 1270 aa11.28□□□□□ -0.6
CSMD2-209ENST00000489419 FTSJ3Q8IY81 847 aaKnown RBP11.28□□□□□ -0.6
CSMD2-209ENST00000489419 SLC26A8Q96RN1 970 aa11.28□□□□□ -0.6
CSMD2-209ENST00000489419 IFT57Q9NWB7 429 aa11.28□□□□□ -0.6
CSMD2-209ENST00000489419 PHACTR3Q96KR7 559 aa11.27□□□□□ -0.6
CSMD2-209ENST00000489419 DDX19BQ9UMR2 479 aa11.27□□□□□ -0.6
CSMD2-209ENST00000489419 ZNF853P0CG23 659 aa11.27□□□□□ -0.61
CSMD2-209ENST00000489419 BCL2L13Q9BXK5 485 aa11.27□□□□□ -0.61
CSMD2-209ENST00000489419 C8orf34Q49A92 452 aa11.26□□□□□ -0.61
CSMD2-209ENST00000489419 PCDHB15Q9Y5E8 787 aa11.26□□□□□ -0.61
CSMD2-209ENST00000489419 HMOX1P09601 288 aa11.26□□□□□ -0.61
CSMD2-209ENST00000489419 TRIM27P14373 513 aa11.26□□□□□ -0.61
CSMD2-209ENST00000489419 SKAP1Q86WV1 359 aa11.26□□□□□ -0.61
CSMD2-209ENST00000489419 ARHGAP45Q92619 1136 aa11.26□□□□□ -0.61
CSMD2-209ENST00000489419 ANKARQ7Z5J8 1434 aa11.25□□□□□ -0.61
CSMD2-209ENST00000489419 RRS1Q15050 365 aaKnown RBP11.25□□□□□ -0.61
CSMD2-209ENST00000489419 CHMP4BQ9H444 224 aaKnown RBP11.25□□□□□ -0.61
CSMD2-209ENST00000489419 NALCNQ8IZF0 1738 aa11.25□□□□□ -0.61
CSMD2-209ENST00000489419 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
CSMD2-209ENST00000489419 RGS3P49796 1198 aa11.25□□□□□ -0.61
CSMD2-209ENST00000489419 CFAP44Q96MT7 982 aa11.25□□□□□ -0.61
CSMD2-209ENST00000489419 TNNQ9UQP3 1299 aa11.25□□□□□ -0.61
CSMD2-209ENST00000489419 XRN1Q8IZH2 1706 aaKnown RBP11.24□□□□□ -0.61
CSMD2-209ENST00000489419 HDAC1Q13547 482 aaPredicted RBP11.24□□□□□ -0.61
CSMD2-209ENST00000489419 NOB1Q9ULX3 412 aaKnown RBP11.24□□□□□ -0.61
CSMD2-209ENST00000489419 NPM2Q86SE8 214 aaKnown RBP11.24□□□□□ -0.61
CSMD2-209ENST00000489419 RIMS1Q86UR5 1692 aaKnown RBP11.23□□□□□ -0.61
CSMD2-209ENST00000489419 VAMP4O75379 141 aa11.23□□□□□ -0.61
CSMD2-209ENST00000489419 EIF4A2Q14240 407 aaKnown RBP11.23□□□□□ -0.61
CSMD2-209ENST00000489419 HAP1P54257 671 aaPredicted RBP11.23□□□□□ -0.61
CSMD2-209ENST00000489419 CEP170BQ9Y4F5 1589 aaPredicted RBP11.22□□□□□ -0.61
CSMD2-209ENST00000489419 CHMP4AQ9BY43 222 aa11.21□□□□□ -0.61
CSMD2-209ENST00000489419 ZBTB40Q9NUA8 1239 aa11.21□□□□□ -0.61
CSMD2-209ENST00000489419 KIF24Q5T7B8 1368 aa11.21□□□□□ -0.61
CSMD2-209ENST00000489419 TRHP20396 242 aaPredicted RBP11.21□□□□□ -0.61
CSMD2-209ENST00000489419 NGDNQ8NEJ9 315 aaKnown RBP11.21□□□□□ -0.61
CSMD2-209ENST00000489419 ITPRIPQ8IWB1 547 aa11.2□□□□□ -0.62
CSMD2-209ENST00000489419 MRPL50Q8N5N7 158 aaKnown RBP11.2□□□□□ -0.62
CSMD2-209ENST00000489419 MBIPQ9NS73 344 aa11.2□□□□□ -0.62
CSMD2-209ENST00000489419 PDZRN3Q9UPQ7 1066 aa11.2□□□□□ -0.62
CSMD2-209ENST00000489419 LAS1LQ9Y4W2 734 aaKnown RBP11.2□□□□□ -0.62
CSMD2-209ENST00000489419 ARHGEF10O15013 1369 aa11.2□□□□□ -0.62
CSMD2-209ENST00000489419 SULT6B1Q6IMI4 303 aa11.2□□□□□ -0.62
CSMD2-209ENST00000489419 TMEM57Q8N5G2 664 aa11.2□□□□□ -0.62
CSMD2-209ENST00000489419 SBNO1A3KN83 1393 aa11.2□□□□□ -0.62
CSMD2-209ENST00000489419 RGPD1P0DJD0 1748 aa11.2□□□□□ -0.62
CSMD2-209ENST00000489419 FLT4P35916 1363 aa11.19□□□□□ -0.62
CSMD2-209ENST00000489419 BRD2P25440 801 aaKnown RBP11.19□□□□□ -0.62
CSMD2-209ENST00000489419 ANKLE2Q86XL3 938 aa11.19□□□□□ -0.62
CSMD2-209ENST00000489419 DLG5Q8TDM6 1919 aa11.19□□□□□ -0.62
CSMD2-209ENST00000489419 NUTM2FA1L443 756 aa11.19□□□□□ -0.62
CSMD2-209ENST00000489419 SMC5Q8IY18 1101 aa11.19□□□□□ -0.62
CSMD2-209ENST00000489419 DHX37Q8IY37 1157 aaKnown RBP11.19□□□□□ -0.62
CSMD2-209ENST00000489419 KCNA6P17658 529 aa11.18□□□□□ -0.62
CSMD2-209ENST00000489419 TWISTNBQ3B726 338 aaPredicted RBP11.18□□□□□ -0.62
CSMD2-209ENST00000489419 VIRMAQ69YN4 1812 aaKnown RBP11.18□□□□□ -0.62
CSMD2-209ENST00000489419 PEAK1Q9H792 1746 aa11.18□□□□□ -0.62
CSMD2-209ENST00000489419 HSP90AB2PQ58FF8 381 aa11.18□□□□□ -0.62
CSMD2-209ENST00000489419 THUMPD2Q9BTF0 503 aaKnown RBP11.18□□□□□ -0.62
CSMD2-209ENST00000489419 MAP3K19Q56UN5 1328 aa11.18□□□□□ -0.62
CSMD2-209ENST00000489419 KDRP35968 1356 aa11.17□□□□□ -0.62
CSMD2-209ENST00000489419 KIAA0232Q92628 1395 aa11.17□□□□□ -0.62
CSMD2-209ENST00000489419 USP54Q70EL1 1684 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms